Mizuhopecten yessoensis (Yesso scallop): 110454411
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Entry
110454411 CDS
T05079
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110454411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myi03009
]
110454411
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
Pre-60S particles
RNases
110454411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Bacteriocin_II
Motif
Other DBs
NCBI-GeneID:
110454411
NCBI-ProteinID:
XP_021359572
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MFRTAGYYRGVNCPYFASGLCERPHCHFRHVKQDQNEDLNSRPKTPTPSKDASSYLEKLS
DGQFPLTSESIKSYSKDNDVDVDEEKSNNHQILNKYTGEPIINEKSECYELGPNINEVNK
YTGKPVEYNKYTGEPIYHKEDSSSSSLNKRWTEAVLGSDTPTYNPTPLSELQKRNANPNL
NKYSLLASTISSSQEYDPESNYSTSTKVHHVSVPQVGRPSYSSKRSCSYDPANVKYKKPV
LKRQRVASFFDAKFSSDEEEENKNVEKDGKDEKTVSSDKEDKFHLKDVNYFEKLLDGPKD
VDEKKSRVKVESDDSLDSLDEDVDVTPLLEKCRRRSQSGGNEQDSTEEKTDVKSKVSNVD
TGDSSSLHSKTETVSKKGKESSDLTDKKTKKKSTAESVPSTGDKNDKSTEICDRNDKKNH
IASSSHSKSSHHGSNKSQKETSSSKISQGNGISTHKSTKESSKNSQPGTSNSSHKSSKES
SSKSSHHHKTEYSKSSHNSDKSSHHSSSKKPHSSTSLCKVKDKSKSRDSQDSKSSETENH
LVCDTDKSNDLSKSSSSSSSSNNHRKHSRHSNSESSSSSSDKHQHNSERGHDTNSVHTSS
HSSGSSKGSKDMKNRAKQKDDKTSKNDKKRTKSVSSERRKSSETIKKKIVDINIDLFGAN
SEDEEDDEDLVEVPMASDGHISESDMVAFLNDSDYSDEDIDRYDECLRIFQENKGVKNNT
NKKKSSPEKSHDAQNPSAPSGKQRMAHKKESEIMRKLKVFEKPKSKMSPAEVMHNRFLQI
QEKARNAAAAAATSNNGTASSSTAKTFMLSGSKKRTAHNLSTSKSNGTSTDKAVISTASR
TEKRKARTPHVSNLARPTIPSEFGGKVPMNVRQRYLNLIIDDCLKIYDTDKEAFDRGQQE
ESAVYKRASSKTVYLNIAVNTIKRLRSEQAGPSNSKKPKQTVFTLSHEQILGGKNATKTT
FTINRSGGGSKIQEENFKGADLYKRLSRYILVEEQMKENGFPRPSPTEPGSAVFFVEPRK
KINVQSSKPTNYEKLCIRCGKMFTVYPNGTYAKTEECTFHWGKAWKKRVAGMIDTRYTCC
QGDLTTDGCQIAKGHVHETNKWETMSGYMKTFPCSPPCDGDYGVFAMDCEMVYTKFGIEL
ARVTVTDPENDCVYETLVKPDAAVVDYNTRFSGLTEEILKDVTTTLRDVQAVLLSLFSDR
TIVMGHSLESDFSAVRLLHNTVVDTSVVFPHKMGPPYKRALKTLMAEYLKKIIQDDVGGH
DSKEDSTSCMELMHLKIKEDARKEPRRS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcactgccggttactatcgtggtgtgaattgtccatactttgccagcggactt
tgtgaacgcccgcattgtcacttcagacacgtcaaacaagatcagaatgaagatctgaat
agcaggccaaagactccaactccctcaaaagatgcaagctcatatttggagaagctctct
gatggacaattcccattgaccagtgaatctatcaagtcctactccaaggataatgatgtg
gacgttgatgaagagaaatctaacaatcaccaaattcttaacaaatatacaggtgaaccc
ataatcaatgagaaaagtgaatgttatgagttgggaccaaatataaatgaagtcaataaa
tacacggggaaacctgtggagtacaacaaatacactggagaacctatttatcataaagag
gatagttcatcgtcatctctgaacaaacgatggacagaggcggtgcttgggagtgacacc
ccaacctataatcctactccattaagtgaattacagaagagaaacgcaaatccaaatctg
aacaaatattcattgttggcaagtactatctcttccagccaagagtatgatcccgaatca
aactactccacctcgaccaaagtccaccacgtgtccgttccacaggttggccgtccctcc
tacagcagtaagaggtcctgtagctatgatcctgcaaatgtcaagtataaaaaaccggtt
ctcaaaagacaacgtgtggcttcattctttgatgcaaaatttagttcagacgaagaagaa
gaaaataaaaatgttgaaaaagatggaaaagatgaaaaaacagtttcaagtgataaggaa
gacaaatttcatctgaaggatgtcaattactttgagaaacttttagatggacccaaggat
gtggatgaaaagaaaagtcgtgttaaggttgaaagtgatgattccttggattctctggat
gaagatgtggatgtcacaccgttacttgaaaagtgtcgaagacgttcacagtctggggga
aacgaacaggacagtacagaggagaaaacagatgttaaatccaaagtctccaatgtagat
acaggggacagttcctctttacactctaaaacagaaaccgtctctaagaaaggcaaagaa
agctctgatttaactgataaaaagacaaagaaaaaatccacagctgaatcggtccccagt
actggtgacaaaaatgacaaatctactgaaatttgtgatagaaatgacaagaaaaatcat
attgcttcgtcatcacattcaaaatcttcccatcatggatcaaataaatcacagaaggaa
acttcatcatcaaaaatatctcaggggaacgggatttcaactcataaatcaactaaggag
tcatcgaaaaattcccaacctgggactagtaattcatctcacaaatcttcaaaggagtcg
tcatcgaaatcctcacatcatcacaaaaccgaatatagcaaatcttcacataacagtgat
aagagctcacaccactcttcatcgaaaaagcctcattcaagcacatcgttatgtaaggtc
aaggacaaaagcaaatcccgagattcacaagacagcaaatcgtcagaaactgaaaatcac
cttgtgtgtgatactgacaagtcaaacgatttatcaaaatcatcatcatcttcatcatca
tcaaataatcatcgcaaacattcacgacattcaaattctgaatcatcgtcgtcatcttca
gacaaacaccagcataattcagaaagaggtcacgatacaaattctgttcacacttcgtca
catagctcggggtctagtaaaggtagcaaggacatgaaaaatagagccaaacaaaaagac
gacaagactagtaaaaacgataaaaagcggaccaagtcggtgagttctgaaaggcggaag
tcttcagagacgatcaagaaaaagattgtggacatcaacattgatctttttggtgcaaac
agtgaggacgaggaggacgatgaggatttggtggaggtgccgatggcgtcagacggacat
atatcggagagtgacatggtggcgtttctcaatgatagtgattactccgatgaagacatt
gacagatatgatgagtgtttaagaatctttcaggaaaacaaaggagtaaagaataacacc
aacaaaaagaaatcatctccagaaaaatctcatgatgcacagaacccatcagctccttct
ggcaagcaacgtatggcacacaagaaagaatcagagattatgaggaaactaaaggtgttt
gagaaaccaaagtcgaagatgtctccggccgaagtgatgcacaaccgtttcctccagata
caggagaaggctcggaatgctgctgctgctgctgctacttcaaataatggaacagcctcg
tcctcaacagcaaaaacatttatgctgtctgggagtaaaaaaaggactgcccacaaccta
tctacctcaaaaagtaatggaacctccacagataaagcagttatcagcacagcatcgcgg
acagaaaagaggaaggcacgcacccctcatgtttctaacttggcaagaccaacgattcca
tcagagtttgggggtaaagtgccgatgaacgtccgtcaacgatatctcaatctcatcatc
gatgattgtctcaaaatttacgatactgataaggaagcatttgataggggccagcaggag
gagtctgcggtctacaagagggcttccagtaagactgtttacctcaacattgctgtcaac
accattaagagacttcgttccgagcaggctggcccatccaactccaaaaagccaaagcaa
actgtattcacactgtcacatgagcaaattctcgggggcaaaaatgccacaaagactact
tttacaatcaatcgatctgggggtggttctaaaatacaggaggaaaactttaaaggtgct
gacttgtacaagcgcctaagccgatatattctggtagaggaacagatgaaggagaatggt
tttcctagaccctctcccactgaaccaggctcagcagtgttctttgtggaaccaaggaag
aaaatcaatgtacagtcgtctaaaccaacaaactatgagaaactctgtatccgatgtggc
aagatgttcaccgtgtaccccaacggaacgtatgccaaaacggaggagtgtacctttcac
tggggcaaggcatggaaaaaacgtgttgctggtatgattgacactaggtatacgtgttgt
caaggtgacctaacgacagatggttgtcagattgccaagggccatgtccacgaaaccaac
aaatgggagaccatgtctgggtacatgaagacttttccatgctcaccaccgtgtgatggg
gactacggggtgtttgctatggactgtgaaatggtgtacacaaagtttggaatagagctg
gcgcgagttactgtgactgacccagaaaatgactgtgtgtacgaaacacttgtcaaacca
gatgctgctgtcgtggactataacacaaggtttagtggactgacagaagagatcctgaaa
gacgtgactaccacgctgagggatgtgcaagctgtactgctcagcctcttctccgaccga
accatcgtcatgggacacagtcttgagagtgatttctctgctgttaggctgctgcacaac
acggtcgtggacacctcagtggtgtttcctcacaagatgggaccaccctacaagagagcc
ctcaagacactcatggcggaatacctgaagaaaattatccaagatgacgttggtggccat
gacagcaaagaagattccacatcttgtatggagctgatgcacttgaaaattaaagaagat
gcgcgtaaagaaccaaggcgaagttaa
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