Mizuhopecten yessoensis (Yesso scallop): 110452956
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Entry
110452956 CDS
T05079
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110452956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110452956
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110452956
Complex C
U4/U6.U5 tri-SnRNP related factors
110452956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
110452956
NCBI-ProteinID:
XP_021357394
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MAPNNPLPIWGNEKTMNMNPLILTNIQSSPYFKVNLYELKTYHEVIDEIFYRVEHLEPWE
RGSRKTAGQTGMCGGVRGVGAGGIVSSAYCLLYKLFTLRLTRKQLTGLITHQDSPYIRGL
GFMYIRYTQDPKELWDWYEPYLEDEEEIDVKAGGGHVMPIGEMIRQWMTKLEWYSTLFPR
IPVPVQKDVMQKLKNHKWSRPEEEEEEEPQIATTTQPQHIPDEELSFGEAERMSHKRRSP
ERGTSSPQHSRRSPRRSPVRRSPHRRSPDRRRSPHHKSSPDHRRHSPDHHRSKGRRPSPS
RRPAQSSGGDFARDLQRERERQNRTKGKESQPRSRERKRSHSRERHFKKSSKHSHRDRRS
RSRSRERHRDRHGREKHRNGDL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaacaatccgttaccaatatggggcaatgagaagaccatgaacatgaaccca
ctgatattgacaaatatacagtcgtctccctacttcaaagttaacttgtatgaactgaag
acatatcatgaggttattgatgaaatcttctacagggtggaacatttagagccttgggaa
agaggcagcaggaagacagctggacagactggcatgtgtggaggggtacgaggtgtgggg
gctggagggatagtgtccagtgcctactgtctgctgtacaaactgtttacactgaggctg
acacgtaagcagttaactggactgatcacacaccaggactctccctacatacgtggcctg
ggattcatgtatatcaggtacacacaggaccctaaggaactatgggattggtatgaacct
tacctggaagatgaggaggagatagatgttaaggcagggggagggcatgtgatgcctatc
ggtgaaatgattcgtcagtggatgaccaagctggagtggtactccacattgtttccccgc
attcctgtacccgtgcaaaaagatgtgatgcagaagctgaagaaccacaagtggtcccgc
cctgaggaggaggaggaggaggagccgcagatagccacaaccactcaaccacaacatata
cctgatgaggagctaagctttggggaggctgagaggatgtcgcacaaacgcaggtcacct
gaaagaggcacatcatctccacaacattcacggcgatctccacggcggtctcctgtccgt
cgctcaccacatcgacggtctcctgatcggcgccggtcaccacaccacaagtcgtcacct
gatcatcgcagacattcaccagatcatcaccgatccaagggaagacgaccttcaccttca
aggagacctgcacaatcaagtggtggtgattttgcacgtgacttacaaagagagcgtgag
aggcaaaaccggacaaagggcaaagaaagccagccgaggagccgcgaacgcaaacgctca
cacagcagggaacgacattttaaaaagagttcaaaacactcccacagagataggagatca
aggtcacgtagcagggaacgacatagagacagacatgggcgagaaaagcatagaaatggt
gacctttga
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