Mizuhopecten yessoensis (Yesso scallop): 110455690
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Entry
110455690 CDS
T05079
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19720
collagen type III alpha
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110455690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
myi00536
]
110455690
Glycosaminoglycan binding proteins [BR:
myi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110455690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110455690
NCBI-ProteinID:
XP_021361644
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MYITALVTTMYTRGVLFVVLFGICVAFRVQQDTASDELVTGINNFEQQLKDIEELISKVR
EEVSQEEAKDEHIMVSRVKRGVYYKRGAPGYAGLTGEPGEKGDDGAPGGPGAQGPAGLDG
DKGDKGSVGPPGVLGVSGNYGPKGVAGSYGPPGQPGLPGRKGEIGFTGVMGDWGSPGSPG
APGPIGAKGERGNFGPAGHQGETGAKGAEGPEGYMGVPGPMGGQGYPGDVGRRGEPGVPG
QPGEPGAAGPVGHPGQIGIPGSPGQAGPSGEEGALELNDLGDFIDQPGPPLGSKLPVFNQ
DTGSPVNFLDSKSNPLPTESLTESEMGYVMAGRKDAPMMVIPGKDAMLGPAMVMSKDGEP
APMFYGKSSEEAPGPAMMISTKDGQQAPMFYGKSSDEMPGPAIMSTKDGQPAQMFYGKSS
VEMPGPAMMISTKDGQQAPMVYGKSSDETPGPAMMLTKDGQPAQMFYGKSSVEMPGPAMV
MTKDGEPAPMFYGKSSDETPGPAMMISTKDGQQATMFYGKSSDETPGPAMMMTTKDGQAA
PMFYGKSSDETPGPVMMMTKDGQPAPAESQWLSKKNVPTFAVMFPYPEIEDMPVGPVSGN
DIDTVETPEEEEQDDEEEEYEEEEEEEEEEYEEEEEEEEEKEEEIEGDAEVEGNEEVQET
EDDQEEEVVQEVDTVEDVDPEIEEIDPEVQEKEEVEPHVGEVEPEVDVVERVQTEVNEEE
EDEPKDEESEEDEPEEGESEKDETEDEELEEEELEDEESLEDEPKDEESDETEQEVEEEE
PTEQEPSAEDDTGGEDGPETEDDQDEEYYETEEEGIEETADYGEEVDNSLAPYIINNDSQ
RTT
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcacagcactcgtaaccacaatgtatacacggggtgtcctctttgtggtcctt
ttcggaatttgtgtcgccttccgagtccaacaggacactgcatcagacgaactggtgaca
ggtataaacaactttgaacagcaactcaaggacatagaagaactgatcagcaaggtgcga
gaggaagtctcgcaggaagaagccaaagatgagcacatcatggtcagtcgagtcaagaga
ggagtgtactacaaaagaggagccccaggatacgctgggcttacaggtgagcctggcgag
aaaggtgacgatggtgctccagggggccctggtgctcagggcccggcgggtctagacgga
gacaagggagataagggctctgttggtccaccaggggttcttggggtgtcaggcaattat
ggaccgaaaggtgtagctggatcgtacggacctcctggacaaccaggtttacctgggcgc
aaaggggagattggcttcaccggagtgatgggagattggggatcacccggaagtccgggt
gcaccagggccaataggcgccaaaggagaaaggggcaattttggtccagcaggtcaccaa
ggggagactggtgcaaagggtgcagaaggacccgaaggttatatgggagtacctggtcca
atgggagggcaagggtaccctggagatgttgggagaagaggagaaccaggggttcctggc
caacctggtgaacctggcgcagcaggccccgtcggccatcctggacagataggcattccc
ggatcaccaggacaggccggtccaagcggcgaggaaggagctcttgagcttaatgatctg
ggtgatttcattgaccaaccaggaccgccgttaggttcgaaactgccagtattcaaccag
gacactggttctcccgtaaatttcttggactctaaatcaaatcccttaccaaccgaaagt
ttaactgagtcggaaatgggatatgtaatggcaggacgtaaagatgccccaatgatggtg
ataccagggaaggatgcaatgctaggcccagcaatggtaatgagtaaggatggcgaacca
gctcccatgttttatggcaaatcgtcagaagaggcgccaggtccagcaatgatgatatca
actaaggacggacaacaagctccgatgttttatggaaaatcgtcagacgagatgccagga
cctgcaataatgtcaactaaagacggacaaccagctcaaatgttttatggaaaatcgtca
gtcgaaatgccaggtccagcgatgatgatatcaactaaggacggacaacaagctcccatg
gtttatggaaaatcgtcagacgaaacgccaggaccagcaatgatgttaactaaagacgga
caaccagctcaaatgttttatggaaaatcgtcagtcgaaatgccaggtccagcgatggtt
atgactaaagacggcgaaccagcaccaatgttttatggaaaatcgtcagacgagacgcca
ggaccagcaatgatgatatcaactaaggacggacaacaagctaccatgttttatggaaaa
tcgtcagacgagacgccaggaccagcaatgatgatgacaactaaagacggacaagcagct
cccatgttttatggaaaatcgtcagacgagacgccaggaccagtaatgatgatgactaag
gacggacaaccagctccagcagaaagccagtggttatccaagaaaaatgtacctacattt
gcagtcatgtttccataccctgaaatagaagatatgccagtgggtccagtcagtggcaac
gatattgatacggtggaaacgcctgaagaagaagaacaagatgatgaagaagaagaatat
gaagaagaagaggaggaagaagaagaagaatatgaagaagaagaagaggaagaagaagag
aaggaagaggaaattgaaggggatgctgaggtagagggaaatgaagaggtgcaagagaca
gaggatgatcaagaagaagaggtcgtacaagaagttgacacagtggaggatgtcgatcct
gagatagaggaaatcgatccagaagttcaagagaaggaagaagtcgaacctcatgtcggg
gaagtagaaccagaggttgacgtagtggaaagagtccaaacagaagtcaatgaagaggaa
gaggatgaaccaaaagacgaggaatcggaagaggatgagccggaagaaggagaatcggaa
aaggatgaaacagaagacgaggaattggaggaggaagaactagaagacgaggaatcgtta
gaggatgaaccaaaagacgaggaatcggatgagactgaacaagaagttgaagaagaagaa
cccacagaacaggaaccatcagctgaggatgacactggtggggaagatggacctgaaacg
gaagatgatcaagatgaagaatattatgagacagaagaagaaggaatagaagaaacagct
gactatggtgaagaggttgataatagccttgctccttatataattaataacgattcccag
agaacaacataa
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