KEGG   Methanocaldococcus vulcanius: Metvu_1663
Entry
Metvu_1663        CDS       T01105                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mvu  Methanocaldococcus vulcanius
Pathway
mvu03030  DNA replication
mvu03410  Base excision repair
mvu03420  Nucleotide excision repair
mvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metvu_1663
   03410 Base excision repair
    Metvu_1663
   03420 Nucleotide excision repair
    Metvu_1663
   03430 Mismatch repair
    Metvu_1663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvu03032]
    Metvu_1663
   03400 DNA repair and recombination proteins [BR:mvu03400]
    Metvu_1663
Enzymes [BR:mvu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Metvu_1663
    6.5.1.6  DNA ligase (ATP or NAD+)
     Metvu_1663
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Metvu_1663
DNA replication proteins [BR:mvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metvu_1663
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metvu_1663
DNA repair and recombination proteins [BR:mvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metvu_1663
   NER (nucleotide excision repair)
    Other NER factors
     Metvu_1663
   MMR (mismatch excision repair)
    Other MMR factors
     Metvu_1663
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: ACX73516
UniProt: C9RDY7
LinkDB
Position
complement(1667554..1669275)
AA seq 573 aa
MLWKDVCEIFDKIENTTKRLEKRDYFIKLIDLVKEKGKPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAITSMGIKKEELLEKIKETGDIGFAVEQLKSKTKQLSLLLSPLTVDDVY
ETLKRVGEIEGEGSQKKKLRLISSLFMRASPIECRYLARLILEDMRLGMNVPTILDALSV
YFNVPKEKLEKIYAITNDIGLLAEKLIKNELESEDLKLKLFRPIKPMLAQLAPSIEEALL
EMGKAQFETKYDGARVQIHKGGDKVKIYSRRLEDVTNALPEIVDAIKKINVEELIVEGEC
VAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDILYKNGTSLIDEEFEKRRK
ELEDIVGYENDWRTERERIERELKSDKIVDISYKLVSDDPKEAREFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLESLDVVITKAKRGMGKRKDWYGSFEICVKDEEGNLYP
IGYVGTGLSEADLEMLKEEIDKIIKRDLGEEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGKDDINTVKDVERIYEIQRGRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttggaaagatgtttgtgagatatttgataaaatagaaaatacaacaaaacggtta
gagaaaagagattatttcattaaattaatagatcttgttaaagaaaaaggaaaaccagaa
gatttaaagaaaatatgttatatggccattggaagagtatatcctgaatatgacgaaagg
gaacttggcattggagaaaaactactaataaatgcaataacttcgatgggaattaaaaaa
gaggaattattagaaaaaattaaagagacaggagatattgggtttgcagtagaacagtta
aaatcaaaaacaaaacagttatctttgcttctatctcctttaactgtggatgacgtttat
gaaaccttaaaaagagttggagaaattgaaggagagggctctcaaaagaagaaattaaga
ttaataagtagtttgtttatgagggcctctccaatagagtgtagatacttagcgagattg
attttagaagatatgcgactcggtatgaatgttcctacgatacttgatgccctatccgtt
tacttcaacgttccaaaggaaaagttggagaagatatatgctataacgaatgacattgga
ctattggctgaaaaattaattaaaaatgagttagaaagtgaggacttgaagttaaaacta
tttaggccgataaaaccaatgctggcacaattagccccttcaattgaggaggcattattg
gagatgggaaaagcccaatttgagacgaaatatgatggagcgagagttcaaattcacaaa
ggaggggataaagttaagatatacagtagaagattggaagatgttacaaatgctcttcca
gaaattgtggatgcaatcaaaaagataaatgttgaggaattgatagtagaaggggagtgt
gttgcaatagataaacaaacaggaaaaccaaggcctttccaagacattcttaggagattt
agaaggaaatatgacattggaaagatgatgaaagaaataaatttgagagtttatttattt
gatattctctataaaaacggaacatctttgatagatgaggaatttgaaaaaagaagaaaa
gaattagaagatattgtaggttatgaaaacgattggaggacagaacgggaaagaatagaa
cgagagttaaaatctgacaagattgtggatatttcctacaaattagttagtgatgatcca
aaggaagcaagagagttttacaattggagtttatcaatcggacatgagggagttatgata
aaaaacttaaaagccccttacactccaggtagtagagttagaacaatgtataaatttaaa
ccaactcttgaaagtttggatgttgttataacaaaggcaaagagaggaatgggaaagagg
aaagattggtatggatcgtttgaaatatgcgttaaagatgaagaagggaatttatatccg
ataggttatgttggaactggattaagtgaagcggatttggaaatgttaaaagaggaaatt
gacaaaataataaaaagagatctcggagaggaggttgaagttgaaccaaaaattgttatt
gaagttgcttatgaagaaattcagaaatcagataagtatccatgtggttatgccctaagg
tttccaagggttgtaagatttagatttgataagggaaaggatgatataaacactgtaaaa
gatgtggaaagaatttatgagatacagagaggtagaaagtga

DBGET integrated database retrieval system