Maylandia zebra (zebra mbuna): 101466016 Help Entry 101466016         CDS       T02814                                  Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mze  Maylandia zebra (zebra mbuna) Pathway mze04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mze00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101466016  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mze00536]     101466016 Glycosaminoglycan binding proteins [BR:mze00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101466016 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  101466016 NCBI-ProteinID:  XP_004569063 LinkDB All DBs Position LG6:complement(1994664..2041514) Genome browser AA seq 1744 aa AA seqDB search MMDRWSQVRLTWLLLLLVASLHTSGAVAPVDVLKVLEVSEDMEGVSLEAGLCISREGREE PDLSFKINKKIQLSAPTMQFFPDSPFPVNFSVVTTVRALKSSQVFLLSLYDSQGTQQLGI EIGRSPVFLYEDHEGQPPPDLYPTFRKVNLADGNWHRIAYSVDGQSVTLYLDCEKLNTLD LLRGHDPHVSTEGVTVFGTRLLDEDVFEGDIQQLLIIDDPRAAETYCQDYIPDCDKPLPY NSILTKAEEVERPPKKHVVEEYEEFDFSDLYDDSYVSTVTASPNVTEYEIIEYEDYDNTT NYHHVNEYEYEEEYDDRYGPAEREREFSINGQDIPEKGQKGEPGYLGAGTQITGPYGPPG PEGEPGPPGVTGPVGPRGDAGEPGPPGRPGLNGVDGIPGPPGNIMLIPFHSGGDPKTGSV VSAQEAQAQAILQQTKLAMKGPPGPLGLRGRPGPLGVPGPSGLKGATGEMGPPGPPGQPG ISGQNGRLGKRGRAGADGGRGEIGETGAKGDRGFDGLPGLPGDKGHNGDRGKPGPVGPPG ELGEKGSQGPLGPRGQPGDAGPRGMTGPRGRPGPPGMQGIRGIDGAQGSKGNIGPPGEVG APGQQGNPGIIGFPGPQGLVGLPGEKGPQGKKGMRGLPGNDGPPGHPGREGTPGEKGLPG PPGVQGPVGYPGQRGVKGADGLRGLKGSKGEKGEDGFPGAKGEMGAKGDVGDNGAPGSRG EDGPEGPKGQLGPQGEAGLIGIPGEKGKLGVPGLPGFPGRQGPKGSDGFPGSVGALGEKG KKGPAGQPGSAGQRGPNGARGARGARGPTGKSGEKGASGHDGPPGPSGERGPQGLQGRNG EPGPKGAVGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGKSGEPGPPGDRGHPG APGVPGEHGLPGTAGKEGGKGDPGLHGTSGKNGPPGMKGFRGSRGAPGIMGPPGLKGGSG PRGSPGAIGPTGERGPPGPAGAIGQPGRAGAIGGPGPMGEKGEPGEKGPIGPAGQDGDQG PVGMLGAMGTAGPAGEDGDKGEQGKPGQKGSKGDKGEGGPPGPTGPQGPIGQPGLPGLDG LPGPRGQQGMYGPKGDEGPRGFKGSTGPIGLQGMPGLPGEKGESGHVGLMGPPGQQGPSG SQGPIGGQGPPGRPGMIGQPGVVGEKGEDGEAGDPGAVGVSGKPGAKGEQGEKGDTGPPG MSGPPGARGTPGEDGAKGNAGPIGLTGDLGQQGEAGPNGVDGLSGSKGDTGDPGNLGPPG APGEPGPPGPPGRRGHMGKPGKEGKAGLKGAKGALGLEGPIGKTGPVGAQGHPGKPGPQG LRGIPGPAGEQGLNGPPGQTGPPGPMGPPGITGLKGDPGKKGDKGHGGVIGLIGPPGDIG EKGDRGLPGNQGLLGPKGDEGPVGSSGPHGPPGPTGLSGVIGQKGSKGNQGPIGPRGDTG PAGPPGLPGLPAAGVVPLPQRGRRRRNHSWVDGTALEDEEDGEEEAIGGGEEEMMQGDQA EQDSQLNEKKGQGMEEVFASLSSMKVEVEGLRTPQGTYHSPARTCKELWLLHPDLPNGEY WIDPNQGCHRDSFKVFCNFTAQGETCLYPDKKFQSVKLASWKEEKPGRWYSQFRKGKKFS YSGSDGVSVHIVQMTFLKLLSATAKQIFTYHCLNSAAWLHTATYNHEYALRFRSSDGEEL TYENTHYITALYDGCRTRSGQERTVLEFDSPLSNTLPIIDVAVSDFGNKNQKFGFEVGPV CFNG NT seq 5235 nt NT seq  +upstreamnt  +downstreamnt atgatggatcgatggagccaagtgcgcctgacgtggctgctgttgctgctcgtcgcctcg ctgcacacctcaggagcagtcgctcctgtcgatgtcctgaaggtcctggaggtatcggag gacatggagggcgtgtcgttagaggcagggctgtgcatcagcagagaggggagagaggag ccagacctctcctttaaaatcaataagaagattcagctgagtgctcccaccatgcaattt ttccctgattctccattccctgtgaatttctcagtggtgacaacagttagagctctgaaa agctcacaggtctttctcctttccctgtatgactcacagggcacacagcagctgggcata gagatcggccgttctcctgtattcctgtatgaggaccatgagggccaaccccctccagac ctttaccccacttttaggaaggtcaacctggctgatggcaattggcacagaatagcctac agtgtggatgggcagtcagtgactctctacctggactgtgagaagctgaacacccttgac ctgctcagaggtcacgacccccacgtcagcactgagggtgttaccgtgtttggaacacgg ctgctggatgaagatgtgtttgagggagacatccagcagctactgatcatcgacgacccc agagcagcggagacgtactgtcaggactacatcccagactgtgacaaacctttaccctac aacagcatattaacaaaggccgaagaggtggagagaccgccaaagaaacacgtggtcgaa gagtacgaagagtttgacttcagcgacctctatgatgactcctatgtttccacggtgact gccagtccaaacgtcacagagtacgagatcatagagtacgaagactacgacaacacgaca aactaccaccacgtgaacgagtatgagtatgaggaagaatatgatgaccgctatggacct gcggagagagagcgggaattctccattaacggacaggatataccagagaaaggacagaaa ggagagccagggtatttgggagcgggaacacaaatcacaggaccctatggacctccaggg cccgagggagagccggggccacctggagtcacgggaccggtgggacctcgaggagacgct ggagagccgggtcctccggggcggccaggccttaatggtgttgatgggataccaggtccc ccaggaaacatcatgcttataccgttccactcaggtggcgatccaaagacaggttctgtg gtttctgcacaagaagcacaagctcaggccatcctgcagcagaccaagctggctatgaag ggacctccagggccactcggcctcaggggaagacctgggccactgggtgtaccaggcccc tctgggctgaagggagccactggtgagatgggaccaccaggccctccaggacagccaggt atctccggtcagaatgggcgacttgggaaacggggtcgagcaggtgcagacgggggtcgt ggtgaaataggggagactggagcaaagggagacaggggatttgatggcttgcctggtctc cctggagacaaagggcataacggcgacagagggaagccaggccctgtaggtcctcctgga gagctgggagaaaagggttctcaggggccacttgggccgagaggacaaccaggtgatgct ggacccagaggtatgactggccccagaggtcggcccggtcccccaggcatgcaaggcatt cgaggaattgatggggctcagggttcaaagggaaatataggaccgccaggagaagtagga gcacccggacagcagggcaaccctggaatcattggttttcctggtcctcaggggttagta gggctgccaggagaaaaaggtcctcaagggaagaaggggatgagaggcttgccaggaaat gacgggcccccaggtcaccctggacgagaaggtaccccgggggaaaaaggactgccaggt cctccaggtgtccaagggcctgttggataccctgggcaacgaggagttaagggagcagat gggctcagaggtttaaagggcagcaaaggagagaagggagaggatggttttccaggggcc aagggggagatgggggcaaagggggatgttggggacaatggagcaccagggtctcgaggc gaagatggacctgaaggtcccaaaggccagttgggtccccagggggaggctggacttatt ggtattcccggagagaagggtaaactgggagtaccgggactgccaggatttccagggcga caggggccaaagggatctgatgggtttcctggttcagtgggagctttgggagaaaaaggg aaaaaaggccctgcaggacaaccaggaagtgcaggccagaggggaccaaatggtgcacga ggtgccaggggagcgagagggcctactggtaaatcaggagaaaagggtgcttcaggacat gatggcccaccagggccatctggagaaaggggacctcaagggctacaaggaaggaatgga gagccgggacctaaaggagcagttggtccagctgggaaagatgggcttccaggtcaccca ggccaaagaggagagccgggattccaaggaaagactggacccccaggaccttcaggtgtg gtggggcctcagggcaaatcaggagagcccggcccaccaggggaccgaggtcacccagga gcaccaggtgtacctggagagcatggtttacctgggactgctgggaaggaaggtggaaag ggggaccccggtttacatgggacatctgggaaaaatggacctccaggcatgaaagggttc agagggagcagaggagccccgggcattatgggacctcctggtctgaaaggtggatcggga cctcgtgggtcaccaggagccatagggccaacgggtgagaggggccctccaggaccagct ggtgccattggacagcctggtagggccggagcaattggaggacctggaccaatgggagag aagggggagcctggagagaagggtccaataggaccggcaggtcaggatggggaccaggga cctgtagggatgcttggggcaatgggcactgcgggacctgcaggagaggacggggataag ggagagcagggaaaacctggacagaaaggcagcaaaggagacaaaggagaaggagggcct ccagggcctactggcccccaggggccgataggtcagcctggacttccgggtctagatggt ttgccaggtcctcggggccaacagggcatgtatggccccaaaggagatgaaggtcccaga ggcttcaagggctctacaggaccaataggattacagggcatgcctggcctaccaggagaa aaaggcgagagtggccatgtgggactgatgggtccacctggacaacaaggaccttctgga tctcaaggacctattggggggcaggggccacctggtcgtcccgggatgattgggcagcca ggtgttgttggagagaagggtgaggatggtgaggcaggtgatcctggagcagttggtgtt tcaggaaagccaggagcaaaaggagaacaaggggagaagggagatacgggtcctccagga atgtctggtcctccaggagctagaggcaccccaggggaggatggagccaaaggcaatgct ggtcctataggtctgactggggaccttggacagcagggagaagctggacccaacggtgtt gatggcctctctggatctaaaggagacacaggagaccctggaaaccttggacccccaggg gcacccggggaacctggaccacctgggcctccagggcgaaggggccacatggggaaacca ggaaaggaaggaaaagcaggcctgaaaggagcgaagggtgctctgggattggaaggtccc attgggaagacgggccctgtgggagcccaggggcatcctggcaagcctggtccccagggt ctgagagggatccccgggcctgcaggtgagcagggtttaaatggaccaccaggccagaca ggaccaccaggtcccatgggtccaccgggtataacaggactgaagggagaccccggcaag aagggagacaagggtcatggtggtgtaataggtctgatagggccaccaggagacattgga gagaagggtgacagaggactaccaggaaaccagggattactgggtccaaagggagatgag ggtccagttggttcatcaggtcctcacggtccacctggtcctacgggtctgtctggtgtg attggtcagaagggctctaaaggaaatcagggtccaattggtcctagaggagacactggg cccgcaggacctccaggactcccaggactaccagcagctggtgtggtccctctgccacaa cgaggcagaaggaggagaaatcactcctgggtggatggtactgcacttgaagatgaagag gatggggaggaggaggccataggtgggggagaggaggaaatgatgcaaggggatcaggcg gagcaggacagccagctaaacgaaaagaagggccaaggcatggaggaagtgtttgcctct ctatcctcgatgaaagtcgaagtagaaggtctgcgcaccccgcaagggacataccacagc cccgcccgcacctgcaaagagctttggcttctccacccagatctccccaacggcgaatac tggatagatcccaaccagggttgccatagagactccttcaaggtgttttgtaacttcacc gcacagggagagacgtgtctgtaccccgacaagaagttccagtcggtaaaattagcatcc tggaaagaggaaaagcctggcagatggtacagtcaattcaggaaaggaaaaaagttttcc tactccgggtcagatggcgtttcagtccacattgtccagatgaccttcctgaagctgcta agtgccacagccaagcagatattcacctaccactgccttaactctgctgcttggctgcac accgccacgtacaaccacgaatacgcactgcgctttagaagcagcgacggcgaggagctg acatacgagaacacacattacatcactgcactatacgacgggtgtcggacacgctcaggg caggagaggacagttttggaatttgactctccgctgtccaacacgcttcccatcatcgat gtagctgtgtccgattttggaaataagaaccagaaatttggtttcgaagttggcccggtt tgtttcaacggttaa

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