Mizuhopecten yessoensis (Yesso scallop): 110454824
Help
Entry
110454824 CDS
T05079
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110454824
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
110454824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
CH
LIM
PDZ_6
PDZ_2
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
110454824
NCBI-ProteinID:
XP_021360220
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MANEEQNEDDAWDLRLRQDEEEDFFTELALHETERWISAVTRKKFQYPDDFRKSLENGVL
LCELLNTIKPGSIKRINKLPVPIAGLDNINVYLQTCRNSFHLNEAHLFDGTDLEDLSQRA
ISESEHILKQESDRRARNVAIGIYWLGKSVYNTYSGPHLDFSAFTPLVHHNGKDLISEEQ
FHQDICEYGEQSSSYGLHEIHDSVGPSFDTKHIRDSAYDSYGSLSNSRESELSFSLEEAN
MPGVQMRRADSTSSINRSGDFSLARNSEDDSLYQSTPDLSHRNSHTRTSSTDSMDGHSRQ
SSDSTKVSIPTRSQERKSSTANANPLQFVKVNSSNDMAKVATMQIKMSEEVKKVRTKPED
DAQEWQSSVLAIEQPWASDQVEDWKANFSDWRNKRRRKSEAQLQRVEETDKNVKEEEEER
KQVKSYGQMVEERERRKSTGTPLLKKPMSFYPVDDDDDLFTSVKVPASAAPIEEVLEKKS
VSKVKSEAPSRQRAKAPMLTPKDRSSSVGSDTYIHYDDTKRASWAASDSSDEESSKKDNS
VELDRLRDTSKNENKNKDKSNSRNTVLDSSDNSWRRKDPSPQRKSGLPGAGTPTKSTGKL
SNLLKSFEQKEEEAKADYSKVKRFSETSTDYSRSGVKKMSSFDLPSSSFSFSAKDKAETT
PVRSTITDKTVPVPTKASVEKSIKISQKPNHLKGFGFVISGGADKREPVIVQKVSLGGAA
DVNEVQQGDKILAINRRDISALAHAQVQRLIEEAVRHGQIELKVKRTISDGDEEDDDDDE
EDAFTARSPTSPVPKLTSALSPRLRGSSGSSSSSSGHNSVSKSPSEYVSPPSGDRYGSGT
RAENRYSSVSPIRSQRTQNQSPGAMKSESYRRSASPVETKNTNSFLTETSHRSGSPLRNQ
NSGSLPTENQQTYSTQDIRNTPGSARLSRRDPSPVTTRKTYTQEDRTGSPLQRSSPLFKS
PSENPSRPSDSKIFPSYAEKSRLEEETNNNDVKVNYVKTELIKPPSPVDNGRGVDETITF
VRKEMDFSSPVQQDVMSLQKAPETETIPKQEVTISTRETITVKKKEPPETKSSYKWEPPA
SPPINSSPPSAAEEEDDGGPPAILRRWQQRKPRPQSAYSAYPAYEPPKEEKRMSASFPWE
SSIINTDKTNDTEPDVESQVIKLEHQENNSMPPPKTQVGQPVTLEIPDHSEAPVKTTSLK
VVSSYNPGLLQIDPRNQMTENDINLPEYSFHVNINNREQTEPRTLSSPATIEQERELIRQ
EEQKILEARKQQWEEEEEEKTRRIQEKEEELQRQAELLQLEKEKLKEEQQRMQREREELE
RSRKHQIATKENKKPESRVFQNHQNNNPKSQFATSANTDSKQSLRKLDLTWPPQKEELPP
RQKLTREDMLAMNRRATPLQRKPEVEVNSAEPSKTKDLSTSREAPTKNDLHNLTAVPKPR
YRAPSNWMKEDQQPQKTVSKSRSDNNRSSPNLHEHWLVEEAERRRKATPNQNSHSGAIQP
VSDGIVNRWRDDSFLPKQQASINAQGSNLTQPRSLSSNVSQGHGLDNRHYTPASQNTKAM
SQTLPQNFNYSSLSPKQRGDPYAPPKQTRTSSSSTASSMSSPSSPLNPSEQFMAVSGKQA
CSYCSQELGFGAAMVIESLGLYYHVQCFRCCVCHQALGNGSQGADVRVRVNKLHCRNCYS
NDEGRSRRGRHS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaagaacaaaacgaagatgatgcgtgggatttacgtttgcgacaagacgaa
gaagaggacttttttacggagttagcattgcatgaaacagagcgctggatatctgccgtc
acaaggaagaagttccagtatccagatgacttccggaaatccctggaaaatggtgtgctg
ttatgcgagttgctcaacaccataaaaccaggcagcatcaagcgaatcaacaagctaccc
gtgccgatagcagggctggacaacatcaatgtttacctgcagacctgccggaactccttt
cacttgaacgaggctcacctgtttgacggtacagacttagaagatctgtctcagagggct
atatcagaatcagaacacatcttgaagcaggagtcagatcgccgggcgagaaatgtagct
attgggatttattggctaggtaaaagtgtgtacaatacctattctgggccacacctagac
ttcagtgcattcaccccccttgtgcaccacaatggaaaagacctgatatcggaagagcag
tttcatcaggatatttgtgaatacggcgagcagtcaagttcatatgggttacacgagata
cacgacagtgtaggaccgtcatttgacaccaaacacatacgagatagcgcatacgactcg
tacgggtcattgtcaaattcacgagaatcggagttaagtttttcgctagaagaagccaac
atgccaggtgtacaaatgcgcagggccgatagtacctcgtctattaatagaagcggcgac
ttctcattggcgaggaattcggaggatgattccctatatcagagcactccggacttatca
cacagaaacagccatactcgaacatcctccacggacagtatggacggacactcccgtcag
tcgtcggatagtacaaaagtttccattccaacacgctcacaggagaggaaatccagcact
gccaatgccaaccctctacagtttgtgaaagtgaattcctccaatgacatggccaaagta
gcgaccatgcaaataaaaatgtcggaagaagtgaaaaaagttcgcaccaaacctgaagac
gatgcacaggagtggcaatcgtcggttttggcaatcgaacagccttgggccagcgatcaa
gttgaggattggaaagcaaatttcagtgactggagaaacaaacgaagaagaaaatcagaa
gcacagttacaaagggtggaagaaaccgataaaaatgtgaaagaggaggaggaggagagg
aaacaagtaaaaagttacggacagatggtagaagaaagggagaggagaaaaagcacaggc
acaccattgctgaagaagcccatgtcattttaccctgttgatgacgatgacgaccttttc
acctcggtcaaggtcccagccagcgcagctccgatagaggaggtcctggagaaaaaatcg
gtgtcaaaggtcaagtctgaggctccgtcacgacaaagggcgaaggctcccatgctgaca
ccaaaggaccgatctagttcagttgggagtgacacatatatacattatgatgacacaaag
agggcttcatgggctgctagtgattcaagtgatgaagagtcaagcaagaaagataactct
gtagaattagacagattacgggacaccagtaaaaatgaaaataaaaacaaagacaagtca
aacagtaggaacacagtgttggatagttcagacaattcttggaggagaaaggatccctct
cctcaaaggaaatcaggattaccaggggctggcacgccgaccaaatccaccggaaaattg
tcaaatttgttaaaaagcttcgaacaaaaggaggaggaagctaaagcagattattccaaa
gtgaaaagattcagtgaaacaagtacggattatagtagatctggagtcaaaaaaatgagt
tcgtttgatcttccaagttctagttttagtttttctgcaaaggataaagcagaaacaaca
cctgtgagatcaactattacagataaaacagttcccgtgccaacaaaggcatcagtcgaa
aaatcaataaagattagtcaaaaaccaaaccatctcaaaggatttggatttgtgatatcg
ggtggtgctgataaacgagagccagtcatcgtacaaaaggtctcacttggcggtgcagca
gatgtgaatgaagtacaacagggtgataagatactggctataaatagacgtgacatctcc
gctctggctcatgcccaggttcagagattgatagaagaagccgttcgtcacggtcagatc
gagctcaaggtcaaacgcaccatcagtgatggagatgaggaagacgatgatgatgatgag
gaggatgcattcacggcccggtccccgacatctcctgtgcccaagctgacatctgcacta
tcgcctcggctacgaggatcctctgggtcctccagctcctcttcaggccacaattctgtg
agcaagtcaccctcggagtatgtaagtcccccatcgggagacagatatggaagtggcact
cgtgcagaaaaccgttacagttctgtctcaccaattaggtcacaaagaacacaaaatcaa
tctcctggtgctatgaaatcagaatcctatcgaaggagtgcctcccctgttgaaaccaaa
aacaccaactcattcctgactgagactagccacagaagtggttcacctttacggaaccaa
aacagcggttcattacccacagaaaaccaacaaacctattcaacccaagacatcagaaat
acaccaggctctgctcgactgagtcgtcgtgatccgtcgcccgtgacaacaaggaaaaca
tacacccaagaggataggacagggtcacctctacagaggtcatcgccattgttcaagtct
ccttcagaaaatcccagcaggccttccgacagcaagatctttccttcttatgctgaaaaa
tctcgccttgaggaggaaacaaacaacaatgatgtcaaggtcaattatgtcaagacggag
ctcattaaacctccgagcccagtggataatggccggggcgttgatgagacaattacattt
gtcagaaaggaaatggatttcagtagcccagtgcaacaggatgtgatgtcattacagaaa
gcaccagaaacggaaacaattcctaaacaggaagtgactatttccactcgtgaaacaatc
acagtcaagaaaaaggaaccaccagaaacgaaaagtagctataagtgggagcctcctgca
tcccctccgatcaattcatctcctccatcagcagctgaggaggaggatgacggtggaccc
ccagcaatccttagacgttggcaacagagaaaaccccgaccccagtcagcctactctgct
tacccggcatatgaaccaccaaaggaggagaaacgtatgagtgcttcctttccatgggag
tcttccattatcaacacagacaaaacgaatgatacagaacccgatgtagaatcccaggtg
ataaaactggaacaccaagagaacaattcgatgccaccacccaagacacaagtcggtcaa
ccagtcaccttagagattcctgatcacagtgaggctcctgtcaaaacgacgtctcttaaa
gttgtctcctcctataacccaggactgctccagattgaccccagaaaccagatgacagaa
aatgatatcaatttaccagagtacagtttccatgtcaacatcaacaatcgtgaacaaaca
gagcccagaacgttgtccagccccgctaccattgagcaggagcgggagttgatcagacaa
gaggagcagaagatactagaggcaaggaaacaacaatgggaagaagaggaggaggagaag
acaaggaggatacaggagaaagaagaagagttacaaagacaggcggagttgttacaacta
gaaaaagaaaaacttaaggaagaacaacaacgcatgcaaagggagagagaagaactggag
cgcagcagaaaacatcaaatcgcaacgaaagaaaataaaaaaccagaatcaagagtcttc
caaaaccaccaaaacaataatccaaagtctcagtttgcaacttctgcaaatacagacagc
aaacaatcattacgaaaactggatctaacatggccgcctcaaaaagaggagcttccaccg
agacaaaaacttacgcgggaagatatgttagcgatgaataggagagctacgccccttcag
cgaaaacctgaggtagaggtgaactctgctgagccctctaagacaaaggatttatctact
agtagagaagcaccaacaaagaatgatcttcacaacctgactgctgttcctaaaccaagg
tatagggctcccagtaactggatgaaagaggatcaacaaccacaaaagactgtttcaaaa
tcaagatctgataataacaggtctagtccaaacttgcatgaacattggctggttgaggaa
gctgaacgtcggcgtaaagcaacacccaatcagaattctcacagtggcgcaattcaacca
gtgtctgatggaatcgtaaatcgctggcgtgacgattctttcttgccaaaacagcaagcg
tccattaacgcacagggaagtaacttaacgcaacctcgatcgttgtctagtaatgtgagt
cagggtcatggactagataatcgtcattacacaccagcatcacagaacaccaaagctatg
tctcaaacgttaccacaaaacttcaactacagtagtctgagcccaaaacaaaggggagac
ccctatgctcctccaaagcaaacgcgaacctccagctcatctacagcatcgtccatgtca
tcgccttcatccccactcaacccttccgaacagttcatggctgtcagtggcaagcaggcc
tgctcctactgtagccaggaacttggctttggtgctgccatggtgatagagtccctcggc
ctgtattaccacgtacaatgtttccgatgttgcgtgtgtcaccaggccctcggcaacggt
tcccaaggagctgacgtacgagtgcgggtcaacaaactccactgtcggaattgctatagt
aacgatgaaggtcgaagccgtagaggacgacactcctag
DBGET
integrated database retrieval system
