Mannheimia varigena USDA-ARS-USMARC-1312: X874_19590
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Entry
X874_19590 CDS
T03028
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvg03009
]
X874_19590
Enzymes [BR:
mvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
X874_19590
Ribosome biogenesis [BR:
mvg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
X874_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_5
Methyltransf_12
AtzG-like
Methyltransf_11
TrkA_N
Methyltransf_15
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
AHG78592
LinkDB
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Position
complement(2093393..2094727)
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AA seq
444 aa
AA seq
DB search
MAFLFMKKQSTKALSSRAVSATIILQVLDQGKSLSTLIPEAQKQLEPKDLPLVQEITFGV
CRVLPRLESIIKLLIEKPLKGKTRLVHCLLLVGLYQLLYMRVPPHAAVDEVVNATKALKL
DSFRALTNGVLRRFLREQDEILAKVDKHWQTLHPEWLVNKLKKAYPHWREIVEANNQRPP
MWIRVNQQHIKAKDYAVLLGDLVAKNPQNMTACSPHCALLLDKPVGVNQLHNFEQGWATV
QDVHAQWSAELLGAENGELILDACAAPGGKTTHILEKAPNAKVIALDIEESRLNRVRENL
ARLQQTATVICGDASKPEEWLEEGMMFERILLDAPCSATGVIRRHPDIKWLRQENDIAEL
AELQGKILNSLWNRLKPNGILLYSTCSVLPEENSEQIQRFVQTMPNAKLVEMDFNGEKVL
EKQFFPQHNGGDGFFYAKLQKVAS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttatttatgaaaaaacaatctacaaaagcactttcttctcgagcagtaagt
gcaactattattttacaagtgctagatcaagggaaatcgctctcaacccttattccagaa
gcccaaaagcagcttgagccaaaagatttacccttggtacaagaaattacctttggtgtg
tgccgagtattgcctcgtttagagtcgatcatcaaattattgatagagaaaccgcttaaa
ggtaaaactcgtttagtgcattgcttattgttggtggggttatatcaattactttatatg
cgagtgccacctcacgctgcggtagatgaagtggtgaatgccactaaagcgttaaagcta
gacagcttccgagccttaaccaacggtgtacttcgtcgtttcttgcgtgagcaggacgaa
attttggcaaaggtagataaacattggcaaacactacaccctgaatggctagtgaataag
ctgaaaaaagcttatccgcattggcgtgagattgtggaggcgaataaccaacgtccaccg
atgtggattcgggtcaatcagcaacatatcaaagcaaaagactatgcagtattacttggc
gatttagttgcaaaaaatccgcaaaatatgaccgcttgtagccctcattgtgccttgctg
ttagataaaccagtcggtgtaaatcaattacataatttcgaacaaggttgggcaacagtg
caagatgttcacgctcagtggtcggcggaattgttgggggcggaaaatggcgaactgatt
ttagacgcttgtgctgcgccgggcggaaaaaccacccatattttagaaaaggccccgaat
gcaaaagtgattgctttagatatcgaagaaagccgcttaaaccgagtgcgagaaaattta
gcaagacttcagcaaactgcaaccgtgatttgtggtgatgcgtctaaaccagaggaatgg
ctcgaagaaggaatgatgttcgagcgtattttattagatgccccttgctcagcaacaggg
gttattcgtcgtcaccctgatattaaatggttacgccaagaaaatgatattgctgaattg
gcagaacttcagggcaagattctcaattcgttgtggaataggctcaaacctaatggcatt
ttgctgtattcaacttgttccgtgctacctgaggaaaatagcgaacaaattcaacgcttt
gtgcaaacaatgccaaatgcaaaattagtggaaatggattttaatggcgaaaaggtattg
gaaaaacagtttttccctcaacacaatggtggcgatggcttcttctatgcaaaattacaa
aaagtggcaagttag
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