Maylandia zebra (zebra mbuna): 101466821
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Entry
101466821 CDS
T02814
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101466821 (casc3)
03015 mRNA surveillance pathway
101466821 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101466821 (casc3)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101466821 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101466821
NCBI-ProteinID:
XP_004556546
UniProt:
A0A3P9B4U8
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Position
LG4:29934103..29941648
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AA seq
762 aa
AA seq
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MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPSSKPRGREPDPAEPAASRVPAKSDVES
ECESEDGVGEAVLSDYDSADPEDNGSHSEGVEEEEEAEQYSDEEAPAAASEPQPPTTDGP
VEGAQGEEEEGGEAEEEEEAGGRSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGDKP
GQQLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGPGDRGYRQRRPRPTLSPSRDKRWRDGGGERPVRSWQNR
GGGLNRGGAPPPSSVHPSSSSPSSAQRSGVPSRPPPSRSRPPQSNLHPPPSSHYRNNESN
APLVHHRERPGPRAEAEPTGERGGVRGGRGGRAPSVVIEDITVSQGGATEQDLSVGAVTP
AASPQPGGYQSTSPRRQQEQRGGTDRSASGLAASSSGSDPSLQSAAATNREASPPAERPV
ERKSYSLARRTRSRPADLGSKQASVEESVAGGNTSSPSNVGGKSWSGGGDAPSQAGGGVT
ELDQDVARLNLARQSWSPTSYVRSEMRGLPNPLHMPSGPPQFSSIEEMGVGNNRAKRYSS
QRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGDSPAPMPPQGMLVQPEMHIPHPGL
HPHQSGGPIANPALYGGPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPTMYPNPQGQTQVT
YGGVTYYDTVQQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggatgacgacgag
tccgggtcgggttcggacagcgggaggtccgggtccccgtcctcgaagccccggggacgg
gagcccgacccggcggagccggccgcgagccgggtcccggcgaagagcgacgtggagtcc
gagtgtgagagtgaagacggcgttggagaagccgtcctctcagattacgacagcgccgac
cccgaggacaacggctcgcattcagagggagtggaggaggaagaggaagcagagcagtac
agcgacgaggaagctccagcagcagccagcgagccccagccccccactacagacgggcct
gtggagggagcgcagggagaggaggaggagggcggagaagctgaggaggaagaagaggct
ggagggcggagcaaagaggagagcaaagcagaggagaagggaaacctagcaggagagcga
cagagcggagacggacaggagtcgacggacgacccggagacgaaggcgggggacaaaccg
gggcagcagctggacgacgacgaggacaggaagaacccggcgtacatcccgaggaagggt
ctgttcttcgaacacgacgtcagagggcacgctcaggaggaggagaggccgaaaggcaga
aacaggaagttgtggaaagacgagggccgctgggagcacgacaagttcagggaggaggag
caggcgcccaagagccgcgaggagctgatcgcaatctatggttacgacatccgaaacggc
ggcggccccggagaccgagggtacagacagcggaggcccagaccgactttgtctcccagc
agagacaaacggtggcgagatggaggcggcgagcggcccgtccggtcctggcagaacagg
ggaggaggtctgaaccgaggaggagctcctccaccttcatctgtccacccctcctcttcg
tcgccatcctctgcacagcgaagcggcgtcccctccagaccgcctccctcccgtagcaga
ccaccccagagtaacctgcaccccccaccttcgtctcactacaggaacaatgaatcaaac
gcacccctggtgcaccaccgagagcggccgggtcctcgggctgaggcggagcctacaggg
gaaaggggaggtgtcagaggagggcgaggaggaagggcgccctctgtggtcattgaggac
attacagtcagtcagggaggggccacggagcaggacttgagcgttggcgccgtaacgccg
gcagcgtcgccacagccgggcggttaccagtccacatcgccgagacgccagcaggagcag
cgaggcggcacggacagatctgcatcaggattggccgcttcctcttccggctccgacccc
tcccttcagtcggcagcagcgaccaatcgggaagcttcccctcccgccgagcggccagtg
gagcgcaagtcttactcgctggctcgcaggactcgctcgcgtcccgcagacctgggcagt
aaacaggcgtctgtggaggagtccgttgccgggggcaacacctcttctcccagcaacgtg
gggggaaagagctggtcgggtggaggcgacgcgccgagccaggcgggaggaggtgtgacg
gagctggaccaggacgtggctcgactcaatctggccaggcagagctggagcccgacctcg
tacgtgcggtctgagatgagaggccttcctaaccccctgcacatgcccagcggcccgccg
cagttctccagcatcgaggagatgggtgtcggcaacaaccgggccaaacgctactcctcc
cagcgacagagagccgtgcccgagccggcgccgcccatgcacctgggagtgatggaggga
cactactatgagcccatgtcgtaccagggaccaatctatgcccacggggatagccccgcc
cccatgccgccacagggcatgctggtgcagcctgagatgcacatcccgcatcccggtctc
catccccaccaatcaggaggccccatcgctaaccccgccctatacggaggcccaccagtg
tctctttcaccagggcaaccacagcaactgctgccaccgcctttctaccctccaccgggg
gtcatgaccttcccctaccccaccatgtacccaaacccacagggtcagacccaggtgacc
tacggaggcgtgacgtactacgacacggtgcagcagcaggcccagcccaagccttcgccc
ccccgccgcacatcccagcccgtcaccgtcaagcccccccctccagaggtgccctttgcc
tcagagtga
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