Mizuhopecten yessoensis (Yesso scallop): 110449861
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Entry
110449861 CDS
T05079
Name
(RefSeq) nuclear pore complex protein Nup214-like isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110449861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110449861
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110449861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
eIF2A
ANAPC4_WD40
WD40
TolA_bind_tri
HSR
Motif
Other DBs
NCBI-GeneID:
110449861
NCBI-ProteinID:
XP_021352670
LinkDB
All DBs
Position
Unknown
AA seq
2147 aa
AA seq
DB search
MSEEDGVPPERDVKDFKFQQLCRFRISDSPSDLPKHKSRLLASSSRYGLVFVGYDTGFKV
IKPAELSKIDQANARDRMTVIIDNFPLVADITIQGFVSFISLNADELSLAVVVTRDDLVQ
AYLYDVRAFADKTTPVQCFMTVRLTNGGATRFEDLAWNPVQPSTLVTVQTDGGISLYDIS
DKLTIVATIKASSANCVCWSPRGKQLVVGTTDGKLVQYDQELKKKREWVCPDILTRGNYK
VVGVIWLSTFEFLTAYIPDSAEPSDQPDIVLIRGSKDGPIRYQNFEDPCFGNGEERERRL
LFQVLSKWDMLLACSSNACEISVIGKHQSEKGDWERWNLDDSARAELPLTDNHFDTFPMG
VAIDYSSQHPILLGEGSHPPSPILLLLSTDGVLVPYYMMNTYSGAAILTEPPKPLTTAGM
RQPRGELETDAARAPISSNTGSGATTGLASTGTGLSTGVATGLTTGPSFQFVNPNATATT
KAAVSSFGIPKTTAPSLFGSGPPASFGPGTSFGGLTTTKATPASTNTTSTVASAAPFSFS
QGTPTSTSKAATFSFSESLSKNDASSGFNFGGSSTPSGGSSAFSFKTSSSSGATSVFGVP
STTSDNKSNGIFGAAPSTAGTTPTAPAPTSTFGFSVNSTKPTVSFTTSSVSSPSASKTSG
SSFANVAPGTQGPVIPPGVQLSGGTRPERPEQTRPPAAQAFPGIGQTQHAQPQQQHAFKG
FVTSAQSSTPTVTPQSALGFKGFINPQMSQPTTPTPMPNLTGQAAGVGQPASSQFKGKAP
AVSVSKAPVPTASVPFTPPSGNRLPTAPVQPIGRVQESRLAPVQAVETPRSGDSEDTFTK
GIMEELAHFEEEMSEFRAQTCNGGVLVGSRSEMHQLRGKVEELTNFSSEIITTTKDQTKE
VDEQKSLCLDLFAMVEECRLRESRNTDNKYMHLLKARALDPASLDHLRQLQQQYQVLDQG
LRDVDAILDQQWKEHQNRDRNRNKIKAPTTDVMYRVLKSNSSLIRNQKSNLNNLEKKLKE
LKLYNKTSAWQHSNSSNNESRDLELSTLADSLLDVDDTPKPSLSSTQISNKAPSPEKQAR
LRDHLARRAVPRIKSTRPENLSMSRIAAVDRRRYDPEETVVAHAPEQNFQKHIAERGSKH
YGTSFRQPTGNKMSSGGMNTAGNVGGQMFMPSGQMSALSTIQGKLPMTITGQSGTRDVSR
HNMPPLSGNNNLPSKYTFSAPSAVPGGLKNLGHIVVEDITPPSSTGYEEEDEEDDEEDEE
DDTYDDDDDDDYEEEEDENGIGFGSQYTMTEQANENILVKGHSTSLPKAVGFNIAQTSGN
VNKNLFGSAVTNKSVSGTVATTVSPMVATFGGKPGEFSFSSGTQSQTSFTFGGNAGGSAF
AFGGTSKPETGVKTPGVASASTTKSDQSAFSVSATKRPAVAKDTGFNFGGQMAKNTDRPS
EEVSTISPLLLEALSEEEVPRVPTSGTAAAGFSFTNPVPQSKPDVSAAGTLKQELGSSQE
PKKVFGQSTSIGGSLFRVQTSVALKAGGSSAASTANTAAILSTPASTVSSSFPGFSVSSS
TPVFGQTSSAVPSVTTTATGNGLFVKPAVTAPTTLIPGGSIVSGNSASAGVSQISSSTST
PTTSATTGLFGKTEAGVEVTSPEPDTQSPGDVSGQSETSVSAFGQPTQATTGLFGKPTTT
STGGLFGTATSTSTGGLFGTATTSTASTGGLFGTATSTTSTGGLFGTAATSSTNAGSLFG
TAPSTTSTDTIFGTTASTTKPGGMFETPSSTTSTGSIFGVTTANSATPAFGASSSATSTT
TSLFGGTSASTSASSIFGSAPAVSQSAPIFGSTSASKPLFGSTPTSTTSAPSMFGGTPIS
TASTGFGGFTSPSFGTSATFPQSNQSSTLFGQAATTQAGFGQSPSQSPFSQTQSSSQNQA
SGDGGLFSGLGGQPSAEKANTNVFGSPSSFGSSDQPGTASLFGNQTSTGFGTTGSGPNSP
SGGAFSGGFAMGGTGVGSSGFGVNQSQGQGFGAAPSFGGSATFGSTLGGFGSPPGFGSGA
AFGSAASFSSPVTSASTSPGGTGFAGFASSNSPTFGSLAGSSDTPTFGSMEGGGGGGVGV
GGGGFSTTPGFGGGTSAGFGSTSSQGFGNAGTGNNSFGSNPAFSGYR
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaggacggcgtacctccagaaagagatgtaaaggattttaaattccagcag
ttatgcagatttagaataagtgacagtccatcagatctaccaaaacacaagtcaagattg
ctggcatcatcatcacgatatgggctcgtctttgttgggtatgacacaggttttaaggtc
attaagcctgcagaactcagtaagattgaccaagccaatgctagagaccggatgacagtt
attattgacaatttcccgttggttgctgatataacaattcaaggatttgtgtcattcatt
tccctcaatgctgacgaattgagcttggctgtggtagttaccagagatgatcttgtgcag
gcctatttatatgatgtcagagcttttgctgacaagacgacacctgtccagtgctttatg
acggttcggctgaccaatggtggggctaccagatttgaggatcttgcttggaatcctgtc
cagccaagcactcttgtaactgtacagactgatggtggtattagtctgtacgatatttct
gacaaactcactatcgtggcaaccataaaagcatcatcggccaactgtgtgtgttggagt
ccacggggaaagcagctagttgttggtacgacagacggaaaactggtacaatatgatcag
gagctgaagaagaaacgggaatgggtatgtcccgatatactgactaggggcaactacaaa
gttgttggtgttatttggctgtccacatttgagtttctgacagcctatatccctgacagt
gctgagccaagtgaccagcctgacattgtccttatcagaggatctaaagacgggcccatc
cgctaccagaattttgaggacccttgctttggaaatggggaagagcgagagaggaggctt
ttgtttcaagttctatcaaaatgggacatgctacttgcctgttcaagtaatgcttgtgaa
atatctgttattgggaaacaccagagtgaaaaaggtgactgggaacgttggaaccttgat
gattcagctcgggccgagcttcctttgacagacaaccattttgacactttcccaatgggt
gttgcgattgactactcctctcagcatcctatactactaggtgagggaagtcaccctccg
tcccccatccttctcctactgtccacagacggggtactagtaccatactacatgatgaac
acctacagtggggcagccatccttacagagcctcccaaaccactcaccacggccgggatg
agacaacccagaggagagttagagactgatgctgctagagctcctatcagttctaatact
ggcagtggagctaccactggactggccagtactggcactgggctatctacaggagtagcc
acagggctaactacagggccaagcttccagtttgtgaacccaaatgcgacagctaccact
aaggctgctgtttcatcctttggaattcccaaaaccacagccccatcactttttggcagt
ggccccccagcctcatttggacctggtacgtcttttggaggattaaccacaacaaaagct
actccggcaagcacaaatacaacatccacagtggcttctgcagctccattcagtttttca
caaggcaccccaacatcaacatctaaggctgctaccttcagcttcagtgagtccctgtcc
aagaacgatgcgtcttcagggttcaactttgggggtagctctaccccaagtggagggtct
tcagctttcagttttaagacatcatcttccagtggcgccacatcagtgtttggtgtacct
agtacaactagtgataacaaatcaaacggcatatttggagcagcaccaagcactgctggt
actacccccactgctcctgccccgacatccacttttggatttagtgttaattcaacaaaa
ccgacagtcagttttactacatcaagcgtgtcatcaccctcagcttccaagactagtggg
tcaagctttgccaatgttgcacccggtactcaaggtcctgtgatccccccaggtgtacag
ttgtcaggaggaacacgccctgagagaccagaacagactcgtccacctgcagcacaagca
ttccccgggataggacagactcagcatgcacaaccccaacagcaacatgcatttaaaggc
tttgtaacatcggctcagagctcaacaccaactgtaacacctcagtcagccttagggttt
aaagggttcatcaaccctcaaatgtcacagcccaccaccccaacacctatgccaaacctg
actggacaggcagcaggtgtgggccagcctgcatcatctcagtttaaaggtaaggctcca
gctgtttctgtttctaaggcacctgttccgacagcttcagtaccattcacacctccttcc
ggtaatcgtctaccaactgcccctgtccagccaattggaagagttcaagagagcagacta
gcccctgtacaagcagttgagacccccagatcaggtgattcagaagacactttcacaaag
ggcatcatggaggagttggctcactttgaggaggagatgtcagagtttcgggcccaaacc
tgtaatggcggagtcctggtgggcagtcgatcggagatgcaccagcttagaggaaaggtg
gaagagttaaccaacttttcatcagagatcataacaacaacgaaggaccagactaaggag
gttgatgagcagaagtcactgtgtctggatttatttgccatggtggaggagtgccgttta
cgagagagtcggaatactgacaacaagtacatgcatctattaaaagcacgggccttggac
cctgccagtctggaccacctccggcagctacagcagcagtaccaggtgcttgaccagggc
ctcagagacgtggacgccatcttagatcaacagtggaaagaacatcagaatagggacaga
aacagaaacaagatcaaggcgccgacaacagatgtgatgtatcgcgtcctgaagagtaac
agctctctgatacgcaaccaaaagtctaacctcaacaacttggaaaagaaattgaaggag
cttaaactctacaataaaacttcagcatggcaacactccaattcttcaaataatgaatca
agagatttagagttgtctaccctggcagatagtctgttggatgtggatgatactccaaag
cctagcctctcctccacacagatcagcaataaagctccaagtccggagaaacaagcacgc
cttcgtgaccacctagctagacgtgcagtacccagaattaagtccaccaggccagagaat
ttgtcaatgtcccgtatagctgctgtagaccgacggaggtatgacccagaagagactgtt
gtggctcatgcaccggagcaaaacttccaaaaacatatagctgagagagggtccaaacat
tatggcacttcgttcagacaaccaaccggaaataaaatgtcttctggtggcatgaataca
gcgggaaacgttggtggtcagatgtttatgccaagtggtcagatgtcagccctgtccacc
atacaaggcaaacttcccatgactataactggacagtctggaacaagggatgtgagcagg
cataatatgccccctttgagtggtaacaacaaccttccatccaagtacacattcagtgct
ccttcagctgtcccagggggactgaagaacctaggccacatagttgtggaagacataaca
ccaccctcatccacaggatatgaagaagaagatgaggaagacgatgaagaggatgaagag
gatgacacatatgatgatgacgatgatgatgattatgaggaagaggaagatgagaatggt
attggatttggatcccaatataccatgacagaacaagccaatgagaacattcttgttaaa
ggccatagcacttcactgcctaaggctgttggatttaatattgctcagacatctggaaat
gtaaacaaaaacttgtttggatctgctgtcaccaataaatctgtgtcaggtactgtagct
actacagtgagtccaatggtggcaacatttggtggaaaaccaggagaattcagcttcagc
agtggaacacagtcccagacctccttcacctttggtggcaatgctggtgggtctgcattt
gcatttggtggaacctctaaaccagaaactggagttaaaacaccaggtgtagcatcagcc
agtaccaccaagtctgaccaatcagctttctccgtgtctgccacaaaacgtccagcagta
gctaaggacacgggtttcaacttcggagggcaaatggctaaaaacacagacaggccaagt
gaggaagtatcaactatcagtcccctgttattggaagccctgtctgaggaggaagttccc
agagtaccaacgagtggtacagcagctgcagggttttcattcactaatcctgtaccacaa
tcaaaacctgatgtctcggccgcaggaactctcaaacaagaattaggaagcagccaagag
cccaagaaagtatttggacaatcaacatcaattggaggcagtttgttcagagtccaaacc
tctgttgccttgaaagctggtggcagcagtgctgcatccacagccaatacagcagccatt
ctgtctacacctgcctccaccgtgtcatcttctttcccaggttttagtgtgagttcctct
actcctgtgtttggacaaacaagctcagctgtgcccagcgtaactaccacagctacaggt
aatggcttgtttgtaaaaccagcagtaacagcacctacaacgcttataccaggaggtagc
attgtgtcgggaaattctgcatcagcgggtgtatctcagatttcttcctcaacttccact
cctactacaagtgcaaccactggactgtttggaaaaacagaagctggggtagaggtaacc
agtccagagcctgatactcaatcaccaggagatgtgtctggtcagtcagaaacatcagtt
agtgcttttggtcagccaactcaagcgaccactgggctgtttggtaaaccaaccacaacc
agtacagggggcttgtttggaacggctacctcaaccagtacagggggcttgtttggaaca
gctaccacctccaccgccagtacagggggtttgtttggaacagccacctccaccaccagt
acagggggcttgttcggaacagctgccacctccagcaccaatgcaggaagtttgtttgga
acagctccttccaccaccagtactgacaccatatttggaacaactgcctccactacaaaa
cctggaggcatgtttgaaacacccagttcaactacaagtacagggagcatatttggggtg
accactgcaaactcagctacacctgcatttggtgcttcatcctctgctacttctactaca
acctctttgtttggggggacatctgcatcgacatcagcttcgtcaatatttggatctgca
cctgcagtgtctcaatcagcccccatatttggaagcacttcagcttctaagcctttattt
ggtagcacacctacttcaacaacatcagccccttccatgtttgggggtacacccataagt
acagcctccactggatttggaggattcaccagtcctagctttggtacgagtgcgacgttt
ccacagtcgaatcaaagcagtaccttgtttggtcaagcagctacaactcaagcaggattt
ggccaatcaccaagtcagtctcccttcagccaaacacagtccagctctcaaaaccaggca
tctggagatggcggcttgttcagtggactcggagggcaaccaagtgcagaaaaggccaac
accaatgtatttggttctccctccagttttggatcatctgaccaacctggtacagcgtca
ctatttggcaaccagacgagtacaggatttggtacaactggatcaggaccaaactcgcct
tctggtggggccttctcggggggatttgccatgggaggtacaggggtaggatcttccggc
ttcggggtcaaccagtcacaggggcaaggttttggggcggcaccatcatttggaggcagc
gctacatttgggagcacactcggagggtttggtagtccaccaggctttgggagtggagca
gcttttggaagtgcagcctccttttctagtcctgtgaccagtgctagtaccagcccggga
ggtacaggatttgcaggatttgccagttccaacagcccaacatttgggagccttgcaggc
tcgtcagatacaccaacctttggctccatggagggaggtggaggaggaggagtaggagta
gggggaggaggattcagtactacaccaggatttggaggagggactagtgctggattcgga
tctacatcttctcaaggatttggaaatgctggaaccggaaataattcatttgggtccaat
ccagctttttcgggatatagataa
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integrated database retrieval system
