Mannheimia varigena USDA-ARS-USMARC-1312: X874_2960
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Entry
X874_2960 CDS
T03028
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvg03016
]
X874_2960
Enzymes [BR:
mvg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
X874_2960
Transfer RNA biogenesis [BR:
mvg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
X874_2960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Lipase_GDSL
Amdase
Motif
Other DBs
NCBI-ProteinID:
AHG76934
LinkDB
All DBs
Position
314681..316108
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AA seq
475 aa
AA seq
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MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLLLNTCSIREKAQEKVFS
QLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVFGPQTLHRLPEMINQIRGG
KSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYCSFCVVPYTRGEEVSRPVDDV
LFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFAELLRLVAAIDGIDRLRYTTSHP
IEFSDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLREVRPDIQ
ISSDFIVGFPGETAEDFEQTMKIIEQVNFDMSFSFIYSARPGTPAADLPDNVSEDEKKER
LSRLQQRINHQAMQFSRAMLGTEQRILVEGPSKKDLMELTGRTETNRVVNFVGTPDMIGK
FVDVKITDVYTNSLRGEVIRTEEDMGLRVVESAESVIARTRKEDELGVGKYVVNL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattacatattaccacttggggctgccaaatgaatgagtacgactcatcaaaa
atggcagatttactcaattctacacacggttttgagctcactgaaaatccggaagatgca
gatgttttattactgaatacttgttctattcgtgaaaaagcacaagaaaaagtattctca
cagcttggtcgttggaaaaactggaaaaaagacaaaccaaacctaatcattggtgtgggc
ggttgtgttgcctcgcaagaaggagagcatattcgtgatcgtgctccttatgttgatatt
gtattcggaccgcaaaccctacatcgtttacctgaaatgattaaccaaattcgtggcggt
aaaagctcgattgtggatatttctttcccagaaatcgaaaaatttgatcgcttgccagaa
ccaaaagccgaaggcccaactgcttttgtatcaattatggaaggttgtaacaagtactgc
tcgttctgcgtggtgccttacacccgtggcgaagaggtttcacgcccagttgatgatgta
ttatttgaaattgcacaacttgcagcacagggcgtgcgtgaagttaatttacttggtcaa
aacgtaaatgcgtatcgtggcgaaacctttgatggcggtatttgcacattcgcagaatta
ctgcgtttagtggcagcgattgacggtattgaccgcttgcgttataccacgagccaccca
attgaatttagcgatgatattatcgaagtttatcgcgatacgcctgaattagtgagcttc
ttacacttaccaattcaaagcggttcagaccgtgtattaacaatgatgaaacgtaaccac
acggcattagagtataaagcgattatccgcaaactacgtgaagttcgtcctgacattcaa
atcagctcagattttattgtcggcttcccgggcgaaacagcggaagattttgagcaaaca
atgaaaatcatcgagcaagtaaactttgatatgagttttagctttatctattcggctcgc
cctggcacgccggcggcggatctgcctgataatgtttcagaagatgagaaaaaagagcgt
ttatcacgcctacaacagcgtattaaccaccaagcaatgcagtttagccgagcgatgctc
ggcacggaacagcgcattttggttgaaggtccatcgaaaaaagatttaatggagcttaca
gggcgtacagaaaccaatcgtgtggtgaacttcgtgggtacgccggatatgattggcaag
ttcgttgatgtgaaaattacggatgtttacaccaactccctgcgtggcgaggtaatccgc
acggaagaagatatgggattacgggtggtagaatcggctgaaagtgttattgcccgtacc
cgtaaagaagatgagttaggtgttggcaaatacgttgtcaatctgtaa
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