Mizuhopecten yessoensis (Yesso scallop): 110452717
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Entry
110452717 CDS
T05079
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110452717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110452717
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110452717
Complex C
U5 SnRNP specific factors
110452717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110452717
NCBI-ProteinID:
XP_021357041
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MAFPYMIGPGGQPFIIQQIPMIPQPVLQVPPQQMPPPVAPPPQQPKVPDYMSEDRLNEKS
HKWTQLQSKRYSEKRKFGFVDAQKEHMPPEQVRKIIRDHGDMTNRKFRHDKRVYLGALKF
MPHAVLKLMENMPMPWEQIRDVDVLFHLTGAITFVNEIPWVIEPVYIAQWGSMWIMMRRE
KRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDSDEDKPVMEWFYDHKPLT
ESRNVNGTTYRRWGLTLPVMSVLYRLANQLLTDLVDYNYFYLFDLKSFFTAKALNMAIPG
GPKFEPLVKDKEHQDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNSMPYKVHLSWYHTP
NVVYIKTEDPDLPAFYFDPLINPISHRHAAVKSEILPDDDEEFELPDYVQPFMQETPLYS
DNTANGIALLWAPRPFNLRSGRTRRAMDIPLVKAWYREHCPSGMPVKVRVSYQKLLKYFV
LNALKHKPPKAQKKRYLFRSFKATKFFQTTQLDWVEVGLQVCRQGYNMLNLLIHRKNLNY
LHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLGNVDAFQLA
DGQQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGPVGKGPGCGIWSPGWR
VWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILD
MMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKAKADWWTNTAH
YNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVH
WLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPH
EALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRL
FPPWIKPADSEPPPLLTYKWCQGINNLQDVWDTSEGECNVMMESHYEKMYEKIDLTLLNR
LLRLIVDHNIADYMTAKNNVVINYKDMNHTNAYGIIRGLQFASFIVQYYGLVLDLLVLGL
HRASEMAGPPQLPNDFLTFQDVNTEAAHPIRLYSRYIDRIHIFFRFSAEEARDLIQRYLT
EHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTILWDNSFV
SVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEVTKERTAQCFLRVDDE
SMSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKI
QTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRS
GMSHDEDQLIPNLYRYVMPWESEFIDSQRVWAEYTLKRQEANAQNRRLTLEDLEDSWDRG
IPRINTLFQKDRHTLAYDKGWRVRTEFKAFQVLKQNPFWWTHQRHDGKLWNLNNYRTDMI
QALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFT
LWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQ
VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNMSKPSLLADSKDVMDNT
TTQKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIGIDLAYNLHSAY
GNWFPGCKPLIQSAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQ
IIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQ
LAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQA
CLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRTKIVLK
PDKTTITEQHHIWPTLSDEEWMKIEMQLKDLILADYGKKNNVNVASLTQSEIRDIILGME
ISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETSTFASKTEWRV
RAISATNLHLRTNHIYVSSDDIKETGNTYILPKNVLKKFIIISDLRAQIAGYLYGVSPPD
NPQVKEIRCIVLPPQWGTHQTVHLPNILPESEYLKEMEPLGWIHTQPNELPQLSPQDITT
HAKVMGDNPAWDGEKTVIITCSFTPGSCSLTAYKLTPTGCEWGRQNTDTGNNPKGYLPSH
YERVQMLLSDRFLGFFMTPSQSSWNYNFMGVRHDPNMKYELQLSNPKEFYHEVHRPSHFL
NFSSMEEGELGSSDREDLFM
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccatacatgatagggcctgggggtcagccctttatcatccagcagatacct
atgatcccccagccagtattacaggttccgccccagcagatgccccctcctgtagcccct
ccccctcaacagccgaaagtgcctgattatatgtctgaggaccgtctaaatgagaaatcg
cataaatggacacaacttcagtccaagcgctacagcgagaaaagaaaatttggattcgta
gatgcacagaaggaacacatgccaccagaacaagtccgaaaaattatccgagaccatggt
gacatgacaaacagaaagttccgacacgataagagagtttatcttggtgccctgaagttt
atgccacacgctgtccttaagctaatggagaacatgccgatgccatgggaacagattcgt
gatgttgacgtattgttccatctcacaggagccatcaccttcgtcaacgagataccctgg
gtcattgaacctgtgtatatagcacagtggggatcgatgtggatcatgatgcgacgagag
aaaagagatcgtcgtcactttaaaagaatgcgtttcccaccatttgatgatgaagaaccg
ccattggactatgcagacaacatccttgatgtagagccgttggaagccattcagatggag
ctggactcggatgaagacaaacctgtcatggagtggttctatgaccacaagccactcaca
gaatcgagaaatgtgaatggcactacgtaccgccgctggggactgacactgcccgtgatg
tcagtattgtaccgtctggccaatcagcttctcacagatctggtcgactacaattacttc
tacctgtttgatctcaaatccttcttcacagccaaggcacttaacatggccattcccgga
ggacccaagtttgaacccctggttaaggacaaggaacaccaggatgaagactggaatgag
ttcaacgacatcaacaagatcattattagacagccaatcaggacggagtatcgcattgcc
ttcccgtacctatataacagcatgccctacaaagtacacctgtcctggtaccacaccccc
aatgttgtgtacatcaagacggaggaccccgatctgccagcattctactttgatcccctc
atcaaccccatttctcacagacatgctgccgttaagtcggagattcttcctgacgatgat
gaggagtttgagctgccagactatgtccagccattcatgcaagagacaccgctgtactct
gacaacacagccaacgggattgccctgctgtgggcccctcgaccttttaatctgaggtcg
ggtcgtacacgccgcgctatggacattccactggtcaaggcttggtaccgagaacactgt
ccatcaggcatgcctgtcaaggtgcgcgtgtcctaccagaaactgctcaagtactttgtc
ctgaatgccctcaaacacaagccaccaaaggctcagaagaaaaggtacctgttccggtct
ttcaaggcaacaaagtttttccagacaactcagctggactgggtggaggtgggacttcag
gtgtgtcgtcaaggttacaacatgttgaacctccttatccatcgaaagaacctcaattat
ctccatctcgactacaatttcaacctaaagcctgtcaagaccctcacgaccaaggaaaga
aagaagtccagatttggaaacgcattccatctgtgtcgtgagattcttcgtctgaccaag
ctgatcgtggacagtcatgtgcagtatcgccttggaaacgttgacgccttccagctagct
gacggccagcagtatgtgtttgctcatgttggccagctgactgggatgtacaggtacaag
tacaagttgatgagacagattcgaatgtgcaaggacctcaaacacgtcatttactacaga
tttaacacgggaccagttggtaagggacccggctgtggtatctggtctcctggctggagg
gtatggcttttcttcatgcgtggcattacacctttactagaacgttggcttggcaacctg
ctgtcccgtcagtttgaggggcgacactccaagggagtggcaaagacggtcaccaagcaa
cgagttgagagtcattttgatctggagctcagggcggcggtgatgcatgacatcctagat
atgatgccagagggaatcaaacagaacaaggccaggaccatcctacagcatctgagtgaa
gcctggaggtgctggaaggccaacatcccttggaaggtgcccggactgccgatacccatt
gagaacatgatcttgcgatatgtgaaagccaaagcagattggtggacgaacaccgcccat
tacaacagggaacgaatcagaaggggtgccactgttgacaagaccgtgtgtaagaagaat
ttgggtcgcttaactcgtctgtacctgaaggccgagcaggagagacaacacaactacctg
aaggacggcccctacatcacagctgaggaagccgttgccatctacacgaccacagtccac
tggcttgagagtcgacgattctcccccatcccgttcccacctctctcttacaaacacgac
accaagctccttattctggctttggagaggttaaaggaagcatatagtgtgaagagccgt
cttaaccagtcacagagggaggagctgggactgatagaacaggcctacgacaatcctcac
gaggctctgtctcgtatcaaacgtcatctactcactcagcgagccttcaaagaggttggt
attgagtttatggacctgtatagccatttgattcctgtgtatgacgttgaaccactggag
aagatcacagacgcctaccttgaccagtatctatggtacgaggctgacaaacgacgtctg
ttcccaccctggatcaaacctgcagactcggagccacctccactcctcacttataagtgg
tgccagggcatcaacaacttacaggatgtatgggacacgagtgaaggagagtgtaacgtt
atgatggagtcccactatgagaagatgtacgagaagatagatctgacactgctcaacaga
ttgttacgtctcatcgtggatcacaacattgctgattatatgacagctaaaaacaacgtt
gtcattaactataaggacatgaaccataccaatgcttatggaataatccgtggcctccag
tttgcttcgttcatcgtgcagtactacggcttggtactggacctgttggtgctgggtcta
caccgcgccagtgagatggctggtccacctcagctgcctaacgactttctcaccttccag
gatgtgaataccgaggctgcccaccctattcgtttatactcacgttacattgatcggata
catatcttctttagattttctgcagaagaggcccgagatcttatccagcgttaccttaca
gaacatcctgaccccaacaatgagaacatagtcggatataacaacaagaaatgctggcct
cgagactccagaatgaggcttatgaaacatgacgtgaacttggggcgtgcagtgttctgg
gacatcaagaatcgtttgccgaggtcagtgaccacgatcctgtgggacaacagttttgtg
tctgtatacagtaaggacaatccaaaccttctgttcaacatgtctggcttcgagtgtcgc
atcctgcccaagtgtcgcacaacacacgaggaattcacacacagagacggcgtttggaat
ctccagaatgaggtgaccaaggagagaacagctcagtgtttcttgcgagtggatgatgag
tctatgtctcgattccacaaccgggtacgtcagattctcatggcatctggatcaacaaca
ttcacgaagattgtcaacaagtggaacaccgctcttattggcctgatgacatatttccgt
gaggccgtcgtcaatacacaggaactattggacctactcgttaagtgtgaaaacaaaatc
cagacacgtatcaagattggtctcaattctaagatgcccagtcgtttcccaccggttgtg
ttttacactcctaaggagttgggtggactcggaatgctgtccatgggtcacgttcttatc
ccacaatcagatctgcggtggtcaaagcagactgatgttggtatcactcatttccgttcc
ggtatgagccacgatgaggatcagctcattccaaatttatacagatatgtgatgccatgg
gaaagtgagttcattgactcgcagcgagtgtgggccgagtacaccctgaaacgacaggaa
gccaatgctcagaacaggcgtttgaccctggaggacttagaagacagctgggaccgtgga
atcccaaggatcaatactttgttccagaaggaccgacacacactcgcctacgacaaggga
tggcgggtccgaaccgagttcaaagccttccaggtactgaagcagaatccattctggtgg
acgcatcagcgacacgacgggaagttgtggaacctgaacaattaccgcacagacatgatc
caggctctagggggcgtggagggaattctggaacacacactcttcaaggggacatacttt
ccaacctgggaaggtctcttctgggagaaggccagtggatttgaagagtcgatgaagtat
aagaaacttacgaatgcccagaggtctggtctcaaccagatccccaaccgtcgcttcaca
ctgtggtggtccccaaccatcaacagggccaatgtatatgtaggcttccaggtacagctc
gacttgacaggtatcttcatgcacggcaagattccaaccctgaagatctcactcatccag
atcttccgtgctcatttgtggcagaagatccacgagagcgtagttatggatctttgtcag
gtgtttgaccaggaactagatgccctggagattgagacagtccagaaggagaccatacat
ccacggaagtcgtacaagatgaacagctcgtgtgccgacatcctcctgtttgctgcttac
aagtggaatatgtccaaaccctcgctcctggccgactccaaagatgtgatggacaacacc
acaacccagaagtactggctggacatacagctgcgttggggcgactatgactcgcacgac
attgagcgctacgcccgagccaagttcctcgactacacgacagacaacatgagtatctac
ccgtctccgacaggtctgctgatcggcatcgacctggcctacaacctgcacagtgcttat
ggtaactggttccctggctgtaagcccctgatccaatcagccatggccaaaatcatgaag
gccaaccctgcgctgtatgtgcttcgggagcgcatcagaaagggcctgcagctctactcg
tctgagcccaccgagccctacctgtcctcacagaactacggcgagctcttctccaatcag
atcatctggtttgtggatgacaccaatgtctaccgagtcaccatccacaagacatttgag
ggaaaccttacaaccaagcctatcaatggtgccatcttcatctttaatccccgaactggt
caacttttcctcaagatcattcacacgtcggtctgggctggacagaaacgtctcggacag
ttggccaaatggaagaccgcagaggaagtagctgccctgattcgttcgctcccagtggag
gagcagcccaaacagattattgtcacaaggaagggtatgctggaccccctcgaggttcat
ctcctcgacttccccaacattgtcatcaagggcagtgaactccagctccccttccaggcc
tgtctcaaggtggagaagtttggagacctgatcctgaaggctacagagccacagatggtg
ttgtttaacctgtacgacgactggctcaagaccatatcgtcttacacagcattctctcgt
ctgatcctgatcctgcgagcattgcacgtcaacaatgaccggactaaaatagtgctgaag
ccagacaagaccacgatcaccgagcagcaccacatctggcccaccctgtcggacgaggag
tggatgaagattgaaatgcagcttaaggacctcatccttgccgactacggcaagaaaaac
aacgtcaacgtagcgtcacttacgcaatcagaaatccgtgacatcatcctgggtatggag
atctctgccccttcagcacagcgtcaacaaatcgcagagattgagaaacagaccaaggag
caatcgcagcttacagcaaccactacacgaactgtcaacaagcatggagatgaaatcatc
acctcaacaaccagtaactacgagacatctacttttgcatccaagacagagtggcgagtt
cgtgccatctctgcgacaaacttgcatctgcgtacaaaccacatctatgtgtcgtcagat
gacatcaaggagaccggtaacacatacatcttaccaaagaatgtgctgaaaaagttcatc
attatctccgatctcagagctcagattgctggctacctgtatggggtaagccccccagac
aaccctcaggtgaaggagatacgatgtattgtcctgccgccacagtggggaacgcaccag
accgtccatctccctaacatcctcccagagtccgagtacctcaaggaaatggaaccccta
ggttggatacacactcagcccaatgaactgccccagctgtccccccaggacatcactaca
cacgccaaggtcatgggagataaccccgcctgggacggagagaagacggtcatcatcaca
tgtagcttcacgcctggctcctgctcactgaccgcttacaaactgacccccactgggtgt
gagtggggccgtcaaaacacagacactggaaataaccccaagggttacctcccctcgcat
tacgagcgtgtacagatgttgttgtcagataggttcctgggattcttcatgacgccatca
caaagctcctggaattacaacttcatgggtgtacgtcacgaccccaacatgaaatacgaa
ctacagctgtcaaacccaaaggagttctaccacgaagttcatcgaccctcacacttcctt
aacttctcctctatggaggagggagaacttggcagttcagacagagaagatctcttcatg
tga
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integrated database retrieval system
