Mizuhopecten yessoensis (Yesso scallop): 110458016
Help
Entry
110458016 CDS
T05079
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like isoform X1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4590
PLAT
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
110458016
NCBI-ProteinID:
XP_021365220
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MSHVHEGPLATYNSLTDRNLAGYFSNIRMRRHLRKSGLISGRGRIVSENQYRLNMARKEH
KRHVKDLLSQAIVHKTLDLERTRQVEIKRKLEEIGKIELVRRVRAANKKSESADLLPLLT
PKMRKRPTPSVVEEVVNEFQNALTCPPKHVVIYVDENGRPLTPTSEMGEESHSPSRSKGR
QEEIDTRHLYALDSNSLKKYALTLSKIEQGEGLMSPYGMNQIPTPPRSARSGKGNNSARA
RGSRPRTADARMSSQRDTPEKRSPTMRNTDEESRPSSQLSVVEGALMLHRQEPAVMHQGE
VQTLCEITMKYHGPNLTLPRDQYEPKQEVAIDQQHCGGNTLTVFKERLKAGDKFTFISRR
HRGFPFSLSVYVDGRMDFRISRCCEYKHFKGVRLGGKLGHFSLLGVEGATPCYRCALNTQ
ATPRSLKRPVPVKQKNNKAEEIREEIIVPKPIQKRKDEKTEESEGYDDDFEEDEDDKKKT
NGKYEEDRFESSSSSSSSEDEAPPAKTKSTTITGYEDEVEDEPPVRKSKSKTGLDHTRKI
EAFSSDNEDEDENTSATETFVITTSTADKPSAGTDANVFIVLIGTNNKSTGKIWLKKGKF
HRGRSDIFTEKVPDIESPVKDIEIGHDCSGGPKQTWNLQEVHVYCPRTGIKQTFPVYKLL
TPENPSVTVSEQRSVRKNVKEDDYPMRRSSTSSSSSSSSSSSESGRKAKKEVALSVSVDT
RTEMTESTERPPSSASSHSIDVDSPRPETPSRRSPSPRRRSPSPPSPRRRSPSPPSPRRR
SRSPSSSRSRSPSPRRRSPSPPSTRPKSPERSPTPPRREESPSPVLSTVVKDEPVKAQLI
IERSSSTTSFSSETETESEMPQKEDRKFIGKKEKEVEPIPVPAVFSYETPFQHSESKQLE
VRQGIQETPRSATSGSSSDSSSDSSDSETETETTRSQPPPVVAAKVKTEAPVVVQATPAV
ERAPKVEPKSSESETETQTETETETESGKPGGKPSIVPILSLSPKPAVKDTPRSTTSDSS
SDSDTETQTETDTDTKRSVPQPPKPPSPIVATPVSQEKRKSDSSSSSSSGSGSETETQTE
TDTEKQGRKQPSPPPQPRKSPPPVAEVKTEKVKSSTESSSSSSGSDTETQTETDTDRKAR
VPSPPPAPVTVTAEKKEAPKKSSDDTFVITVVTSDKPSAETDANVFIVINGTNNISSDKF
WLRNGNFGRGQRHKFSKKLYGIDSPVKDIEIGHDCSGQKPTWHLQEVQVYCARTGLQQIF
PVYRLLSSDKPSLVVSEQRSVQKFIQSENDSDSDSGSDGDSDSSSDSESELTEDDKKKLK
QEPVKQDLPPKASFPLTDSDAPHVVSESDGNKFNVFGSGTDTDNMHGGNDPDSVTAAGPI
KSAYLLKIGVKPGQPLEGSILPKVAGETDIELSAIALTTEQVKELGTYIEKSKNIKSVCL
RNCGIDDDKFDKIVDSIESTESDIKMLNLNLNKLGDSAAADIADMLGEKSSVEILLIHGN
PLGDKGVKNLVMGILDIGDSDDDDKGEVNLRELDLGDTNMGDSGMSRVAIFLEKNTTLKT
LNLNGNKAVTVEGWQRLGKALKKNKTLHTLSLDFNNIGDEGIAAVVEGLRTNVTLQTLEL
EDVGITKKGGKMLRDLVKDNPTILEVTIFPGNDIPDDIRDDIKTFLGLSNEAHKKRQQMA
S
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgttcacgaaggcccgttggccacctacaacagtctgacagacagaaacttg
gcagggtacttctccaatatccgcatgcggcgccacctacggaagtctggactgataagt
ggacgaggaagaatcgtctccgagaatcagtataggctcaacatggcacgcaaggaacac
aaaagacatgtcaaggaccttctgtcacaagccatcgtacacaagactcttgaccttgag
cgcacacgacaggttgagatcaaacgcaagctggaggagattggcaagattgaactggtt
cgcagagtgagagccgccaataagaaatctgaaagtgctgaccttttacctctcttgacc
ccaaaaatgagaaagaggccgacaccatctgtcgtagaagaggtggttaatgaatttcag
aacgcacttacttgtccaccgaagcatgtggtgatatatgtggatgagaatggacgacct
ttaaccccaacctcagaaatgggagaggaaagccactccccttcccgttcaaagggacga
caggaagaaatagataccagacacttgtatgcgcttgactccaattctcttaagaagtat
gccctgacattatctaagatagaacaaggggagggattaatgtctccctacggtatgaac
caaataccaacccctccccgcagtgcacgcagtggcaagggaaataactctgcccgggcc
cgtggttcaaggccaaggacagctgatgccaggatgtcatcacagagggacacaccagaa
aaacgatctccgaccatgagaaacacagatgaagaatcacgcccatcatcacaattatct
gtagtggaaggggcattgatgcttcatcgccaggaaccagcagtgatgcatcaaggggaa
gtacagacactatgtgagatcacaatgaaataccacggaccaaaccttactctgccacgg
gaccagtatgaacccaaacaggaagtcgccatcgaccagcagcattgtgggggaaataca
ctgactgttttcaaagagaggctaaaggcaggagacaagtttacgtttatatcccgacgt
caccgtggtttcccattcagtctgtcggtatacgttgatggccgtatggacttccggatc
agccgctgctgtgaatacaaacacttcaagggagtccgactcggaggcaagcttggacac
ttcagtctactgggtgtagagggagccactccctgttacaggtgtgctctgaacacccag
gccacgcccagaagtctcaaacgccccgtccccgtcaaacagaagaacaacaaagccgag
gagatcagggaggaaatcatcgtaccgaaaccaatacagaaacgaaaggatgagaaaact
gaagaatcggaaggatacgatgatgactttgaagaggatgaggatgacaagaaaaaaact
aatggaaagtatgaggaagaccgttttgagtcctcatcatcatcatcttcatctgaagat
gaagctccacctgcaaagacgaaatcaacaacgatcacaggatatgaagatgaagtagaa
gatgagccccctgtcagaaaatctaaatccaaaacgggcctggatcacacacgaaagatt
gaggcattttcgtctgataatgaagatgaagatgaaaacaccagtgcaactgagacattt
gtcatcacaaccagcacagctgataaaccctcggctggaactgatgccaacgtcttcatc
gttcttatcgggacaaataacaaatccaccggaaaaatctggctgaagaagggaaagttc
cacagaggaaggtcggacatatttacagagaaggttccggacattgagagtcccgtgaaa
gatattgagatcggccatgattgtagtgggggtccaaaacaaacgtggaatttacaggaa
gttcatgtgtactgccccagaaccggaataaagcaaacatttcccgtctataaactcctc
acaccggaaaatccaagtgtcactgtgtctgagcagagatctgtaaggaagaacgtgaaa
gaggatgattaccccatgcgtcggagcagtacaagcagtagcagcagttcctcatcctct
tcatcagaatctggtcgtaaggcaaagaaagaagttgccctgtctgtttccgtggatact
aggactgagatgacagagtcgacagagaggccaccgtcctcagcttcgtcccactcgatt
gatgtggactccccacgacctgaaacaccatctaggagatcaccttcaccaaggcgacga
tcaccttcccctccttctcctaggagacgatcaccctctcctccgtcaccaaggagacga
tcccgctccccttcttcatctagaagcagatcaccttcaccaagaagaagatcaccctcc
cctccatcaacacgtcccaaatcacccgagcgatccccaacgccacctcgtcgtgaggag
tcgccctcacctgtactatctactgtagtaaaagatgagcctgttaaagcacagctaatt
attgagaggagtagcagcacaacctcattctcctctgaaactgagacggaatcagaaatg
ccgcagaaagaggataggaaatttataggcaagaaggaaaaggaagtggagccaattccc
gtccctgctgtgttctcctatgaaaccccgttccaacacagcgagagcaaacaactagag
gtacgtcagggtatccaagagacacctcggtcagcaaccagtgggtcgagttcagactct
agcagtgactcaagtgacagtgagaccgagactgaaacaacaagatcccaacctccacct
gtcgttgcagcaaaggtcaagacggaggcacctgttgttgttcaggcaactccagctgta
gagagagcaccgaaagttgaaccaaagtcgtcagaaagtgaaacagaaactcagactgag
actgagacagagacagagagtggcaagcctggtggtaaacctagcattgtccctatccta
tctctgtcccccaaaccagcggtcaaggacactccaaggtcaaccaccagtgattcttcg
tctgacagcgatacagagacccagaccgagactgacacagacaccaaacgtagtgtacca
cagcccccgaaacctccgtcaccaatcgtggcaacaccagtctcgcaagaaaagaggaaa
tctgattccagcagtagcagtagttcaggatcaggttctgaaacagaaacacaaactgag
actgatacagagaaacagggtagaaaacagccgagtccccctccacagccccgtaaaagc
ccacctcctgttgctgaggtaaaaactgaaaaagtaaagtcctcaacagaatccagcagt
agctcgtcaggcagtgataccgaaacacaaacggagaccgatacagacaggaaagcaaga
gtgccgtcaccccctccagctccggtaactgttactgctgagaaaaaggaggcaccgaag
aaaagctcagatgacacctttgttattaccgtggtaacctcagacaaaccctcggctgag
actgacgctaacgtctttatcgtaataaacggcacaaataacatttcaagtgacaaattt
tggttaagaaatgggaactttggacgtggtcagagacacaaattttctaaaaagctttat
ggaattgacagtcctgtaaaggacattgagatcggacatgactgtagcggacagaaaccg
acatggcacctacaggaagttcaggtgtactgtgccaggactggcctacaacagatcttc
cccgtgtataggttgttgtcctcagacaagcccagcctggtcgttagtgaacagcgatct
gtccagaaatttatccagagtgaaaatgattctgacagtgattcgggaagtgacggtgac
agtgactctagcagtgacagtgagtctgaactgacagaggatgacaagaaaaaattaaaa
caagagcccgtaaagcaagaccttcctccaaaagccagctttcctctaacagacagtgat
gccccccatgttgtcagcgagagcgatggcaacaagtttaacgtgtttggcagtgggacc
gacacagacaacatgcatggtggtaatgatcctgatagtgtgacagccgcaggaccaatc
aaatctgcatacctgttgaaaatcggtgtaaaaccgggacagccactagagggcagcata
ctgcctaaagttgccggggaaacagacatagaactaagtgctatagccctgacaaccgaa
caggtgaaggaactgggtacctacattgagaaatcaaaaaacatcaagtccgtttgtctg
aggaattgtgggattgatgatgacaagtttgacaagatagtagacagtattgaaagtaca
gaatcggacattaagatgctgaacttgaacctgaacaagctgggagactctgctgctgct
gatatagcggacatgttgggcgagaaatcctctgtagagatattacttatccatggtaac
ccactaggcgacaagggagtgaagaatttagttatgggcatcctcgacataggcgatagt
gatgacgatgacaaaggcgaggtcaatctacgagagctggaccttggcgacaccaacatg
ggggacagtggcatgagtagggtcgcaatcttcctggaaaagaacaccactctgaaaaca
ctgaatctcaatggcaacaaagctgtcactgtggagggatggcagagacttggaaaggct
ctcaagaaaaataaaaccctacatacactgtcattagatttcaacaatattggtgatgaa
ggaattgctgctgttgtcgaggggctccggacaaatgtcactctgcagacactggagctc
gaggatgttggaatcaccaaaaagggcgggaaaatgttgagagaccttgtaaaagataat
ccaactattttagaggtcaccatttttccaggaaatgatattcctgacgatatccgtgat
gatattaaaacattccttggtttgagtaacgaggctcacaaaaagaggcagcagatggcc
tcatag
DBGET
integrated database retrieval system
