KEGG   Methanococcus vannielii: Mevan_0293
Entry
Mevan_0293        CDS       T00554                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mvn  Methanococcus vannielii
Pathway
mvn03030  DNA replication
mvn03410  Base excision repair
mvn03420  Nucleotide excision repair
mvn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mevan_0293
   03410 Base excision repair
    Mevan_0293
   03420 Nucleotide excision repair
    Mevan_0293
   03430 Mismatch repair
    Mevan_0293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvn03032]
    Mevan_0293
   03400 DNA repair and recombination proteins [BR:mvn03400]
    Mevan_0293
Enzymes [BR:mvn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mevan_0293
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mevan_0293
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mevan_0293
DNA replication proteins [BR:mvn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mevan_0293
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mevan_0293
DNA repair and recombination proteins [BR:mvn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mevan_0293
   NER (nucleotide excision repair)
    Other NER factors
     Mevan_0293
   MMR (mismatch excision repair)
    Other MMR factors
     Mevan_0293
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Arc_PepC RNA_ligase Apo-VLDL-II
Other DBs
NCBI-ProteinID: ABR54202
UniProt: A6UNY0
LinkDB
Position
343983..345704
AA seq 573 aa
MLFNEFCKIIEKIENTPKRLEKIDYFVEIIDFVKNHGKPENLKEICQVSIGRVFAEYENR
EIGIGPNLLIEAIKTTGISENDLNLKIKETGDIGISVEHLSSKIKQISLFNEPLTFEEVY
STIKKLSTIEGTSSQKKKIRIISNLLIIANPIESRYISRLILEDMRIGMNIPTILAAFSN
YFGIEKEKIEKVYAVTNDIGLIGKKLLENSNFEEDPELNLTVFRPIKPMLAQLTPSIEEA
VIEMKNPQFETKYDGARVQVHKSNGEVKIYSRRLEDITNSVPELVLEIKNLEVDNVILEG
ECVAMNLENGKPRPFQDILRRFRRKYDIDKMTEEVSLRIYFFDILYHNKGLIDLPLFERR
NILENIFGTNNWDLELKKIENEIKSNKMLFTSFKVSSTDLKIAKEFFKWSLSIGHEGIMV
KNLNAIYTPGSRVKTMCKIKQTLENLDVVVTRAKIGMGKRKDWYGSYEISVKGDDESLHV
IGNVGSGLTEEDLEKLTKIANEIKIEDLGGEVILEPKIVLEVTYEEIQTSEKYEMGYALR
FPRVVGIREDKSINDINSLDDVKKIYEIERKRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttttaatgaattttgtaaaataattgaaaaaattgaaaatactccaaaaagactt
gaaaaaatagattattttgttgaaataattgattttgttaaaaatcatggaaaacctgaa
aatttaaaagagatttgtcaggtatccattggaagagtatttgcagaatatgaaaatagg
gagataggaataggcccaaacttacttattgaagccattaaaacaacgggaatttctgaa
aatgatttaaatttaaagataaaagaaactggtgacattggaatttcagttgaacattta
agttcaaaaataaagcaaatttcattgtttaatgaacctttgacctttgaagaagtttat
tctacaataaaaaagttatcaactattgaaggaacttcttcacaaaagaaaaagattaga
ataatttcaaatctcctgattatagcaaatcctatcgaatcaagatacatttcaagatta
attttggaagatatgcgaattgggatgaatattccaacgattttagcagcgttttcaaat
tattttgggattgaaaaggaaaaaatagaaaaagtatatgctgttacaaatgatataggg
ctcattggtaaaaagttacttgaaaattcaaattttgaagaagatcctgaactaaatctt
actgtttttaggccaataaagcccatgcttgcacaattaacgccttcaattgaagaagca
gttattgaaatgaaaaatcctcaatttgaaactaaatacgatggagcaagagttcaagta
cataaatcaaatggtgaagtaaaaatatacagtcgaaggcttgaagacattacaaattcc
gttccagaactagttttagagattaaaaacttagaagtagataatgtaattttagagggg
gaatgtgttgccatgaaccttgaaaacggtaagccaaggccttttcaagatattttaaga
cgttttaggaggaaatatgacattgataaaatgactgaagaagtaagtttgagaatatat
tttttcgacattttataccacaataaaggattaattgatttacctttgtttgaaagaaga
aatattttggaaaacatttttggaactaataattgggatttggaacttaaaaaaatagaa
aatgaaataaaatctaacaaaatgctttttacatcgtttaaagtaagcagcactgaccta
aaaattgcaaaggaattttttaaatggagcttaagtattggacatgaaggaatcatggtg
aaaaatttaaatgcaatttatactcctggaagtcgtgtaaaaacaatgtgtaagattaaa
cagactttagaaaaccttgatgttgttgtaactcgtgcaaaaataggaatgggtaaaaga
aaggactggtatgggtcgtatgaaatttcagttaagggtgacgacgaaagcttacacgtt
attgggaatgttggaagcggacttaccgaagaagatttagaaaaacttacaaaaatcgct
aatgaaataaaaatagaggatttaggtggagaagttatacttgaaccaaaaatagttcta
gaggtaacttatgaagaaattcaaacttcagaaaaatatgaaatgggctatgcacttaga
tttccaagggttgttggaataagagaagacaaatctataaatgacattaactcattagat
gatgtgaagaaaatatacgaaatagaacgaaaaagaaaatag

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