Myxococcus sp. MxC21-1: QEG98_30955 Help Entry QEG98_30955       CDS       T09754                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism myx  Myxococcus sp. MxC21-1 Pathway myx03030   DNA replication myx03410   Base excision repair myx03420   Nucleotide excision repair myx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:myx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     QEG98_30955 (ligA)    03410 Base excision repair     QEG98_30955 (ligA)    03420 Nucleotide excision repair     QEG98_30955 (ligA)    03430 Mismatch repair     QEG98_30955 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:myx03032]     QEG98_30955 (ligA)    03400 DNA repair and recombination proteins [BR:myx03400]     QEG98_30955 (ligA) Enzymes [BR:myx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      QEG98_30955 (ligA) DNA replication proteins [BR:myx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      QEG98_30955 (ligA) DNA repair and recombination proteins [BR:myx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      QEG98_30955 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      QEG98_30955 (ligA)    MMR (mismatch excision repair)     DNA ligase      QEG98_30955 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       QEG98_30955 (ligA) BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH RNA_pol_A_CTD BRCT_2 Motif Other DBs NCBI-ProteinID:  WNZ60376 UniProt:  A0AA96XFS8 LinkDB All DBs Position 6872096..6874114 Genome browser AA seq 672 aa AA seqDB search MDDFQKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDS PTQRVGGAAAEEFGEVVHRAPMLSLANIFEDQGLIEFDERIRKLVGLPGIAYVCEPKLDG LAIALRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDGVKVPDVLEVRGEVF IRKKDFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPV FKTHIEKLEYLKTLGLPINQYRRAEGLEGVREAYDASLKGRHELPFEVDGMVVKVDDEDQ RKRLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARA TLHNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVLSKRPADSAPFEFPKHCPVCDAVAT KDEDGAIIRCTGASCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYAL TKEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEM LFEASLEDISRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAPQVATGGPFVGK SVVLTGAMTGMTREQAKEEVERRGGKVAGSVSRKTDFVVAGEDAGSKLKKAQELGVRILD EQAFLQMLQTNA NT seq 2019 nt NT seq  +upstreamnt  +downstreamnt gtggacgacttccagaaagccgcagcccgagcccgtgagctccaccgtgagctggcgcac cacaactaccgttactacgtcctcgactcgcccgaggtcagcgacgcgcaatacgacaag ctgatgcgcgagctgcaggacctggaggcgaagcacccgagcctccagacgccggattcg cccacccagcgcgtgggcggcgcggccgccgaggagtttggcgaggtggtgcaccgggcg cccatgctctcgctggccaacatcttcgaggaccagggcctcattgagttcgacgagcgc atccgcaagctggtgggcctgccgggcatcgcctacgtctgcgagcccaagctggacggg ctcgccatcgcgttgcgttacgaaaagggcgcgttcgtccagggcgccacccggggcgac ggcaccaccggcgaggacgtcacctcgaacctgcgcaccatccgcagcctgcccatgtcg ctgttcccccaggacggcgtgaaggtgccggacgtgctggaggtccgcggggaggtcttc atccgcaagaaggacttccagaagctcaacgagaagcgcgaggaggaaggcgagccgctc ttcgccaacccgcgcaacgccgccgcgggaagcctgcgccagttggacccgcggatgacg gccgcccggcccctttccgtgttcctctacgaatgcgtcccgggcgaaggcgtgcccgtc ttcaagacgcacatcgagaagctggagtacctcaagacgctgggcctgcccatcaaccag taccgccgcgccgagggcctggagggcgtgcgcgaggcttatgacgcctccctcaagggc cgccacgagttgcccttcgaggtggacggcatggtggtgaaggtggatgacgaggaccag cgcaagcgcctgggccaagtctccaagagcccccgctgggcggtggcgtacaagttccct ccggaggaggagtccacggaggtgatggacatcggcatccaggtgggccgcacgggcgcg ctgacgccggtggcgcacctcaagccggtgaaggtgggcggcgtcacggtggcgcgcgcc acgctgcacaacgaggacgagctgcgccgcaaggacgtgcgcaagggcgacaccgtcttc gtgcgccgcgccggtgacgtgattccggaaatcgtctccgtggtgctgtccaagcgcccc gcggactccgcgcccttcgagttccccaagcactgccccgtctgcgatgcggtggcgacc aaggacgaggacggcgccatcatccgctgtacgggcgcctcctgccccgcacagctggtg gagaagatccgccacttcgccagccgcctggccatggacatcgaagggctgggcgacaag ctggccgcgcagctggtgtccaccggcagggtgaaggcgttcgcggacctctacgcgctc accaaggaggacctgctgacgctggagcgcatgggcgacaagagcgcggacaacctcatc gcgtcgctggagcgctccaagcagaccacgcagcgccgcttcctctattccctgggcatc cgccacgtgggcgacgccaccgccaaggcgctggcggaggccttcccccggtcggagatg ctcttcgaggccagcctggaggacatctcccgcgtgaaggacgtgggccccatcatggcc caggtcatccacaccttcttccaggagccccagaatcaggaggccatccgcgcgctcctg gcggcgggggtccagcccgcggcgccccaggtcgccacgggaggccccttcgtgggcaag tcggtggtgctcaccggcgcgatgacgggtatgacgcgggagcaggccaaggaagaggtc gagcgccggggcggcaaggtcgccggaagtgtctcgcgcaagaccgatttcgtcgtggcc ggtgaggatgcgggcagcaagctgaagaaggcccaggaactcggggtaagaatcctggac gagcaggcgttcctgcagatgttgcagacgaacgcctag

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