Mizuhopecten yessoensis (Yesso scallop): 110447540
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Entry
110447540 CDS
T05079
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04512
ECM-receptor interaction
myi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110447540
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110447540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myi04147
]
110447540
00536 Glycosaminoglycan binding proteins [BR:
myi00536
]
110447540
Exosome [BR:
myi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110447540
Glycosaminoglycan binding proteins [BR:
myi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110447540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pentapeptide_2
Motif
Other DBs
NCBI-GeneID:
110447540
NCBI-ProteinID:
XP_021348986
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MMKSLYTLLPITILLFLQKAHGQGEFFGNIRPVSRFNGFFGQRFRAASNIPQNGQQQQQP
TTQPQQQQQQQQQQQQQQQPQSTNNAATSTTGASTASNNPQLPSNTQAIPRQVGTVTVPI
IGPFPSDSVQQTPTEMFGMGQQGPFNRMGQPMLPSQDMSPFGAPGGFNPMLARRQQQMQQ
MQQMQQMQMQQMQQQRQQQQQQSMLPFDQQQRMSSFPSQFGSSPQRGNQQVTIPEQTQNI
NFPRTLPPEVRREMQRAGIGRMTGVSPRFGEIKPLPEITEVIEANRPGQTTNAGTQPARP
TPQQLPPQQQQQPQRPQQPQQPQQQLPMQGSSTTFNAPGRQVTTSQQATRTQSPPMPSQV
PGSFGQGRMPPQMIPPMFRGNMQGPMAGPMRGPMGGPMGGPMGGPMGGPMGGPMGGPMGG
PMGMPTGGPMGSQMGRPMFPDATQAIPDSTGQQQPQPQQPQQQPQPQQPQQQPQPQQQQN
GQQTPPASTQWSQNQPQQLPTQPQTMQGMQQMGMPNMGGMFPMGMSNMPMMRMPNMGMPN
MGIPNMGMPNMGMQNMGMPQNGQTGIPQMRPQPGQQPSANRQRFGGFSAMSGLGNQGGNM
PTNSAPQPSGQPSGQSTNQITNPSMPQNSMPNGINSGISGRFPMPNMFQNNMVGRPGRMQ
GGMQGMQGGMQGRMQGMQGGMEGMQGGMQGMQGGMQGMQGGLQGMQGGMQGMPRILPGMS
GGMPGMSGGMSGMPNGISGRFQGMPRRMPGMQTGPPQQGAGSVQQPDPSIPSLPANMPVP
DLPGSNQSPLPTSLPSQSTPAPTASIPSLGDQSRPIPSFQGIQPLPGAFPGAFPGAFHLP
PVALPPITAVDPPAMPGPMEVPGPIELSGPMDLPGSFELPSPLDLSAPLELSGFPAPSSQ
GLPNPFSLPAGKPENKSTLPGADLSPEKVPPFPGLNLPGSSPSGPRGSAGIPISMRGRAG
FPIDATGPLPPPQDVNAGEPVSNITPPPPSSSDFSANALPGPDAMLGIGGAPPGFSPLDL
SGFPGLDTSAPFPSLDSTASFPSSDSLPIGGSVASPSSSSISNTDIFNASPVDPFPFNTA
GTVFSDTGSIGIIPTDTGSVPSEPIPDPAIATQVPVPQDVFQPGPTDVLQNPTEGIPIQD
APIPQLPPQVATDNNKVAETQDPFPGLNFPSGPSLLGNPSSKTDIVNPPDAMIPLTEIPR
PSDAIIQGLPVFSR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatccctttatacactgctgcctatcacgatattactctttctacaaaaagca
catggccagggggagtttttcggaaacatcagacccgtaagtagatttaatggctttttt
ggacagagatttcgtgcagcatcaaatatcccacaaaatggacaacagcaacaacaaccc
acaactcaaccacaacaacaacaacaacaacaacaacaacaacagcaacaacaacaacca
cagtctacaaataatgcagcaacatcaacgaccggggcttcgacagcgtctaacaatccc
cagttaccatcaaatacccaggctatccccagacaagttgggacagtaacggtccccatc
ataggtccctttccatccgacagtgtgcagcagacaccaacagaaatgtttggcatggga
cagcaaggtcctttcaatcgcatgggacaacccatgttaccttcccaggatatgtcccct
ttcggagcgcctggtggcttcaatccaatgctcgcaagacgacaacagcagatgcagcag
atgcaacagatgcagcagatgcagatgcagcagatgcagcaacaaagacagcagcagcag
caacaatccatgttgccgttcgaccaacaacaacgcatgtcctcatttccatctcagttt
gggtcgtcccctcaaagaggaaatcagcaggtcacaattcccgagcaaacacaaaatatc
aactttcctcggacacttcctccagaggttaggagggagatgcagagggctggaattggg
agaatgacaggtgtgtctccgagatttggtgaaatcaaacccctacccgagattacagag
gttattgaagctaaccggcctggacagacaaccaatgccggaacacaaccagcgagaccc
acccctcaacaactaccaccccaacaacaacaacaacctcaacgaccacagcagcctcag
cagcctcagcagcagcttccaatgcaaggctcatcaaccacatttaatgcaccaggccgg
caggttacaacatcccagcaagccacacgcacccagagcccgccaatgccatcccaggtg
ccaggatcattcggacaaggaagaatgccaccacagatgatccctcctatgtttagaggc
aatatgcaaggtccaatggcagggccaatgagagggcctatgggagggcctatgggaggg
cctatgggaggacctatgggagggcctatgggaggacctatgggagggcctatgggagga
cctatgggaatgccaacaggaggtccaatgggaagtcaaatgggaagaccaatgtttcca
gatgcaactcaggccataccagattcaacagggcagcagcaacctcagccgcagcagccg
cagcagcaaccccagccgcagcagccgcagcagcaaccccagccgcagcaacaacaaaat
ggccagcaaactcctccagctagtacacaatggtctcaaaatcagccacagcagcttcca
acccaaccacaaacaatgcagggaatgcaacaaatgggaatgccaaatatgggcggtatg
tttccgatgggcatgtcaaatatgccaatgatgagaatgccaaatatgggaatgccgaat
atgggtataccaaatatgggaatgcctaacatgggtatgcaaaatatgggcatgccacaa
aatggacaaaccggtattccccagatgagaccacagccaggtcagcaaccatcagcaaac
agacaacgttttggaggattctctgccatgtcaggtctaggaaatcaaggcggcaacatg
ccaacaaacagcgcaccacaaccatcaggtcaaccaagtggccaatcgacaaatcaaatt
acaaaccctagcatgccacaaaacagtatgccaaatggaattaattctggtatatctgga
agatttcctatgcctaatatgttccaaaataacatggtcggaaggccgggaagaatgcaa
ggaggaatgcagggaatgcaaggaggaatgcaaggaagaatgcagggaatgcaaggagga
atggagggaatgcaaggaggaatgcagggaatgcaaggaggaatgcagggaatgcaagga
ggattgcagggaatgcaaggaggaatgcagggaatgccacgcattttgccgggtatgtcg
ggaggtatgcctggaatgtcaggaggtatgtcgggtatgccaaatggtatttcaggacgt
tttcagggtatgccaagaaggatgccaggaatgcagacaggaccaccacaacaaggagct
ggatccgtccaacagccagatccaagtattccatctttaccagccaatatgccagtccca
gatttacctggcagcaatcaatctcctttacctacatctctaccatcacaaagtactcct
gcaccaacggcttctataccttctctcggtgaccagtccagaccaataccatcctttcaa
gggatacagccgttacccggagcgttccccggagcgttccccggagcgttccacctgcca
cccgtagcgttaccaccaattacagctgttgatccacctgccatgcctggacccatggag
gtgcctggacccattgagctgtctggacccatggatttgccaggatccttcgaattgcca
agtcctcttgacctttcagctccccttgaactttcgggatttcccgcaccttcaagtcaa
ggtctaccaaacccgttttctttgcccgctggaaaaccagaaaataaatccaccttaccg
ggcgcagatctatcaccagagaaagttccgccattcccaggtttgaacctccccggatct
tcaccttctggtcctagaggaagtgctggaatccctatttccatgcgtggacgagctggt
ttcccaattgacgccactgggcctctcccacctccacaagatgttaatgctggcgagcca
gtgtcaaacataacaccaccacctccttcctcttctgacttctctgcaaacgcgctacct
ggacctgatgcgatgcttggcattggaggagcccctcctggattttcacctttggacctt
agtggttttcctggtctagacacttccgcaccatttccaagtttagattctactgcatca
tttccaagttcagactctttgcctattggcggtagcgtggcaagtccgtcatcttcatct
atttcaaacacagatatttttaatgcatcaccagtggatccgttcccttttaataccgcc
ggaactgtgttcagcgatacaggcagtataggaattataccaactgatacaggtagtgtt
ccatctgagcctatccccgaccccgccatagccacacaagttcctgtcccccaagacgtt
ttccaaccaggtcccactgatgtgcttcagaatcctacggagggaatccctatccaagac
gcgccgatcccacagcttcccccacaggttgctactgacaacaacaaagttgccgagaca
caggacccttttccgggactaaatttcccgtccggtccaagtcttctcggaaatccctcc
tccaagacagatattgttaatcctccagatgctatgataccgctgacagagatccctcgt
ccatctgatgccatcattcaaggtctaccagttttcagcagatga
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