Maylandia zebra (zebra mbuna): 101466114
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Entry
101466114 CDS
T02814
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101466114 (hfm1)
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101466114 (hfm1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101466114 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101466114
NCBI-ProteinID:
XP_004570604
LinkDB
All DBs
Position
LG18:complement(18820030..18840370)
Genome browser
AA seq
1584 aa
AA seq
DB search
MSSYLQSNVCYHSEYIAVLSDEMLDSDDCTLALDGLFFDKPAVHEVKPLHQEVSQWQLEE
PPSLTHIPATQDIQEEAESLSTRYSFSEATHKFQPLFKGSAGLKVLPSAISSSCSFNSDK
KETEKTNGGSSSSTSQCDGLQGGEGFRDYSQGGCQSGRGGDETLQDSGHVGLSRWLSQDC
SKSLPLRTSLFNIQVYTSGGDSLNTGDLSSSGGSNQTTSRPQTFLSQVTMATAPPPPPLP
LQPPRATVGCAAPPFPSKPTLSPPPMGSSAASGRPPQQAAHAETQDKGTKKGFVPPMTPR
PLLIQGSSGSGVLRPVSEIPFKFRSVFSEFPFFNYVQSKALDDVLYTNKNFVACAPTGSG
KTVLFELAIIRLLMETPEPWRDVKAVYMAPIKALCSQCFESWKKKFSPLGLTCKELTGDT
EIDDFFEIQDSHIILTTPEKWDSMTRKWKDNCLLQLVRLFLIDEVHVVKDATRGATLEVV
VSRMKAVHTFRTSQYPEASLSMRVVAVSATIPNVSDIADWLSNENGPAIYLDMDESHRPV
KLRKVVLGFPCGPNQTEFKFDLALNYKIANIIQTYAEQKPALVFCSTRKGTQQSAAVLAK
DARFIMSIEHKQRLMKYANSILDSKLRDLVALGVGYHHAGVDLSDRKLIEEAFTMGDLPV
LFTTRTLSMGVNLPAHLVVIKSTMQYVAGSCQEYSEADLLQMIGRAGRPQFDTSATAVIM
TKIQTREKYLKLMNGIEVIESSLHSHLVEHLNAEIVLQTISDVKMALDWIRSTFLYIRAL
KNPTHYGFSADLDRCGIEAKLQELCLKNLNSLSSVGLISMDEDITIKPTEAGRLMARYCI
AFDTMKQFSKVSGTENLSDLIELLSKSREFSDIQLRVNEKRSLNALNRDKNRVTIRYPID
GKIKTSEMKVNCLIQAQLSSIPVQDFGLTQDTAKIFRIGMRISRCLSEFLSQRVKAVFSA
VVNSLILAKCFRAKLWENSPYVSKQLEKIGQTLSTAMVHAGLTTFSKIEQTNARELELIL
NRHPPFGNQIRESVIHLPKYDVMVEQLPRYSSTTAEIVLKVSLKNQAQLLTRRAAQDHHY
ASVVIGDADNNVVFLQKLTDVMLLKGGSWSKKIEVAKAMKGDEISVHLISSEYVGLDIQQ
KFTVYYSAARRFGTENPHNITQDARRPQSVLKPLSTNQAATHRENGTSVGEESSCSFDMG
NKRHCNHFCKNKAFCAHDCCKVGVTVTRKRSANQETSFTSYLKDLRSRCDTFAPTPVKRL
KMKMAEEPVSLSMQRFAYKPKEMLPPPSWNKENLCKASVRPQSGTDLASEAQLPDVESLN
DLDGDYDDYYVEDMYTTMGGPSQNAAAAHPHHQSSSLWMTTDMSVGSQDSQQDLNQVNIT
STGHSKSSTALPEQAALCKNTSSLQIPTVNFDLGNEWDDWGDFDDDNLIHASEPALASYT
TAQPQIQQCGENRTPGYVTASAPVLLSHSHIKPSINAVTTPLRLTSTNVSPEIKKAGPSP
VSRTFTPQKRITPKWNPKVHRPNIFSEETTIKTSLELLKQPEEAKVTRRLDFFSALSAPP
NASSSLNRSSKEEDAFVGIFDGIF
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtatctgcagagtaatgtctgttatcacagtgagtacatagctgtattatct
gatgagatgttggactctgatgactgcaccttggccttggatggtctgttttttgacaaa
cccgctgtccatgaagtaaaaccactgcaccaggaggtcagtcaatggcagctggaagag
cctccatctcttactcatattccagccactcaggatatacaagaggaagctgaatcgctc
tctacacgatacagtttctcagaggcaacccataagtttcagcctctttttaaaggatct
gctggccttaaggtgctaccttcagcaatcagcagttcctgcagttttaacagtgataag
aaagagactgagaagactaacggaggtagcagcagcagcaccagccaatgcgatggcctc
cagggaggtgaagggttcagggattactctcagggtggttgtcagagtggcagaggtggc
gatgaaaccctgcaggactctggtcatgtgggcctcagcagatggttgtctcaggactgc
agcaaaagcctgcctctacggacaagcttgttcaatattcaggtgtataccagtggaggt
gactctttaaacacaggtgacctcagtagcagtggcggcagcaatcagacaacatccaga
cctcaaacttttctcagtcaggttaccatggcgacagcgcctcctcctcctcctcttcct
cttcagccgccacgggcgacagttggctgcgcagctcctcctttcccctccaagcccacc
ctctcaccccctcccatgggttcatctgcagcgagcggccgacccccgcagcaggcggca
catgcagagacgcaggacaagggcacaaagaaaggtttcgttccgcccatgacgcctcgg
ccgctcctaatccaaggatcttctggatctggagttttgcgcccagtttcagaaatacca
tttaagttcagatctgtcttcagtgagtttccctttttcaattacgttcagtccaaagct
ctggatgatgttctttatacaaataaaaactttgtggcctgtgctccgactggatctggt
aaaacagtgctgtttgagctggcaatcattcgcctgctaatggagacaccagagccctgg
agagatgtcaaagctgtatatatggcccctatcaaagctctctgcagtcagtgctttgag
agctggaaaaagaagtttagtcctctggggctgacctgcaaggagctgactggtgacaca
gagatcgatgacttctttgagattcaggactcccacatcatcctgaccacacctgaaaag
tgggacagcatgacccgaaagtggaaggataactgtttgctgcagctagttaggctcttc
cttatcgacgaggtgcatgtcgtgaaggatgcaacccgcggtgccacgttggaagtggtg
gtgagcaggatgaaggcagtacacaccttcaggacttcacagtatccagaggccagcctc
tctatgagagttgtggctgtgtctgctaccatacccaatgtatctgatatagcagactgg
ctgtcaaatgagaacggcccggccatatatctggatatggatgagagccaccgtccggtg
aagctaaggaaggtggtgctgggattcccctgtggtccaaatcaaactgagttcaagttt
gatttggcacttaactacaagatagccaacatcatacagacgtacgctgagcagaagcct
gcacttgtgttttgctctacaaggaaaggaactcagcagtcagccgcagttctggctaag
gatgctcgattcatcatgagcatcgagcacaagcaaaggttgatgaaatatgcaaactcc
attctcgattctaaactgagagatttggtggcgttaggagtcggctaccatcacgcagga
gttgacttgtctgatcggaagttgatagaagaagccttcactatgggagacctgcctgtc
ctctttaccaccaggactttatccatgggggtaaacctaccagctcacctggtggtgatc
aaatccaccatgcagtatgttgcaggctcctgtcaggagtacagcgaggcagatctgctc
cagatgataggccgtgctggaagaccacagtttgacacatctgctactgctgtgatcatg
accaagattcaaaccagagagaagtacctgaagcttatgaatgggatagaagtcattgag
agcagcttacacagccacctggtggaacacttgaatgctgagattgttctgcagactatc
agtgatgtcaaaatggctttggactggattcgctccaccttcctttacatcagagccctc
aagaaccccacacactatggattctctgccgacctagacagatgtggaattgaagcaaaa
ttgcaagaactgtgtctgaagaatctcaactctctgtcctctgttgggctgatctctatg
gatgaggatatcaccatcaaaccgacagaggctggcaggttgatggctaggtactgcatt
gcctttgacaccatgaaacagttcagtaaagtgtctgggactgaaaacctgtctgatctg
attgagctgctgtcaaagagcagagagttcagtgacatccagctgagagtgaatgagaaa
aggtccttgaatgctttgaacagggacaaaaacagagtcaccatcaggtatcccattgac
ggaaagatcaaaaccagtgagatgaaagtaaactgtttgattcaggctcagttaagctcc
atcccagttcaagattttggacttacacaggacacagcaaagatcttcaggattggcatg
cgcatcagcagatgtctgtctgagtttctgagtcagagggtcaaggctgttttttctgct
gtggtcaactccctgatcctggctaagtgcttcagagcaaagctttgggaaaactcaccc
tatgtttccaaacagctggaaaagataggccaaactctgtcaactgccatggtgcatgct
ggactcaccacattcagcaaaatagagcaaaccaacgccagagagcttgagctgattctc
aataggcatccgccatttggaaaccaaatcagagagtctgtcatacacctcccaaagtat
gacgtaatggtggagcagcttccaaggtacagcagcaccacagcagagattgtgcttaaa
gtgagcctcaaaaaccaagcacagctgctgaccaggagagcagctcaagaccaccattat
gcctccgtcgtcatcggagacgctgataacaatgtcgtctttctgcagaaactcacggac
gtaatgctgctgaagggtggtagctggtcaaagaagattgaggtggcgaaggctatgaaa
ggagatgagatcagtgtgcatcttatcagttcagaatatgtgggtctggacatccagcag
aagttcacagtgtactactctgcagctcgaagatttgggactgaaaatccacacaacata
acgcaggatgccaggagaccgcaatcggtgctgaaaccactatcaacaaatcaggctgca
actcacagggagaacggcacatctgtgggagaagagagcagttgtagctttgatatgggc
aataaaagacattgcaaccacttctgcaaaaacaaggctttctgtgcccatgactgttgt
aaagtaggtgttactgtgacaagaaagaggtcagcaaaccaagaaaccagtttcacttca
tatttgaaagacctgaggagccgatgtgacacatttgcgccgacccctgttaagcgactc
aaaatgaaaatggctgaggagcctgtgtcgctcagcatgcaaaggtttgcttacaaaccc
aaagagatgcttccacccccttcatggaataaagaaaatctctgtaaagcttcagtgaga
cctcagtctgggactgacttggcaagtgaagctcaactacctgacgtagaaagcctgaat
gaccttgacggagattatgatgactattatgtggaggacatgtacacaacgatgggaggg
ccttcccaaaacgctgctgcagctcatcctcaccatcaaagttcctcgttgtggatgacc
acagatatgagtgttgggagtcaggactctcaacaggatctaaaccaggtcaatataacc
agcacgggtcactcaaagagctccaccgcactgccagaacaggctgctctctgcaaaaat
acttcatccctccagataccgactgtcaactttgaccttggaaacgagtgggatgactgg
ggcgattttgatgatgataatctgatccatgccagcgagccagcactggcttcatacaca
actgcacaacctcaaattcagcagtgtggtgaaaaccgcacaccaggctatgttacagct
tcagcaccagtattactcagccactcacacatcaaaccttccataaatgctgtgactaca
ccactgaggttgacttcaacaaatgtcagtcctgaaatcaaaaaagcgggaccctcacca
gtcagccggacattcacaccacagaagagaatcacacccaagtggaatccaaaagtgcat
aggccaaatattttcagtgaggaaaccactataaaaacatcattagaacttctaaaacag
cccgaggaggcaaaagtgactaggagattggatttcttttcagcattgagtgccccaccc
aacgccagctcatctctcaatagaagcagcaaagaggaagatgcttttgttggcattttt
gatggaatattttag
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integrated database retrieval system
