Maylandia zebra (zebra mbuna): 101466590
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Entry
101466590 CDS
T02814
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
mze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101466590 (palb2)
03460 Fanconi anemia pathway
101466590 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101466590 (palb2)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101466590 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
101466590 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
101466590
NCBI-ProteinID:
XP_004569065
LinkDB
All DBs
Position
LG6:2056578..2065048
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AA seq
1352 aa
AA seq
DB search
METTVGDILHCEEQLRSTLHSDDKEKLRRKLAELQREYLRTAQRLQRAERLEAVQKHVRS
RIAEQNHLEQRDTEAASNLRLSPSSLILNSSGDTAQGLTQSQRHTEGPAESDNSRRNQVI
KFSLPSDACPQTPDLSHAEPTGYRTGSSLRLRSRRSRLRWESRSTENNEKGQEQGEGMES
AKRAGEEEKLTSDEADAINESEELFSGTDSESPSLLLTHWSTHGYTEPGDIQGKDIPRSQ
EQKEKDAEEKGEGENEPESLLLTTQTENRGQDDTQNKPRKEGARGEDGGNSRGRNEENIS
KDTEQNVGDKTESKKRHDYSVEVKEEKNELTGGGKSGSLMDSCTLVEGLLFPVEYYVRTT
RRMTFSQSQPDMQAVIESQLSRGRHRRSRGRAKGQNRSTQSSDLSQPHTQTDFFSLTTAS
GDPNKPSQAVASVCASAEHSQNSGKISACQMDSSFSPTSARPARGRKRKRGTGRGRSQTG
RASSLNTHQSPGEQTSDDPQPTDIPVSSCQSLQEADGPEPCPIPGETDLATNEPQHVPTH
ITDPPLTSGDNRASSSSASGHPEEVYEIFMKRNNKAYRSPHMNQSTSSWRSLLLPSLSPA
QTSLLRLPSLLSGPLMNLDTHQDFHLPDDQFASLKLLKLRQVTGESAVEPFSSPSYNTRS
SWRRFDFRCTGADAATPLPLPLSLTPTIASSPGHNAEQLAATQSIHIQSVSEEHRLTDKV
MKHSFTEEQQSLAETHSSPTEPVGQKCANVCKETVIVNSHIELQTLMNSADRPVCTENDD
VINHPEKLKLPEKHTYCGVVHASEDLRCINHSEEDKVTTELVSFESPVEELSSSSCADKQ
ACNETNPPGEPLKTPNRLPENQTKSSHGVISQLMLSSPLASAPSLFITPHLPSSTLSTSP
KLPSLGLTPHPITCSLPLTSSPSAPCLNLPPPYSPSRQVLSPPPLSPCPSITYLPPSPSA
LSPSGEIHHLSKPPVRANQHHTVELTSPPSPSGHQLEDSAGQLDLRTEETKEELVIRHMH
TLRAAAGGILVDACCFPGSSDTLCVAAAGKWAVCLWSQASASEWKLIHTWTFSEPVISVF
HVPDAAGLICVTLGQLEIREVRVLSCSSLMQILLCEGILQAVIGVSRSRVVTTSHSATGS
TLQVFTLSDYSSPSSQTLVSPGVCVGALAPVDGLPDALIGTDEGGHLFVWNLKTGQLLCR
VLFGEGFSHTACLRGYSSCGVLFVLLQHQFLSSLEDEEKEGKIKDPKTAFFSLVAINPLS
GKSIPATQLYPPETWAGRLCEADVSGSGVVGLSQNGCACVWDLGHPGASRMVWAPESEGW
QLARWGGLNTLVTGHHNGDVTLYCYSQNSRCC
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactgtgggagatattctgcactgtgaggagcagctgagatctacgctgcat
tctgatgataaggagaagcttcgtaggaagttggctgaattacaaagggaatatctcagg
acagcccagagactgcagcgtgccgagcgcttggaggcagtacagaaacatgtgaggagc
aggatcgctgaacaaaaccacctggagcaaagagacacggaggctgcatcaaatctccgt
ctcagtccttcttcattgatactgaacagcagcggtgacacagctcagggcttaactcag
agccagagacacactgaaggtccagctgaatctgacaactcaaggagaaaccaggtgatc
aagttctcacttccatctgatgcttgcccgcaaacgccagatctcagccatgctgaacct
acaggttatagaacaggttcttccctgcgcctcaggtcacgacgcagccgcctacgctgg
gaaagtaggagcacagagaacaatgaaaagggacaggagcagggtgaggggatggaaagt
gccaaaagagcaggagaggaggagaaactcacatcagatgaagcagatgctataaatgaa
agtgaagagcttttttctggtacagattctgagtctccctctctgctgcttacacactgg
agcacacatggatatactgaaccaggggatattcagggaaaagacatccctagatcccaa
gaacaaaaggaaaaagatgctgaggaaaaaggtgaaggggagaatgaacctgagtcattg
ttgctcacaacacaaactgaaaacagggggcaggatgacacacaaaacaaaccgagaaaa
gaaggggcgagaggagaggatggtggaaatagtagaggacggaatgaagagaacattagt
aaagacactgaacaaaatgtaggggacaaaacagaaagtaaaaaaaggcatgattatagt
gtggaagtaaaagaggaaaagaatgagttgactggaggtggaaaaagtgggagccttatg
gactcctgtacattagtggagggactacttttcccagtggaatactacgttcgaaccaca
agacggatgacattttcacagagccagcctgacatgcaggctgtaatagagtcccagctg
agcaggggacgacatcgcaggagccgaggtcgtgccaaaggacagaacaggagcacacag
agcagcgacctttcacagccgcacactcagacagatttcttctctctaacaactgcatct
ggggaccctaacaaaccatcacaggctgttgcatctgtgtgtgcatctgctgaacacagc
cagaactctggtaagatttcagcttgtcagatggactctagtttttctcccacgtctgct
cgtccagcacgaggccggaagaggaagagaggcacggggagagggagatctcagaccgga
cgagcctctagtttgaacacacatcagtcaccaggtgagcaaacctcagatgatccccaa
cctacagacattccagtctcttcctgtcagtctctccaagaagctgatggaccagagcca
tgcccaatcccaggagaaaccgacctagcaacaaatgaaccacagcacgtgcccacacac
atcactgatcctccgcttacttctggagataatagagcttcttccagctctgcctctgga
catccagaggaggtctatgaaatctttatgaagaggaacaacaaggcttacagatcccca
cacatgaaccaaagtacatcgagctggcgatctctcctcttgccctccttgtcaccggct
caaacgtctctgcttcgtcttccctctctgttgtctggcccgctgatgaacttggacacc
caccaagattttcatctcccagatgaccagtttgcctccctgaagctcctcaagcttcgc
caagtcactggagaatctgcagttgaacctttctcatccccatcttacaacacacgcagc
agctggcgccgctttgactttcgatgcaccggcgctgatgcagcgacgcctcttcctctc
ccgctaagcctcacacccacaattgcaagttcaccaggtcataatgcagaacagctggct
gctacccagtccatacacatccagagtgtatcagaagaacacaggcttacagataaagtg
atgaagcactccttcactgaagagcagcagagcttggcagagactcactctagcccaaca
gagccagtggggcaaaagtgtgctaatgtctgtaaggaaactgtgattgtgaactctcat
attgaacttcagactctcatgaactctgcagacagaccagtctgcacagagaatgatgat
gtcatcaatcacccagaaaaacttaaattacctgaaaaacacacatattgtggtgtggtc
catgcttcagaggatctgaggtgtataaatcacagtgaagaagataaagttaccactgag
ctggtttcctttgagtcacctgtagaggaactctcctccagcagctgcgctgataaacaa
gcatgtaatgaaacaaaccctccaggagaacctctgaagactccaaacagacttcctgaa
aatcagaccaaatcttcacacggtgtcatctctcagctcatgttgagttcccctctggct
tcagcaccctccctctttataaccccacacctgccttcatccaccctaagtaccagccca
aaactaccctccctaggtctcaccccccaccctatcacctgcagcctccctctgacctcc
tccccctctgccccttgtctcaacctgcctccaccatacagcccttccagacaggttctc
tctcctccacccctgtctccctgtccctccatcacttacctccctcctagcccctctgct
ctctctccatctggagagatccaccatttatctaagccaccagttagggccaatcagcat
cacacagttgaactcacttctcccccgagtccctccggccatcagctggaggactcagct
gggcagttggacctgagaacagaggaaacgaaagaagaacttgtaattagacacatgcac
acattgagggctgcagcaggaggcattctggtagatgcttgctgttttcctggatcctca
gacactttgtgtgtagcagcagcaggaaagtgggcagtgtgcctttggagtcaagcttca
gcatctgaatggaaattaatacacacctggacctttagtgagccagtgatcagtgtgttt
catgtcccggatgctgctgggctgatctgtgtgactctgggtcagctggaaatcagagaa
gtgagagtgctgtcatgctccagcctcatgcaaatattgctctgtgaggggattcttcag
gcagtgattggtgtgtcccggtccagagtggtgaccacctcccactcagccacaggttcc
actctgcaggtgtttacgctgtcagactacagctcaccaagctctcagactctggtatct
ccaggtgtttgcgtgggagcgcttgcaccagttgacggacttcctgatgctctcattggt
acagatgagggcggacacctttttgtctggaatctaaagactggacagctgctgtgcaga
gtcctctttggagagggtttttctcacacagcctgcctcagaggatattcctcctgtgga
gtgttgtttgtcctgctgcagcatcagtttctaagctctttagaagacgaagaaaaagaa
ggaaaaataaaagatcctaagactgcatttttctccttggtcgccattaaccctctaagt
ggaaaatccatccccgctactcagctgtacccaccggaaacctgggctggcaggctgtgt
gaagccgacgtcagtggctccggcgtggtgggcctgagtcagaacggctgcgcctgtgtg
tgggacctcgggcacccgggggcttcgaggatggtgtgggctccagagagtgaaggctgg
cagctggctcgatgggggggattaaacacgctggtgactggacatcacaacggagacgtg
actttatactgctacagtcagaactcgcgctgctgctaa
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integrated database retrieval system
