Mizuhopecten yessoensis (Yesso scallop): 110463070
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Entry
110463070 CDS
T05079
Name
(RefSeq) lysine-specific demethylase 2A-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110463070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myi03000
]
110463070
04121 Ubiquitin system [BR:
myi04121
]
110463070
03036 Chromosome and associated proteins [BR:
myi03036
]
110463070
Enzymes [BR:
myi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
110463070
Transcription factors [BR:
myi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110463070
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
110463070
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110463070
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110463070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
Cupin_8
F-box
JHD
LRR_4
Cupin_1
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
110463070
NCBI-ProteinID:
XP_021373085
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MADSNEAGRKLRAKERKTYTDEDLDDDDIEGKRAFNLEDKLQSKKYNKNFVKVMKGHELN
MGYLQANGLETPIVMYDKTGLGMRVPSQNFRVNDVKQCVGSRRVLDVMDVTTQKGKEMTM
REWVQYFENPERERLLNVISLEFSHTKLENYVESPTLVRQVDWVDTVWPQYLKECQTEST
NIIDKMKYPKVQKYCLMSVKGCFTDFHIDFGGTSVWYHILHGQKVFWLIPPTEKNIDSYI
TWTLSGKQGDFFLADHVEGCERIELNEGYTFIIPSGWIHAVYTPKDSLVFGGNFLHSYNI
VNQLRVSEVEDKTHVRQKFRYPFYAEIAWYVLAQYIKCVSGKEFLNLRKLPEEKEADDIT
METFSNDDDSRPPSRCSQENGGIDIKPVDLKDVIAPGTPKMAKSVTIELTRIDQSPIKRS
PSDDECSTPGRRRSPRKSSSDSCSSADTEIYERPDEMVVDNVNDVEAEKDKKVDKPVFSG
VSKMEVASADVSEVTSTSGSKSQKWIHLTKWELQGLRTLVEWLEGLAPTKKGVPKELLEP
ESLLEEAKQLLMDHAGDNPALAVTGDPVLFWPPSKKKMKPKMKLSGPKKSAGKGSPSSGV
RRRRTRCKKCEPCTRNDCGECNFCKDMKKYGGPGRMKQSCISRQCLAPVIPHAAVCMICG
KDDRIKESEGSDETTTTLMECGICWEIVHPPCIRQKYENLDNNGKVNEDLPNSWECPKCC
HDGKQGQLKPRIFKGVGKTGKGGEASLSCDSPGMDINHMIKTEDEDSSEGKRVTSRQTLS
PLADYIDHKHEDMQMTKDTMETEEEEVTPEGDHFEDVKRKKTMKNSVSQGNLKKGRGPLK
KVKLRRLSGQQISQRRPLHSIMTKRKSPVQLKPTGKLKSPGQLKLKKSPIKRKRDQLIDS
LSPREQLVGNPVITRSGRTVKKSPQLTDENMSSDMPRKRARREGLSTPTGSPKHAPKTRH
SSQSPGGSGGKLRQRPHNSSPGGTGVQDTPEGVGRPKKSPRKLLMAAGGNAPSQKETVSS
TRQNIGVGPTVKRKKLSVKAAAGVSGSGSLGQHSKNVTVGQTGRSSAQPGKGGAALLPGK
SGAAFDPTQFNLKEPKLVLERYVVRPAPPSPPPDHLELNTGRKHVLKRMMWLKIFSYLSG
PDLVRCMAVNKMWYRWCLHHTLWKYIDISNTRILQTHLIGIVKRQPYSLQLNSVTMTQMQ
LSWLLARIPQLKDVSLASCSWTTVSALCLTCPLLSSLNLNWVAGLTEDGFQDIITPPTER
IPGMHDVSRLHCLKVLSLAGTGITDSSLALMAEHLTRMENLDLSYCTKLSNAGMEVLLSP
HWSIHKTIRKIDISGCRRITESVLDLLTACNKLRLVVARNCTGISKHHFVKASSSSNITY
IT
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcaacgaagctggaagaaaattgagagccaaggagaggaagacgtacacg
gacgaggacctcgatgatgatgacatcgagggtaagagggccttcaacttggaggataaa
ctccagtccaagaaatacaacaaaaactttgtcaaggtcatgaaaggtcatgaattgaac
atgggttacctgcaggctaatggactggagacaccaatagtgatgtatgataagacagga
ctgggaatgagagttcctagtcagaacttccgggtcaatgatgtcaaacagtgtgtgggc
agtaggcgtgtgctcgatgtgatggatgtaacaacacagaagggaaaggagatgacgatg
cgcgagtgggtccagtattttgaaaacccagaacgagaacggctcctgaatgttattagt
ctggaatttagccacacaaaattagagaactatgtcgagtctccaacactggtacgacag
gtagactgggtggacactgtatggccacagtacctgaaggaatgtcagaccgagtccacc
aacatcatagacaagatgaagtatccaaaagtacagaagtactgcctgatgagtgtgaag
ggctgttttacggacttccacattgactttggtggtacctcagtgtggtatcacatccta
cacggccagaaggtgttctggctgataccccccacagagaagaacattgacagctatatt
acctggacgttgtcagggaaacagggggacttctttttggctgatcatgtagaaggctgt
gagagaatagaactcaacgagggctacacctttatcataccatcaggttggattcatgct
gtatacacacctaaagactctctagtgtttggaggtaattttctccatagctacaacatc
gtgaaccagctgagggtgtctgaggtggaggataagacccatgtgcgacagaagttccgc
taccctttctacgctgagatagcctggtacgttctagcccagtatatcaagtgtgtctct
ggaaaggaatttctgaacctacggaaacttcccgaggagaaagaggctgatgacatcacc
atggaaaccttctctaatgatgacgattcacgtccaccgtcgaggtgttctcaggaaaat
gggggtatcgatatcaaacctgtggacctgaaggatgtcatagcgccaggcactcctaaa
atggccaagagtgttaccatagaattgacacgaattgaccaatcaccaattaaacgctca
ccgagtgacgacgagtgtagcacacctggtcgacgacgatcaccgaggaaatcttcttct
gacagctgtagttctgcagatacagaaatatacgaaagacctgatgaaatggttgtggat
aatgttaatgatgttgaagctgagaaggacaagaaggtagacaaacctgtttttagtggt
gtgagtaagatggaggtggccagtgctgatgtgagtgaagttacaagtacaagtggctcc
aagtcacagaagtggatacatctcaccaagtgggagctacagggactgcggacattggtg
gaatggctggaaggattagcaccaaccaaaaagggtgttcctaaggagctattggagccg
gaatctctgcttgaagaagctaagcaacttctgatggaccatgctggagacaacccagct
ctggctgttacgggtgatcctgtactgttctggcctccctctaaaaagaaaatgaaacca
aagatgaagctgtctggtccaaagaagtcagcagggaagggcagtccatcatctggtgtc
cgtcggcgcagaacacggtgtaagaagtgtgagccgtgcaccaggaacgactgtggggag
tgtaacttctgtaaggacatgaagaagtatggaggaccaggcaggatgaaacagtcgtgt
ataagcaggcagtgtctggcacctgtgataccacatgcggctgtatgtatgatctgtggg
aaagatgaccgtataaaggagtcggagggttcagatgagacgaccacgacgctaatggag
tgtggaatatgttgggagattgttcaccctccttgtatcagacagaagtacgagaacctg
gacaacaatggcaaggtgaatgaggacctgcctaacagctgggagtgccccaagtgttgt
cacgacggcaagcaaggacagctcaagccaagaattttcaaaggtgtggggaagacaggt
aagggaggggaagcatcattgtcatgtgactcgcctgggatggacatcaaccacatgata
aagacagaggatgaggattcgtctgagggcaagagggtaacatctcgtcagaccctgtct
cctctggctgactacatagatcataagcatgaagacatgcagatgacaaaagacacaatg
gaaacagaagaagaagaggtcacaccagagggagatcatttcgaggatgtgaagagaaaa
aagacaatgaaaaattctgtatctcagggaaatttgaaaaagggccgtggtcctttaaag
aaagtgaaactgagacgattgtcaggtcaacaaatctcacaacgacgacctcttcactcc
attatgacgaagcggaaatctcctgtacagcttaaacctactggtaaacttaaatctcct
ggtcagctcaagctgaaaaaatctccaatcaaaaggaagcgagaccagttgattgacagc
ctaagcccccgggaacagttagtaggaaatcctgtgataactcgctcaggcaggacagtg
aagaagtctccccagctcacagacgaaaacatgtcgtcagacatgcccaggaaacgtgcc
cgacgtgagggtctgtctacacctaccggatcgccaaaacatgccccaaagacgaggcac
tcaagtcagtcgcctggtggtagtggtggaaagctccgccaaagacctcacaatagctct
cccggggggacgggggttcaagacacccccgagggcgttgggcgtccgaaaaagtcgccc
agaaagttgttaatggccgcaggaggtaacgcgcccagtcagaaagaaactgtgtcctcg
actcggcaaaacattggagtaggaccgaccgtgaaacggaagaagttatcagtaaaggct
gcagcgggggtttcaggctccggatcattgggacagcattccaaaaatgtcacggtcggt
cagacgggcagaagttcagctcaaccaggcaaaggaggtgctgcacttctgcctggaaaa
agtggtgctgcatttgatcctacacagttcaatctgaaggagcctaaacttgtgttagag
cggtacgtggtcagaccagcaccaccctctcctccgccagatcatttggaactaaatacc
ggacgcaaacacgtcttaaaaaggatgatgtggctgaagatattttcttatctgtctggt
cccgaccttgttcggtgcatggccgtcaataagatgtggtaccgttggtgcctacaccac
acactttggaaatacatagacatcagcaatacgcgtattttgcagactcatctcatcggc
atcgttaagaggcagccttattcacttcagctcaattctgttacaatgacacagatgcaa
ttgtcatggttactcgcgcgcattccacaactaaaggatgtgtcactagcgtcatgttcc
tggaccaccgtcagtgccctctgtctgacctgtcccctactatcgtcactcaatctgaac
tgggtggcgggcctgaccgaggatgggttccaggacattattacccctcccacggaacga
atacccggcatgcatgacgtcagtcgtctgcactgcctcaaagtgctgagtttggccggc
acgggaattacagattcatcactagccttgatggcggaacatttgacgaggatggagaac
ctagatctcagttactgtaccaaactctctaacgcaggtatggaggtgcttctgtcgcca
cattggtcaattcacaagacaatcagaaagatcgacatctccggttgtcgacggataaca
gagtccgtccttgaccttttgaccgcgtgcaacaagctacgactagtcgtagccagaaac
tgtacaggtatctcaaaacaccactttgtaaaagcgtcgtcttcatccaacatcacttac
atcacgtga
DBGET
integrated database retrieval system
