Mannheimia varigena USDA-ARS-USMARC-1312: X874_16470
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Entry
X874_16470 CDS
T03028
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00470
D-Amino acid metabolism
mvg00550
Peptidoglycan biosynthesis
mvg01100
Metabolic pathways
mvg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X874_16470
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X874_16470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
X874_16470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
X874_16470
Enzymes [BR:
mvg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
X874_16470
Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
Precursor biosynthesis
Amino acid ligase
X874_16470
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
RimK
CPSase_L_D2
ATPgrasp_ST
GARS_A
ATPgrasp_Ter
Calmod_bind_C
ATP-synt_F
TTL
Motif
Other DBs
NCBI-ProteinID:
AHG78281
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All DBs
Position
1776625..1777536
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AA seq
303 aa
AA seq
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MSIKNEKIAVLFGGVSQEREVSLNSGAAVTEALRSLGYNVEGIDTKEFPIEKLKEKGIQR
VFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFRTKLLWNAVGLPTADMVVV
QRGQAVDFDEIIAKLGLPVFVKPSCEGSSVGVFKVKTKEELEPAIHEALKFDSIVLVEEF
LAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDNTQYVVPALNDERQAEVAQLVKA
AYDVVGCRGWSRVDVMEDGNGKFRLVEVNTNPGMTSHSIFPKSAATVGISFEKLVEKVLE
LSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaaaacgaaaaaattgcggtattatttggcggtgtttcgcaagaacgtgaa
gtttcacttaattcaggtgctgcagtaacagaagcattaagaagtttaggctataatgtt
gaaggtattgataccaaagaattcccgattgaaaaattaaaagaaaaaggcattcaacgt
gtatttaatattttacacggtggcattggcgaaaacggcgtgctacaaggtgcattagag
caaatgggaattccttatacaggctgcggcgtgatggcatcagcggtaacactagataaa
ttccgcaccaaattattatggaatgcagtaggtttaccaacagcagatatggtggtagtt
caacgtggacaagcggtcgattttgatgaaattattgcaaaattaggcttacctgtattt
gtgaaaccttcttgtgaaggctcaagcgtgggggttttcaaagtaaaaaccaaagaagaa
ctagagcctgcaattcatgaagcattaaaatttgactctatagtattagtagaagaattt
ttagcgggtaatgaatactctgtaccggtgttagatggtcaagttttacctgcggttcaa
gtgatcccggatggtgaattttatgactaccatgccaaatatgtgtctgataatacgcaa
tatgttgtgccagcattaaatgatgagcgccaagctgaagtcgcacaattagtgaaagct
gcttacgatgtggttggttgtcgtggttggagccgtgtcgatgtgatggaagatggtaat
ggcaaattccgtttagtggaagtaaatactaacccaggtatgacaagccacagtattttc
cccaaatcggcagcaacagttggtatttcatttgaaaaacttgtagagaaagtgttggag
ttaagtgcttaa
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