KEGG   Maylandia zebra (zebra mbuna): 101466821
Entry
101466821         CDS       T02814                                 
Symbol
casc3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03013  Nucleocytoplasmic transport
mze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101466821 (casc3)
   03015 mRNA surveillance pathway
    101466821 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101466821 (casc3)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101466821 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 101466821
NCBI-ProteinID: XP_004556546
UniProt: A0A3P9B4U8
LinkDB
Position
LG4:29934103..29941648
AA seq 762 aa
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPSSKPRGREPDPAEPAASRVPAKSDVES
ECESEDGVGEAVLSDYDSADPEDNGSHSEGVEEEEEAEQYSDEEAPAAASEPQPPTTDGP
VEGAQGEEEEGGEAEEEEEAGGRSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGDKP
GQQLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGPGDRGYRQRRPRPTLSPSRDKRWRDGGGERPVRSWQNR
GGGLNRGGAPPPSSVHPSSSSPSSAQRSGVPSRPPPSRSRPPQSNLHPPPSSHYRNNESN
APLVHHRERPGPRAEAEPTGERGGVRGGRGGRAPSVVIEDITVSQGGATEQDLSVGAVTP
AASPQPGGYQSTSPRRQQEQRGGTDRSASGLAASSSGSDPSLQSAAATNREASPPAERPV
ERKSYSLARRTRSRPADLGSKQASVEESVAGGNTSSPSNVGGKSWSGGGDAPSQAGGGVT
ELDQDVARLNLARQSWSPTSYVRSEMRGLPNPLHMPSGPPQFSSIEEMGVGNNRAKRYSS
QRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGDSPAPMPPQGMLVQPEMHIPHPGL
HPHQSGGPIANPALYGGPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPTMYPNPQGQTQVT
YGGVTYYDTVQQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggatgacgacgag
tccgggtcgggttcggacagcgggaggtccgggtccccgtcctcgaagccccggggacgg
gagcccgacccggcggagccggccgcgagccgggtcccggcgaagagcgacgtggagtcc
gagtgtgagagtgaagacggcgttggagaagccgtcctctcagattacgacagcgccgac
cccgaggacaacggctcgcattcagagggagtggaggaggaagaggaagcagagcagtac
agcgacgaggaagctccagcagcagccagcgagccccagccccccactacagacgggcct
gtggagggagcgcagggagaggaggaggagggcggagaagctgaggaggaagaagaggct
ggagggcggagcaaagaggagagcaaagcagaggagaagggaaacctagcaggagagcga
cagagcggagacggacaggagtcgacggacgacccggagacgaaggcgggggacaaaccg
gggcagcagctggacgacgacgaggacaggaagaacccggcgtacatcccgaggaagggt
ctgttcttcgaacacgacgtcagagggcacgctcaggaggaggagaggccgaaaggcaga
aacaggaagttgtggaaagacgagggccgctgggagcacgacaagttcagggaggaggag
caggcgcccaagagccgcgaggagctgatcgcaatctatggttacgacatccgaaacggc
ggcggccccggagaccgagggtacagacagcggaggcccagaccgactttgtctcccagc
agagacaaacggtggcgagatggaggcggcgagcggcccgtccggtcctggcagaacagg
ggaggaggtctgaaccgaggaggagctcctccaccttcatctgtccacccctcctcttcg
tcgccatcctctgcacagcgaagcggcgtcccctccagaccgcctccctcccgtagcaga
ccaccccagagtaacctgcaccccccaccttcgtctcactacaggaacaatgaatcaaac
gcacccctggtgcaccaccgagagcggccgggtcctcgggctgaggcggagcctacaggg
gaaaggggaggtgtcagaggagggcgaggaggaagggcgccctctgtggtcattgaggac
attacagtcagtcagggaggggccacggagcaggacttgagcgttggcgccgtaacgccg
gcagcgtcgccacagccgggcggttaccagtccacatcgccgagacgccagcaggagcag
cgaggcggcacggacagatctgcatcaggattggccgcttcctcttccggctccgacccc
tcccttcagtcggcagcagcgaccaatcgggaagcttcccctcccgccgagcggccagtg
gagcgcaagtcttactcgctggctcgcaggactcgctcgcgtcccgcagacctgggcagt
aaacaggcgtctgtggaggagtccgttgccgggggcaacacctcttctcccagcaacgtg
gggggaaagagctggtcgggtggaggcgacgcgccgagccaggcgggaggaggtgtgacg
gagctggaccaggacgtggctcgactcaatctggccaggcagagctggagcccgacctcg
tacgtgcggtctgagatgagaggccttcctaaccccctgcacatgcccagcggcccgccg
cagttctccagcatcgaggagatgggtgtcggcaacaaccgggccaaacgctactcctcc
cagcgacagagagccgtgcccgagccggcgccgcccatgcacctgggagtgatggaggga
cactactatgagcccatgtcgtaccagggaccaatctatgcccacggggatagccccgcc
cccatgccgccacagggcatgctggtgcagcctgagatgcacatcccgcatcccggtctc
catccccaccaatcaggaggccccatcgctaaccccgccctatacggaggcccaccagtg
tctctttcaccagggcaaccacagcaactgctgccaccgcctttctaccctccaccgggg
gtcatgaccttcccctaccccaccatgtacccaaacccacagggtcagacccaggtgacc
tacggaggcgtgacgtactacgacacggtgcagcagcaggcccagcccaagccttcgccc
ccccgccgcacatcccagcccgtcaccgtcaagcccccccctccagaggtgccctttgcc
tcagagtga

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