Mizuhopecten yessoensis (Yesso scallop): 110446837
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Entry
110446837 CDS
T05079
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03020
RNA polymerase
myi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110446837
09124 Replication and repair
03420 Nucleotide excision repair
110446837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110446837
03019 Messenger RNA biogenesis [BR:
myi03019
]
110446837
03400 DNA repair and recombination proteins [BR:
myi03400
]
110446837
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110446837
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110446837
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110446837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
110446837
NCBI-ProteinID:
XP_021347835
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MFYHVSLEHEILLHPRYFGPNLLNIVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDVVIQQDDEIRIKIVGTRVDAKDIFAIGTLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacgtgtctttagagcatgaaattctgctccatccaaggtactttggaccc
aatctgcttaatatagtcaaacagaagctgttcactgaagtagagggaacttgtacagga
aagtatgggtttgttatagcagtaacaacaattgacaacattggtgccggtgtgatccag
ccaagtcgtggctttgttgtatatcctgtcaaatacaaagctatcgtgttcagacctttc
aaaggcgaggtgttggatgctgtagtcactcaggtcaataaggtcggtttgtttacagag
attggaccgttgtcctgtttcatctctcgacattctattccagcagacatggaatttgat
cccaattccaacccaccttgttataagaccaaagacgaggatgtagttatacagcaggac
gacgagatcagaattaagattgtcggtacacgagtggatgctaaagacatttttgcaatt
gggacattgatggatgattatttgggtttggtgagctag
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