Mizuhopecten yessoensis (Yesso scallop): 110445172
Help
Entry
110445172 CDS
T05079
Name
(RefSeq) collagen alpha-1(II) chain-like isoform X1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
110445172
NCBI-ProteinID:
XP_021345307
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MNCVTLGSFICLLYLTIIEVCWANNYRHFNYRLPSYLQVQPLRECTNTFTEYKSKWCWDP
QNHRWFTKLQPFTKKVCCPGWEGPKCDSKCFDCQQFHNLTERVTTLERRSTSTTTVITGN
GTKGERGEPGLPGRTGPQGRDGRAGQRGPKGADGIQGPPGPAGRSGRKGDPGVPGLSGAD
GLPGANGLIGRRGEVGPRGRDGQDGEPGPTGETGLPGVQGPRGPPGPPGLPGSGGGSSGI
PVKGEPGDVGPQGPAGQKGERGARGSPGRDGLNGGIGLTGERGLDGRTGRKGDAGERGPA
GEMGLPGASGLDGARGPIGAAGLQGEKGEAGPVGPAGPPGPFGPPGPPGNDGRPGFSGEP
GRDGVDGINGQDGSDGRDGQNGRDGTNVDMERIKELERTIQTLITNMTRCCNRVEVLEID
LIGIKKQIDELNKTIIVIPPQPVPPAPTTPRPGCSADQFTCADGTCIGAQFKCDEIPDCP
DSSDERNCPVTVRCPESQFLCDKKKCIPPSFLCDGNSDCEDGTDEGETANCGPRCNPDEF
RCNSGQCIPGAFKCDTYGDCDDASDESEAVCGTKPSPCSPSQFQCTNKKCISNSLMCNDN
DDCGDNSDEDSEMCGFEIGGTEGPGSGEQDDDESRPPRGDIP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgttactctaggaagttttatatgtctgctgtatctgactattatagaggtg
tgttgggccaataactacagacactttaactatcgcttgccgtcttatctacaggtgcaa
cctctaagggagtgtactaatactttcacagaatataaaagcaagtggtgctgggaccca
cagaatcatagatggtttaccaaacttcaacctttcaccaaaaaagtatgttgtccagga
tgggagggccctaaatgtgatagcaaatgttttgactgtcaacaatttcacaatttaact
gagagagtaacaaccttagaacggcgatcaacaagtacgacgacagttataacaggaaat
ggtactaagggagagcgcggagagccgggattaccaggcagaaccggacctcaggggcga
gatggtcgtgccgggcaacgtggaccaaaaggggccgacgggatacagggaccaccagga
cctgctggacgttcaggaaggaaaggtgacccaggcgttccaggtttaagtggagctgac
ggtctccctggggccaatggtttaataggacggagaggcgaggtcggtccaagaggacgg
gacggccaagacggggagcccggtcctactggagaaacgggactccccggagtacaagga
ccacggggacccccgggacccccgggacttcccggatctggcggtggaagtagtggaatt
cccgtaaaaggagaacccggtgatgttggtccccagggtccagctggacagaagggagag
aggggagccaggggtagtcctgggcgggacgggcttaatggcggaataggactgacgggg
gagagaggacttgatggtcgcaccggccgaaagggagatgcaggtgaaagaggacctgca
ggtgaaatgggtttacccggggcctcgggattagatggggctaggggacccattggtgca
gcagggttacaaggagaaaaaggagaagcgggacccgttggacccgccggacctccagga
ccattcggacctccaggaccccccggaaatgatggaagacccggcttttctggagaacca
ggacgggacggcgttgatgggataaatggccaagatggatcggatggaagagacgggcag
aacggaagggatggaacaaacgtagatatggagaggataaaagaacttgaaagaaccata
cagacgcttataacgaatatgactcgctgttgtaaccgagtggaagttttagaaatcgac
cttataggaataaagaaacagatagacgagcttaataaaacaataatagttataccacct
caacctgtccccccagcacccaccacacctcgcccaggttgttcagcggaccagttcacg
tgtgcagatggaacatgtattggtgcccagttcaagtgtgatgaaatccccgattgtccg
gatagttctgacgagcgaaactgcccagtaacagtgagatgtccagaaagccaattcctg
tgtgataagaagaaatgcataccgccatcgtttctatgtgacggaaacagcgattgtgag
gacggaactgacgaaggagaaacagctaactgtggtcccagatgtaacccggacgagttc
cgctgtaacagtggtcagtgcattcctggtgccttcaagtgtgatacctacggagactgt
gacgatgcatcagacgaatccgaagccgtatgtggtacgaaaccctcaccatgttcacca
tcacaattccaatgtacaaacaagaaatgcatcagcaattcactgatgtgcaatgacaac
gacgattgtggtgataattcggacgaggactcggaaatgtgtggttttgaaattggagga
acggaaggcccagggagtggtgaacaggatgatgacgaaagtagaccaccacgaggagat
atcccataa
DBGET
integrated database retrieval system
