Myotis brandtii (Brandt's bat): 102256356
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Entry
102256356 CDS
T02920
Symbol
COL27A1
Name
(RefSeq) collagen type XXVII alpha 1 chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb04820
Cytoskeleton in muscle cells
myb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102256356 (COL27A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102256356 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
myb00536
]
102256356 (COL27A1)
Glycosaminoglycan binding proteins [BR:
myb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102256356 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
102256356
NCBI-ProteinID:
XP_014384373
LinkDB
All DBs
Position
Un
AA seq
1851 aa
AA seq
DB search
MRITWALKTQTPVRTPGPRARVSRQRSGEAAAAAHGPHLEERGAGPTDHGGQCGAEGFLF
TWILVSFACHLASTQEAPEDVDVLQRLGLSWTKAAGGRSPPPPGVIPFQSGFIVTQRARL
QAPTTAIIPAALGTELALVLSLCSHRVNHAFLFAVRSRKHKLQLGLQFLPGKTVVHLGPR
RSVAFDLDPPGPVPLAFHRDPALDPEGSFLFGRMSPHAVQFEGALCQFSIYPVTQVAHNY
CTHLRRPCGQADMYRPQPGPLLPRDSGAPFAFQTDLALLGLGNLTTAMPALGSRPAGRGP
RGTVVPPTPTKPLRTSTTDPHRRVSVGDPARTPLPPAKLSASQVLPPVPRAPAASSPTPV
QSLQKSTATKTPKSHPTKPAAPSPPIAPVKSPRPAQKAALPSSRKSAPPTKKPVPPTLHP
VPAQVSRLTGKPVQRNPVTPRPPPPSARPLPPAAGASKKPFLPVVQTEAKMSSRASEPAP
ARTSTHRPPQPTVLPPSSAPSPGSTRTTRPLATAMPPTLTPGLVPTGSKKPTGSEATKKA
RPKKPVPLRPGKASRDVPISDPTTGPTPSQPRPGRQTTPAPALAQARFLSSSPWPTSSGY
SFFHLVGPTPFPLLMGPPGPKGDCGFPGPPGLPGLPGPPGARGPRGPPGPHGNPGLPGPP
GAKGQKGDPGLSPGKAHDGTKGDMGLPGLPGDPGPLGRKGYKGYPGPAGHPGEQGRPGPE
GSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRP
GFPGDFGERGPPGLDGNPGELGLPGPPGVPGLIGDVGTLGPIGYPGPKGMKGLMGNVGEP
GLKGDKGEQGVPGVSGDAGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPE
GFPGDIGPPGDNGPEGVKGKPGARGLPGPPGQLGPEGDEGPMGPPGAPGLEGQPGRKGFP
GRPGPDGLKGEPGNPGRPGPVGEQGLLGFVGLVGEPGIVGEKGDRGMMGPPGAPGPKGSM
GHPGTPGGVGTPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQ
GRLGQPGQQGAAGERGHLGARGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPK
GPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDA
GPDGERGEKGQEGLMGEDGPPGPPGITGVRGPEGKPGKQGQKGRTGAKGAKGYQGQLGEM
GAPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIAGPLGPPGPKGEK
GEQGEDGKAEGPPGPPGDPGPVGDRGDRGEPGDPGYPGQEGVPGLCGNAGQQGLPGHPGP
RGRPGPKGSKGEEGPKGKQGKAGPPGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGR
DGRPGQQGEQGADGTPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGT
EGGTGLPGNQGEPGSKGQPGDSGQMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGK
EGIIGPLGILGPSGRPGPKGDKGSQGNMGLQGPRGPPGPRGRPGPPGPPGRPIHFQQDDL
GAAFQTWMDTHGALRAEVSSHPDRLVLDQGGEIFKTLHYLSHLIQSIKTPLGTKENPARV
CRDLMDCEQKMADGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAVSRVQM
NFLHLLSSEVTQHITIHCLNMTVWQEGPGQAPAKRAVRFRAWNGQIFEAGGQFRPEVSMD
GCKVQDGRWQQTLFTFRTQDPQQLPIVSVDNLPPASSGKQYRLEVGPACFL
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcacctgggcgctcaagacacagactccagtacgaacacctggacccagagcc
cgcgtgtctcgccagcgctcaggtgaagctgctgctgcggcgcacggaccacacttggag
gagcggggtgcaggcccaactgaccacggaggacagtgcggcgcagaggggtttctcttc
acctggatcttagtctcattcgcctgtcacctggcctccacccaagaagctcctgaagat
gtggacgtcctccagcggctgggcctcagctggaccaaggcagcgggcggccggagcccc
ccacccccaggggtcatcccattccagtcgggcttcatcgttacgcagcgggcccggctc
caggcccccacgaccgccatcatccctgccgccctgggcacagagctggcgctggtgctg
agcctctgctcccatcgggtgaaccatgccttccttttcgccgtccgcagccggaagcac
aagctgcagctgggcctgcagttcctccccggcaagacggtcgtccacctgggaccccgg
cgttccgtggccttcgacctggaccccccggggcctgtcccgctggctttccacagggac
cccgcgctggaccccgagggctccttcctctttgggaggatgagcccgcacgcggtccag
ttcgaaggcgccctgtgccagttcagtatctaccctgtgacgcaggtcgctcacaattac
tgcacccacctgaggcggccgtgtggacaggccgacatgtaccggccccagccgggaccc
ctcctcccccgggactcgggcgcaccctttgccttccagactgacctagccctgctcggc
ctggggaacctgaccactgccatgccagccctgggctcgcggccagcaggcaggggaccc
agagggacggtggtgccccccacacctaccaagcccctaaggactagcaccacagaccct
cacaggcgtgtctcagtgggagacccagcccggaccccgctgccacctgccaagctgtca
gcgagccaagtgcttcctcccgtgccccgagcccctgctgcgagctcccccacacctgtc
cagtccttgcagaagagcacagccaccaaaacccccaagagccacccaaccaagcctgca
gccccttctcctcccattgcccctgtcaaaagcccccgccccgcccagaaggcagctctc
ccttcctcgagaaagtcagcccctcccaccaagaagccagtgccacccactctccaccca
gtccctgcccaagtgtcccgtctcacagggaagccggtccagaggaaccctgtgacgccc
cgacccccacctcccagtgcccggcccctgccccccgctgccggtgcctctaaaaagccc
ttcctcccagttgtccagacagaggccaagatgagcagccgtgccagtgagccagctccc
gcccgcaccagcacacacagacctccccaacccactgttttgcccccctcatctgccccc
agtcctggctctaccaggaccactcggcctctagccacagcgatgcctcccaccctcact
cctggtttagtccccactggaagcaagaaacccactggatcagaagccacaaagaaagcc
agacccaagaagcccgtcccactcagacccgggaaggcatccagggatgtccccatcagt
gatccgaccacggggcccacccccagccagccccggcccggccggcagaccaccccggcc
ccagcgttggcccaggcgcgattcctgtcctccagcccctggcccacgagcagtggctat
tcgttctttcatctggtgggacccacgcctttcccgctgctgatgggacctccggggccg
aagggagactgtggttttccgggcccccctgggctgcctgggctccctggaccccccggt
gcacggggacctcggggtcctcctgggcctcacggaaatccaggcctccccggccctcct
ggagccaaaggacagaaaggggacccggggctctcaccaggaaaggcccacgatgggaca
aagggcgacatgggcttgcccgggctccctggggatccaggaccgcttggacgaaaggga
tacaagggctaccctggacctgctgggcaccccggagaacaggggcggccgggacccgag
ggcagcccaggggccaaaggttaccctggcaggcaggggttacctggacctgtaggagac
cctggtcccaaaggcagccggggctacattggactcccagggctcttcggcctgccaggg
tccgatggagagcgtggcctgcctggtgttcctggcaagaggggcaagatgggtaggccg
gggtttcctggagactttggggaaagaggcccacccggactggatggaaaccccggcgag
ctgggcctgccagggcccccgggagtccccggcctcattggtgacgtgggaacgttgggt
ccgattggctacccaggacctaaaggcatgaaggggctgatgggaaacgtgggggagccc
ggactgaaaggtgataagggcgaacaaggggttccaggtgtgtcaggagatgccggattc
caaggagacaagggcagccagggattgccggggttcccaggtgcacgggggaagccaggg
cctctgggcaaggttggagataaaggatcccttgggtttcctgggccccctgggcctgag
ggattccccggagacatcggcccccctggggacaacggcccagaaggtgtgaaggggaag
cccggagctcgaggcctgccgggaccccctgggcagctggggcccgagggagatgaggga
cccatggggccacctggtgcccctggcttggagggtcaacctggcaggaaagggtttcct
gggaggcccggccctgatggcttgaagggggagccgggcaaccctggacggccggggccc
gtgggtgagcaggggctcctgggctttgtcggtctggtcggggagccaggaatcgtggga
gaaaagggtgaccggggcatgatgggacccccaggagcacctggacccaaggggtcaatg
ggtcatcctggaacgcccggtggtgttgggacccccggagagcccggacccccgggtcct
ccaggatctcgaggcccacctggcatgaggggagcgaagggacgccggggcccccgagga
ccagatggaccagctggggagcagggatcccggggtctgaagggccccccaggaccgcag
ggcagactgggccagcctgggcagcagggtgcagccggtgagcgagggcacctgggcgca
cgaggctttcctggcatccccggcccctcgggcccacctggtaccaagggcctcccagga
gaaccaggccctcagggaccccaaggaccacttggccctccaggagagatgggacccaag
gggccgccaggggcagtgggagaaccgggccttcctggggaagccgggatgaagggtgac
cttgggcctctgggcacccctggggagcaaggcctcattgggcagcggggagagccgggc
ctcgaaggtgacagtggtcctgcagggcccgacgggctgaagggggacaggggtgacgca
gggcctgacggtgagcgtggtgagaagggccaggagggactgatgggcgaggatggcccc
cctggcccgcctggcatcactggcgtccggggtcctgaaggaaaaccagggaagcaaggc
cagaagggccggaccggggccaagggtgccaagggctaccaaggacagctgggtgagatg
ggagcccctggagaccccggaccccctggcaccccaggccctaaagggtcccggggcagc
ctgggaccaacgggcgctccaggacggatgggggcccaaggtgaaccgggactggccggt
tacgatggacacaaaggcatcgcgggacccctcgggcctccgggaccaaagggcgaaaag
ggggagcagggcgaggacggcaaggccgaggggccccccgggccacctggagatccgggc
cctgtgggtgatcgaggagaccgcggggagccaggggaccccgggtaccctggacaggag
ggtgtccccggcctctgtggaaatgcgggccagcagggccttcccgggcatccgggaccc
cggggacgaccgggacccaaaggatcgaaaggggaagagggaccaaagggaaagcaaggc
aaggccgggccaccaggacggagggggatccagggcctgcaggggctgccggggccccgg
ggcgtggtggggagacagggccctgaaggtgtcgctgggccagatgggcttccaggcagg
gatggtcgaccgggacagcagggggagcaaggagctgatgggactcctggccccatgggt
cctgctgggaagagaggaaacccaggtgtggccggcttgcccggagcacagggaccccca
ggattcaagggtgaaagcggactacctgggcagctgggtccccccggaaagcgggggaca
gagggcggaacaggtcttcctgggaaccagggggagcctggatccaaaggccagccgggt
gactctggccagatgggcttcccaggaatggctggcctcttcggacccaagggcccccct
ggagacatcggcttcaaaggcatccaggggcctcgggggcctcctggcttgatgggaaaa
gaaggcatcatcgggccccttgggatcttgggaccttcaggacgcccgggtccgaagggc
gacaaaggcagccaagggaacatgggattgcaaggtccgaggggtcctcccggccccaga
gggcgaccaggcccaccgggtcctccagggagacctatccactttcaacaagatgacctt
ggggcagctttccagacgtggatggacactcatggagcactgagagcagaggtttccagc
catccggaccggctggtgctggaccagggaggggagatctttaaaaccttacactacctc
agccacctcatccagagcattaagacccccctgggcaccaaagagaaccccgcccgggtc
tgccgggacctcatggactgcgagcagaagatggcagatggcacctactgggtggatcca
aaccttggctgctcgtccgacaccattgaagtctcctgcaacttcacgcatggtggacag
acgtgtctcaagcccatcaccgcctccaaggtcgagtttgccgtcagccgggtccagatg
aattttctgcacctgctaagctctgaggtgacacagcatatcaccatccactgcctgaac
atgaccgtgtggcaggagggccccgggcaggccccagccaagcgggcagttcgcttccgg
gcctggaacgggcagatcttcgaagctgggggtcagttcaggcctgaagtgtccatggat
ggctgcaaggtccaggatggccgctggcagcagacgctcttcaccttccggacccaggac
ccccagcagttgcccattgtcagtgtggacaacctccctcctgcctcatcagggaagcag
taccgcctggaagttggacctgcgtgcttcctctga
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integrated database retrieval system
