Mizuhopecten yessoensis (Yesso scallop): 110466783
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Entry
110466783 CDS
T05079
Name
(RefSeq) TAR DNA-binding protein 43-like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110466783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110466783
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110466783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP43_N
RRM_1
Nup35_RRM_2
PCSK9_C2
Motif
Other DBs
NCBI-GeneID:
110466783
NCBI-ProteinID:
XP_021379214
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MTDAIVSFPCRRDSFEDFSPVKMEDTVNMSDYISVSENESDEAVEIPREEDGTLLLSTLS
AQYPGACGLKFRNPATGNFRGVRLIDGKLHPPDSAWGNDTYIVVFPRPNSSQSEIQETEN
QIHHIQSLGDNKRKGDDMENPVIKTKRVETRNVCSDLIVLGLPWKATEEDVKAYFTDNIG
EVVLAQVKRDAKGNSKGFGFIRFSSYKDQLKCLQQRHMIMGRWCDVNIPNSNVSASETAQ
RAMNSKIFVARCSEKITVDDLRTYFAKFGEVTDVFIPRPFRSFAFVTFQDALVAQSLCGE
DHIICGCSVHLSSAAPKTNSKMGGDRQGGFRGNDFGRGGGMGMGMGMPQGGGGGGGGQGQ
GWGGQRGNRPQGNPGGGDGNDNMGMNFLNMMAAAQAVLSGQGGWGPLGMGGQNNSNAEPS
MGQPFNQSSPRPDSGNNQRSFSGWGGGSSGGGSGSGGTPFEGGNNNSGGSGSTGSGSGNS
GGYSSNWSGQNRWN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccattgtttcctttccgtgtagacgcgactcttttgaggatttttcacct
gtaaaaatggaagacactgtaaatatgagtgattacatcagcgtatctgaaaatgaaagc
gacgaagcagtagagataccaagagaggaagacggaacactgcttctatcgacactttca
gctcaatacccaggagcatgcggtctcaaattcaggaacccagccacaggcaatttccgg
ggggttcgtctgattgatggaaagcttcaccctccagactcagcatggggaaacgacacg
tacattgttgtcttcccgagaccaaattcgtcacagtcagaaatccaagaaacggaaaac
caaattcatcatatccaaagtttaggtgacaacaaaaggaagggagatgacatggagaat
cctgttataaagacaaagcgagttgagaccagaaacgtctgcagtgacctgattgtcctt
ggcctgccttggaaagcaacagaagaggatgttaaagcttacttcacagacaatatcggc
gaagttgtcctagcacaggtaaaacgtgatgccaaagggaattccaaaggttttggcttc
atccgcttcagctcatacaaggaccagctgaaatgtttacagcaacgccacatgatcatg
ggtcgatggtgcgacgtcaacattcctaactccaacgtcagtgccagtgaaactgcacag
agagctatgaatagtaaaatatttgttgctcgatgctcagaaaagattacagtggacgac
ttgaggacatattttgcaaaatttggtgaagtgaccgatgtattcatcccacgacccttc
cgatcatttgccttcgtgacatttcaggatgcattggtggctcagagtctctgcggagag
gaccacataatctgtggatgtagtgtccacttgagcagtgctgcaccaaaaaccaacagc
aagatgggtggggaccgtcagggagggttccggggcaatgactttgggcgaggtggtgga
atgggtatgggaatggggatgcctcagggaggtggaggaggaggaggaggacaagggcaa
gggtggggtggtcagagaggcaaccgaccccaaggaaaccctggaggtggagacggaaac
gacaacatgggcatgaatttcctgaatatgatggcagctgcacaggctgtgcttagtgga
caagggggctggggaccactggggatgggaggacagaacaatagcaatgcagaaccatca
atggggcagccttttaaccagagttcaccacgtcctgacagtggaaataaccagaggtca
ttcagtggctggggtggggggtcctcgggaggaggatcagggtcgggggggacaccgttt
gaaggtggtaataacaacagtggcggcagtggttcaaccggtagtggcagtggaaacagt
gggggctacagcagtaactggagtggacagaacaggtggaactaa
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