Maylandia zebra (zebra mbuna): 101473908
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Entry
101473908 CDS
T02814
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03320
PPAR signaling pathway
mze04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101473908
03320 PPAR signaling pathway
101473908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101473908
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101473908
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101473908
Nuclear receptors [BR:
mze03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101473908
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Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
101473908
NCBI-ProteinID:
XP_004573099
UniProt:
A0A3P9DDB6
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Position
LG22:5288732..5311006
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AA seq
470 aa
AA seq
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MGDSRDSHSPDSSSVSSPPSGQRSPPLVPSAAASMTSLPPITTAGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPM
LSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIVDKRQRNRCQ
YCRYQKCLAMGMKREVAKMNDRSVQEERQRNKDRDGDVESTSAVNEEMPVEKILEAEMAV
EQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLTE
LVSKMRDMQMDKTELGCLRAIILFNPDAKGLSNSSEVELLRERVYASLESYCKQKYPDQQ
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattcccacagcccagacagttcgtctgtgtcctccccaccttcg
ggccagcgctcccctccgctggttccctcagctgcagcttccatgacctccctgcctccc
atcaccactgccggggtcaatagccccatcagcagcattggttcccccttttctgttatc
agctcttcgctggggtctccctgcctacctggcacaccgtcagtgggttacggcccaatt
agcagcccccagatcaactcaacagtgtcgatgtcggggcttcatgcagtgagcagctcc
gatgatgtgaaacctccactgggcttgaaacagctgtcatctcacagccctgggccgatg
ctttcccagaaacgtctttgttccatctgtggagatagatcctctggtaagcattatgga
gtctacagctgtgagggctgcaaaggtttcttcaaaagaactgtgcgaaaagacttgacc
tacacctgtcgggacaataaagactgtattgtggataagagacagaggaatcgctgccag
tactgccgctatcagaagtgcctggccatgggcatgaagagagaagtggccaagatgaac
gacagatctgtccaagaggagcggcagaggaacaaggatagagatggtgacgtggagtcg
accagtgcagtcaatgaggagatgccagtagagaagattttggaagcagagatggccgta
gagcagaagacagagctgcatgcagatggaagttcaggcggcagctctcccaacgatcca
gtcaccaacatctgccaggcagcagacaagcagctcttcacgctggtggagtgggccaag
aggatccctcatttctcagagctgcccctggatgaccaggtcatcttgctacgtgcaggc
tggaatgagctcctgattgcatcgttctcccatcgctccatctcggtgaaggacgggatt
ttacttgccacaggcctgcatgtccacaggaacagtgcccacagtgcaggtgttggagct
atctttgacagggcgcacaatgccgaggttggggccatatttgacagggttttgacagag
cttgttagtaaaatgagagacatgcaaatggacaagacagagctgggctgccttcgagca
atcattctcttcaatccagatgctaagggtttgtccaactccagtgaggtggagctccta
agagagagggtgtacgcatctctggagtcttactgcaaacagaaatatcccgatcagcag
ggaaggtttgcaaagctcctcctccggctcccggcactgcgctccatcggtctgaagtgc
ctggagcacttgttcttctttaaactgattggtgatacgcccattgacaccttcctgatg
gagatgctagaggcgcctcaccagctcacctag
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