Mizuhopecten yessoensis (Yesso scallop): 110457612
Help
Entry
110457612 CDS
T05079
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110457612
03015 mRNA surveillance pathway
110457612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110457612
03041 Spliceosome [BR:
myi03041
]
110457612
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110457612
Spliceosome [BR:
myi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110457612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
110457612
NCBI-ProteinID:
XP_021364632
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MTDAGFFKGTSADQDNRFSDKKKKLMKSMKFSDELEKKVDMSKVNVDIIKPWIAQKVTDS
LGGYEDDVIVEFVYNQLEERYPDPKEMQINLTGFLNPKNSRTFMHELWELLCSAQENIGG
IPEKFIAQKKEEIKKRQAEKERIQASLKKSEEQIKEALMKERKEQDNKEKDRSPSRRKSR
STSPKPSKSSTDKNDSTNKESVSEIKGGNDAAPSEIKAVQENGEKKDDDDKGKEKDAVNH
KDGDKEVIKDESKEAEKKRKSRSASPSRKKRSRSGDRHRRRKSRSRSNRRSPGRKRSRSR
SRHRSPRRSRPSPRRRSSPYHRRGSSPRRRRSLSPRRRRRPSPRRSPSPRRRSPRRRPPS
PRRDRSPIRRRRSPSPDRKKRAQSNSSGSSSDSDDSSPRKPSGRRSSSADKDDSSADNAD
SPGKQGVQKRRNYRTHGPDANSDSSSSSDDSSSEDEAPAVRGQQRKRSPPYGRPMRRSMS
RERRRPSPYSRRFSPPRRQSPGPWYGNRRSPPRFSPPWRQYRRSPSPPPLRMDRRRMGHS
LSRSPPPYQGRRMRSPPGRFGGEMNRRRSPPPDRRRQFSPSPPPQRRRRMSPDSPPRQRR
MHPEDSPPPRRRGNISNSPEPTRWHLDREESSSSPPQLKKERSPPAARRKRSPDSPPRKR
KVIPKKERVSDSESPPPLSREQQSESESSSWSPEPQPQRQKASTSPQRMARRKPSPSPQQ
RKIREQGSPQQKRRKHESPPPKMRKKDSSDDSSSSSEEGEESSVSPPPPRQTKRSRKSSS
PGPQKSPVPKRRQRSPSPEVQQRRRRSPQSKQRSSPPRSLKKRQQMSPSPSPSPPPKRRD
SRVRDSPERTRHQRQQSPSLRRKQSGSPTRQRRKQSGSPPPQRRRQSGSPPPQRKKPSVS
PVPQRRRESGSPPRQKRRQPSDSPSQKRRQKSGSPSPPRQGELESAPLQRRRQSGSPPQR
RRKQSDSPPAQRGRPSLSPPYQRGKQIRSPARRQWESPSPDGPRQRRGRPSPEPAHRGRG
DERRPSHGRDCRDEDVQRTITINQFKRERDGEASPGSHQGRDDSFMDGEDSLKRKVKDKS
PPSGSDFEGSDDAAGKKKKKKEKKKHKKHKKHKKHKHKKNKDGEIEDEGSDSEDDTAELE
ERKLRERALQSMQKAKASEFSN
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcagggttcttcaagggtactagtgccgatcaggataacagattctcagac
aaaaagaagaagctgatgaaatctatgaagttttcagatgaattggaaaagaaggtggac
atgtccaaagtgaatgttgacatcatcaagccctggatagcacagaaagtcacagactcg
ctcggtggatacgaggatgatgtcattgtggaatttgtttacaaccagttggaagaaagg
tatccggatccaaaagaaatgcagatcaacctgactggcttcctcaacccaaagaattcc
cgtaccttcatgcatgaattgtgggagcttctatgcagtgctcaggagaacattgggggg
attccagagaagttcatagctcagaaaaaggaggaaattaaaaaaagacaagctgaaaaa
gaacgtattcaggccagtctaaagaagagtgaagaacaaatcaaggaagcactgatgaag
gaaagaaaggagcaagataacaaggaaaaagacaggtcaccatcacgcaggaaatcaaga
agcacctcacctaaaccaagtaaaagtagcactgataagaatgactctacaaacaaagaa
tcggtatcggagataaagggaggaaatgatgcagcaccatcagagatcaaagcagtacag
gaaaatggagagaagaaagatgatgacgacaaggggaaagaaaaagatgctgtaaatcat
aaagatggtgacaaagaggtgattaaagatgaatctaaggaggcagaaaagaaaaggaaa
tcccgaagtgccagtccaagccgcaagaaaaggtcaagatctggtgatcgtcataggcga
agaaaatcaaggtcaaggtcaaacagacggtccccagggagaaaaagatccagatctcga
tctaggcatagatcacctcgacgttcaaggccatctccgaggcgcagatcatccccctat
cacagaaggggttcatctccaaggcgccgacggtcactatcaccaagacgccgtaggaga
ccatcaccacgaagatcaccttcacccagacgtcgatctcctcgccgacgccctccatcc
ccaaggagagacaggtccccaattcggcgaaggcgctcacctagtccagaccgcaaaaaa
cgtgcccaaagtaacagctctggttcctccagtgattcagatgattcgtcgcctcgtaaa
ccatctgggagacgatcttcttctgcagacaaagatgacagcagtgctgacaatgctgat
tctcctggcaagcaaggagtacaaaaacgaagaaattatcgcacacatggcccagatgct
aattctgattcttcctcatcatcagatgattcgtcttcagaggatgaagcaccagctgtg
agaggtcaacaacgtaaacgttcaccaccttatggtcgtccaatgcgcaggtcaatgtcc
agagaaaggaggcgcccttcgccctattccaggaggttctctccccctagacgacaaagt
ccaggtccttggtacggcaacaggagatctccacctcggttttccccaccctggcgacag
tatcgcaggtctccctcaccacctcctctaaggatggacaggcgcagaatgggccactct
ctctctagatcaccacctccctaccagggtaggaggatgaggtcaccaccaggcagattc
ggtggtgagatgaacagacgaagatctccgcctcctgaccgtcgtcgccagttctctcca
tcacctccacctcagcgtcgacgaaggatgtcccctgactctcctccacgccagaggagg
atgcacccagaagattccccaccacccagaaggagagggaatatatccaattccccagag
ccaaccagatggcatttggacagggaagaatcttcatcttcacctcctcagctaaagaag
gaacgctccccaccagctgcaagaaggaagagatccccagattcacccccaagaaagaga
aaagtcatcccgaaaaaagaaagagtctctgattcagagtctccaccaccattatcgaga
gaacaacagtctgagtctgaatcatcatcttggtcaccagagcctcaaccacagaggcag
aaagcctctacatcaccacaacgtatggcacgtaggaagccatcaccatccccccagcag
cggaagatcagagagcaaggttcaccacagcaaaagagacgtaaacatgaatcacctcca
cccaaaatgaggaagaaagattcatcagatgattcctcttcctcatcagaggaaggagag
gagtcttcagtctctcctccaccacctcgtcaaacaaagcgatctaggaagtcttcatca
cctggtcctcagaagtcaccagttccaaaaagaaggcaaagatctccttcccctgaagtg
caacaaagacgtagacgctcaccacagtcaaagcaacgttcttctcctccccgtagtcta
aaaaagcgtcaacagatgtcacccagtccttcaccatcacctccaccaaagcgccgtgac
tctcgtgtaagagactctcctgaaagaaccaggcatcaaagacagcagtctcctagtctg
agaagaaaacaatcaggatctcctactcggcaaaggagaaagcaatctggatctcctccc
ccacaaagaaggagacaatctggatctcctcccccacaaaggaaaaaaccatctgtatct
ccagttccgcaaagaaggagagaatctggctctccacctagacagaagagaagacaacca
tctgattctccttcgcaaaaaaggagacaaaagtctggatccccctcccctccaaggcaa
ggggagttggaatcagctcccttacagaggagaagacaatcaggatctcctccccaaaga
agaagaaaacaatcggactctcctcctgctcaacgaggaagaccatctctctctcctccc
tatcaaagaggtaaacaaatccgctctcctgctcgacgacaatgggaatcgccctcccca
gatggtccacgccaaagaaggggtaggccaagtcctgaaccagcacacagaggtagagga
gatgagagaaggccaagtcatgggagggactgcagagatgaggacgttcaaaggaccatc
actatcaaccaattcaagagagagcgtgatggagaagcttctccaggatcacaccagggc
agggacgacagttttatggatggtgaggacagtctcaagaggaaggtcaaggacaagagc
ccaccatcagggagtgactttgaggggtcagacgatgctgcaggcaagaaaaagaagaag
aaggaaaagaaaaagcacaaaaaacacaagaagcataaaaaacacaagcacaagaaaaac
aaggacggtgaaattgaagatgagggatcggacagtgaggatgacactgctgagctagag
gagagaaagctgagggagagagctctacagtctatgcagaaggccaaggcatctgaattc
tccaactga
DBGET
integrated database retrieval system
