Mizuhopecten yessoensis (Yesso scallop): 110452078
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Entry
110452078 CDS
T05079
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110452078
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110452078
Complex C
U4/U6.U5 tri-SnRNP related factors
110452078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
Motif
Other DBs
NCBI-GeneID:
110452078
NCBI-ProteinID:
XP_021356035
LinkDB
All DBs
Position
Unknown
AA seq
1977 aa
AA seq
DB search
MPSKRSSKSITPSSGKGNNSSSDSDSRDSGSSSSSGSSSSNSSHSDSDSDSRSRSPRRVK
SKSRSPRVKENVSKHEKEKSFVKTSSGSPRDTTGKKRTSRSKSGSPKIRTLGKRTSRSKS
GSPQNSRESRSNSRSSVIKEKGTPGKRESSRSKSRSKSKSRSRSKSGSKSKSRSRSKSKS
RSRSKSGSRSGSRSRSKSKSRSGSRSRLKSGSKSKSRSGSRSRSKSGSKSGSKSGSPQKK
DEVTQQEINRPSSRSKSASPEVEDKVELSLDRVTSISPLREKDDDEQSKSMSHSREKSKS
RSNSPDASKAKSKSPVRRSGSVTPPHHDMSNFHSEPESGEITDSDEEVPAVLRSAVGISR
RRGREDGEYNSDSSQDRKRRRGGRRSSSEEDRRFRRDDRRRDDYRERYRDDRRRDDRRGV
DDRRGRDRNDRYRDDERNDVRRRNDDRRRDDDRRRNDDRRRDDDKRRDGSRDTDKMSTSD
KKGSEEGKPDDKKDGEKAAKPAANKASALTTRTGGAYIPPARLRMMQAGITDKTSVEFQR
IAWEALKKSINGLVNKVNVSNLVDIVKELFQENIVRGRGLLCRSVIQAQAASPTFTHVYA
GLVSVINTKFPQIGELMMRRLVIQFRRGFKRNDKALCLSTTRFLAHLVNQQVAHEVIALE
ILTLLLENPTDDSVEVSIGFLKESGQKLTEVSPRGINAIFERLRNILHEGMIEKRVQYMI
EVMFAVRKDGFKCLILRSERKNSHILDEDSSDEDGSGSGSGSDSESEDDEEKEAANQVII
DKTETNLVALRRTIYLTIQSSLDFEECAHKLLKMELKPGQEVELCNMVLDCCGQQRTYEK
FFGLLAQRFCMINKKFIGPFQDMFKEQYETTHRLETNKLRNVAKFFSHLLHTDAISWGVL
SCVRLNEEDTTSASRIFIKTLFQELSEYMGLPKLNNRLRDPTLVQFFEGMMPRDNPRNTR
FAINFFTTIGLGGLTDDLREHLKNKSKQLMQQKAAEADEESSSSSSSSSSSSSSSSSSDS
SSSSSSESSSDDDKPTKRKKSTKDSKGRQQKEKQARKEKSLINAKQRKQRNDSSSEEEEE
KIRKENRKEKKAKDTPRSVKDKKEVNRNINRGKRDDSEEVIIERQNNRGRDYREHADEGN
KTGRRDKKGRKDDSGSEDDRRVRRGGSNQRNDRQAGNDRGNEGRNDHGKEGRNDRGKGRE
DSDSEEEEVMDRSRSNRKDRSRTSDPGQISDRQQSNDRQSRKDRHNRNDRQQSNDRESRN
DRLQSNDRRKRNDQQENNERHNRNDRQEKYERQNRNDRQESFERQSKNNRQQSYDRQSRN
DRQEIYERQGKNNRQQSNERQSRNDRQQSNERQSRNDRQQSYDRQSRNDRQQSNERQSRN
DRQRRQRADSDSDEEEMNTSKIGRNDERQQRNKKRSRQNESNDEEVTDRKKSRGKESQRD
TENDKRQQRNEKRRREQSSNSEEEVIERRKSSGKANQRYSEKDVRSQRNDGKQQRRQQAG
SDSEEEMEDRRKSKGNLRKNENDSRQRNERQPARRGVGSESEEEIVDRRNSRGQDNSRIN
NDRRPQMDKRQRKEETSDSEEEVADRRKSQGKVKSVVNDKREPQKHRAAVRKEASSSSSS
SSSGSGSSSSSGSSSSSSDSDSDSAEEVVVEPKNKDKIKSKPKSTNDTYFDPWERQKKGK
DEKQESSAKGAKSTKHNRSTEKVGKKARMDSSSEESSEEERVVERYSKSDKSREQSRRID
RIAQESESEEDDHQDKYTENVQKKERQSHNGGEVQRSRTREQTREKPEKKQQQQVESSEE
EVQHFDRGDRAQKRDKKSFVRDEEESSYTSREKYRKKEAYSDSEEEEVNYGRKGKSSTKS
RDTSRDESMDKSYEKSRKKDQRESREEYEESPRRLNSKLTKSSPVVKNKSEIQERLSKIA
SGEDMQDYNRSERAIDKYNTRSPDRSNNRDRYKSRSRSPVRREREVDSHRGYGGRRR
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaaagaagtagcaagagtataacgccaagcagtggtaagggaaataactct
tccagtgatagtgacagcagagacagtggtagctcatctagtagtggctcatcaagcagt
aacagtagtcatagtgacagtgattcagacagccgctcaaggtcacctcgaagggtcaaa
tccaaatcaaggtctcctcgtgtaaaggaaaatgtttctaaacatgaaaaggaaaaatct
tttgttaaaacaagttctggatcacctagagatacgacaggaaagaaaaggacctcaagg
tcaaaatctgggtcgccaaaaatcagaacattaggaaagaggacttcaaggtcaaaatct
ggatcaccgcagaacagtagggaatctaggtcaaattctagatcttctgttatcaaagaa
aaaggcacaccaggtaaaagggaatcttctagatctaaatcaaggtccaagtctaaatca
agatctcgatcaaagtctggatctaagtctaaatcaaggtctagatcaaagtctaaatca
aggtctagatcaaagtctggatcaaggtctggatctaggtctagatcaaagtctaaatca
aggtctggatctaggtctagattaaagtctggatctaagtctaaatcaaggtctggatct
aggtctagatcaaagtctggatctaagtctggatcaaagtctggatcgccacagaagaaa
gatgaagtcacacaacaggaaataaaccgaccatccagcagatcaaaatcagcatcacca
gaagtggaagataaagtagaattatctctcgacagagtgacatctatctccccacttcgt
gaaaaagatgatgatgaacagtcgaaatcaatgtcgcattccagagagaaatctaaatct
aggtctaattcaccagatgctagtaaggccaagtccaaatctccagtacgccggtccggg
tctgtcactcctcctcatcatgacatgagtaacttccacagtgagccagagagtggtgag
atcacagacagtgatgaggaagttcctgctgttctcagatctgctgtcgggatttcaaga
agaagagggagagaggatggagagtacaatagtgacagtagtcaagaccgaaagaggaga
cgaggtggtcgtcgcagcagcagtgaggaggaccgcaggttccgccgagacgatagacgc
cgagacgactacagggagcgttacagagatgacagacgaagagatgatcgcagaggggtt
gatgacagacgaggacgtgatcgtaatgatcggtacagggatgatgaacgcaatgatgta
cgcaggcgaaacgatgatagaagaagggatgatgacagacgaagaaatgatgacaggcgg
agagatgatgacaaacggagagatggtagtagggacacggataaaatgtcaacaagtgac
aagaaagggagtgaggaaggaaaaccggacgacaaaaaggatggagagaaggccgctaaa
cctgctgcaaataaagcttcagctctaacaacaaggactggtggtgcctacattcctccg
gctcgtctccgaatgatgcaggctggaataaccgataaaacaagtgtggagttccagagg
atagcgtgggaggcgctgaaaaaaagcatcaatggtcttgtgaacaaagtaaacgtatcc
aacctggtggatatcgtcaaggagttgtttcaggaaaacatcgtcagaggaaggggcttg
ctgtgtcgttcagtgatccaggcccaggcagcctcgcctaccttcactcacgtgtatgct
ggtctagtctctgtcatcaacacaaagtttccacaaattggtgagctgatgatgcgtcgt
ctggtgattcagttccgtcgaggatttaaacgtaatgacaaagccttgtgtctatccaca
acacgcttcctagcccacctagtgaaccagcaagttgcacacgaggttatagctctggaa
atattgaccctattactggagaatcctacagatgactcggtagaggtgtccattggtttc
ctgaaggagtctggtcagaagctgactgaggtgtcgccccggggaatcaacgctatattt
gagagactgcggaacatcttacatgagggcatgatagaaaaacgtgtgcagtacatgatt
gaggtcatgtttgctgtcaggaaagacgggttcaagtgtctcatcctaaggagtgaaagg
aaaaacagtcatattctggacgaggatagctcagacgaggatgggtctggtagcgggtcg
ggtagtgacagtgaaagtgaggatgatgaagagaaagaagctgcgaaccaggtgatcatt
gacaagacggagacaaatctggtggctctacgtcgtaccatctacctcacaattcagtct
agtctcgacttcgaggagtgtgctcacaaacttctcaagatggaactcaagcctggccag
gaggtggaattgtgtaacatggtgctggactgttgcgggcagcagagaacctatgaaaag
ttctttggtctcttggcacagagattctgtatgattaacaagaagttcataggcccattc
caggatatgttcaaggagcagtacgaaactacacaccgtctggagaccaataaactccgc
aatgtggccaagttcttctcccaccttctacacactgatgccatttcctggggggtgctg
tcctgtgtgagactgaatgaagaggacacaacctcggccagcaggatcttcatcaagacc
ttgttccaggaactctccgagtatatgggccttcctaagctgaacaatcggcttcgggac
ccgactctggtccagttctttgagggcatgatgccacgtgacaacccaaggaacaccaga
tttgctattaattttttcaccactatcggacttgggggactgacggatgaccttcgagaa
catcttaaaaacaagtctaaacagttaatgcagcagaaggcagctgaggctgacgaggaa
tcatcatcctcctcttcatcatcatcatcctcatcatcttcatcctcttcttccgattca
agttcatcttcttcatcagagagctcatcagatgacgacaaacctacaaaaaggaaaaag
tcaaccaaggatagtaagggtaggcaacagaaagaaaagcaagccaggaaagaaaaaagt
cttatcaatgctaaacaacgaaaacagagaaacgattcgtcgtcagaggaggaagaagaa
aaaatcaggaaggaaaatagaaaggaaaaaaaggcaaaagatactccaaggagtgtaaag
gataaaaaagaagtaaacagaaatatcaataggggaaagagagatgattcagaggaggtg
attatagaacgacagaacaaccgagggagagactaccgtgaacatgctgatgaaggaaat
aagacagggaggagggataaaaaaggcaggaaggatgatagtggctctgaggatgatagg
agagtgaggaggggagggagcaatcagagaaatgatcgacaggcaggaaacgatcgcggg
aacgaaggacgaaacgatcacgggaaagagggacgaaacgatcgcggaaaaggtagagaa
gatagtgattccgaggaagaggaagtgatggatagaagtagaagtaacagaaaagatcgg
tctagaaccagcgatcctggacaaataagcgatcgacaacagagcaatgatagacagagt
agaaaggatcgacataataggaatgatcgccagcaaagtaatgatcgggaaagtagaaac
gatcgactgcaaagcaatgatcggcgaaaaagaaatgatcagcaagaaaataatgaaaga
cataatagaaatgatagacaggaaaaatatgaacgccagaatagaaatgatcgacaagaa
agtttcgaaagacaaagtaaaaataatcggcaacaaagttatgatagacaaagtagaaat
gatcggcaagaaatttacgaaagacaaggtaaaaataatcggcaacaaagtaatgagaga
caaagtagaaatgatcggcaacaaagtaatgaaagacaaagtagaaatgatcggcaacaa
agttatgatagacaaagtagaaatgatcggcaacaaagtaatgaaagacaaagtagaaat
gacaggcaacgaagacagagagcggacagtgattctgatgaggaagaaatgaatacaagt
aaaatcgggagaaatgatgaaaggcagcaaagaaataaaaaacgaagtagacagaatgaa
agtaatgatgaggaagtaacagatagaaagaaaagtagaggaaaagaaagtcagagggat
acagaaaatgataaaaggcagcaaaggaatgaaaaacgtaggcgagaacaaagtagtaat
tcagaggaggaagtgattgagcgaaggaaaagcagtggaaaagcgaatcaaagatattct
gaaaaagatgtcagatcacaaaggaatgatggtaagcaacagcggagacagcaagcaggc
agtgattctgaggaggaaatggaagacagaaggaaaagtaagggtaatctgagaaagaat
gaaaacgattccaggcaaagaaatgaaaggcaacctgctagaaggggtgttggaagtgag
tctgaagaagaaattgtagatcgtagaaatagtaggggacaagataactcgagaattaat
aatgatagaaggccacagatggataaaagacaaaggaaggaagaaactagtgattcagag
gaagaggttgcagacagaaggaaatctcaaggaaaggttaaaagtgttgtaaatgacaaa
agggaaccgcagaaacatcgagcagctgtaaggaaggaagccagcagtagtagtagtagc
agcagcagtggcagtggttccagtagtagtagtggtagtagtagtagtagctccgactct
gactccgactcggctgaggaagtcgtggtggaacccaaaaataaggataaaattaagagt
aaaccaaaatctacaaacgatacatatttcgatccgtgggaaaggcaaaagaaaggtaaa
gacgaaaaacaggaaagctctgcaaagggagctaaatctaccaaacataacagaagtaca
gaaaaagtcggcaaaaaggcaaggatggatagttcttctgaggaaagtagtgaggaggaa
agagtagtggaacggtacagcaagtcagataagtctagagaacaatcacgcagaattgat
aggatcgctcaagaaagtgaaagtgaggaagacgatcatcaagacaaatatactgagaat
gtgcagaaaaaagagaggcaatcccataacggtggagaggtgcagaggtccagaacaagg
gaacagactcgagagaagccagagaaaaaacagcaacagcaggtggaaagttctgaagaa
gaagtacaacactttgataggggagatagggctcaaaagagggacaagaagtcatttgta
agggacgaggaagaaagttcatacacatctcgcgaaaaatacaggaaaaaagaggcatat
tcagatagtgaggaggaggaggtgaactacggcaggaaagggaaatctagtactaagtcc
cgagatacttcacgggacgaatctatggacaaatcttatgaaaaatcaaggaaaaaggac
caacgtgaatcgcgggaagagtacgaggaaagtcctcggagattgaatagcaaattaaca
aaaagttctcctgtggtaaaaaataagtctgaaattcaggaacgattgagcaagattgca
agtggtgaggatatgcaggattataatcgtagtgaaagagcaatagacaaatacaataca
cgctcgcccgacagatccaataacagggacagatacaagagtaggtctcgctctcctgta
cgtagggagagggaggtcgacagccaccggggatacgggggcagaaggaggtga
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