KEGG   Mizuhopecten yessoensis (Yesso scallop): 110446837
Entry
110446837         CDS       T05079                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03020  RNA polymerase
myi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110446837
  09124 Replication and repair
   03420 Nucleotide excision repair
    110446837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myi03021]
    110446837
   03019 Messenger RNA biogenesis [BR:myi03019]
    110446837
   03400 DNA repair and recombination proteins [BR:myi03400]
    110446837
Transcription machinery [BR:myi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110446837
Messenger RNA biogenesis [BR:myi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110446837
DNA repair and recombination proteins [BR:myi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110446837
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 110446837
NCBI-ProteinID: XP_021347835
LinkDB
Position
Unknown
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDVVIQQDDEIRIKIVGTRVDAKDIFAIGTLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctatcacgtgtctttagagcatgaaattctgctccatccaaggtactttggaccc
aatctgcttaatatagtcaaacagaagctgttcactgaagtagagggaacttgtacagga
aagtatgggtttgttatagcagtaacaacaattgacaacattggtgccggtgtgatccag
ccaagtcgtggctttgttgtatatcctgtcaaatacaaagctatcgtgttcagacctttc
aaaggcgaggtgttggatgctgtagtcactcaggtcaataaggtcggtttgtttacagag
attggaccgttgtcctgtttcatctctcgacattctattccagcagacatggaatttgat
cccaattccaacccaccttgttataagaccaaagacgaggatgtagttatacagcaggac
gacgagatcagaattaagattgtcggtacacgagtggatgctaaagacatttttgcaatt
gggacattgatggatgattatttgggtttggtgagctag

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