Maylandia zebra (zebra mbuna): 101474046 Help Entry 101474046         CDS       T02814                                  Symbol col24a1 Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mze  Maylandia zebra (zebra mbuna) Pathway mze04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mze00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101474046 (col24a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mze00536]     101474046 (col24a1) Glycosaminoglycan binding proteins [BR:mze00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101474046 (col24a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Motif Other DBs NCBI-GeneID:  101474046 NCBI-ProteinID:  XP_004562184 LinkDB All DBs Position LG17:625555..712304 Genome browser AA seq 1722 aa AA seqDB search MHLGAQRTRSGHVSAAATWNFLLLLSVCSAALSGEDYAAQGVDILYRLGLTTQSHTDDTY ERTSSQPPTYANVPSPFDGPFSGYGVLLDSNSLYEAPVPNLFPSEFGEEFSVIVSLSSWR ANNAFLFSIKDGRDRLRFGIQLLPRRVVVYTAEKASIYFNYNWQDGRLHPFAVGVRARSV SFYANCGGVQQWEQTLGRSQTLGESGGVFTLGRMNSKAAPFSGQVCQLDIYPSAQAAAHY CKYLKKQCRLADTYRLHFPHSDSDIVVNDPPSSHLTKSLLGVAATQNTPIGSTAAIKLSP DRLVTQHSTLSPPIRPHLGDQENISTLKPLSHSATSSLQLYSPTVTTPSSQAALGFAYST TTTTTKNVLAKDTTPQEDTEHSENSTEEERNSRKQPSPDATTGVVSLVRQSQLKEELRNN SITSSRDSGSTSQNFPETHLRANSTTLYRENQVDTSEQNDLDGSYDDVDMGEYDYGYEEP EFFYDYQDGLHGPKGEPGPPGPPGPPGLPGPPGKRGSRGPPGPHGKPGQPGSPGPKGSKG DPGLSPGQAPPGEKGDRGSPGRPGPNGFPGLLGPKGYLGPPGPPGEQGIPGLPGEAGAAG YPGRQGSAGPQGSPGPKGVRGFIGPPGDAGPPGLEGEKGIPGPAGRPGPKGRHGVMGDAG ERGPPGPDGNEGPVGGAGISGFPGLRGDPGPEGPRGLPGMVGPQGPTGRAGLPGLKGDKG ETGQRGEPGEMGYQGDKGAAGAPGLPGPRGKPGPPGKIGEMGVTGSPGPPGPEGFPGDIG APGPNGPPGPKGLQGERGPQGPPGPKGIQGDEGPLGPPGGPGPTGRPGRKGHIGEPGSEG LQGEKGDMGNIGKVGPQGPAGLIGIAGVIGVPGEKGDRGPPGPTGPAGEKGPRGYPGLPG SPGDIGMQGAPGPPGPRGSPGIAGPKGRRGPRGPDGPPGELGPEGIKGEKGEIGPKGEPS LIGKAGNPGERGPPGKPGKPGIPGSTGERGAQGEPGPRGPAGEAGPDGEQGPEGLPGLEG EPGAIGEPGEKGDVGPPGAEGEQGQEGMRGPPGPPGEDGPQGKDGAKGEPGERGPFGEPG EKGTEGDPGPLGPPGEPGKQGFRGPEGKVGPPGNRGRHGKKGERGPPGLAGEIGARGDIG QPGEPGLKGARGTRGTSGQPGVMGIDGQPGLPGYPGHLGKPGPVGPPGPKGEKGYPGEDN RTPGLPGPLGEPGPPGERGERGESGDEGYQGYIGTPGPRGASGPQGPPGSPGSPGEPGPK GEKGAPGLAGKKGARGLVGAPGIEGPTGLPGLTGMKGYPGPDGPPGPTGLAGLPGKQGRQ GQRGSVGLEGPAGRPGPMGELGLPGHSGERGPPGHKGEPGLPGDRGGPGIKGMKGAAGDQ GKKGDPGPKGLSGETGDLGMIGLQGLPGPKGPTGDLGLRGFPGPKGPMGTLGFTGPLGPE GKMGPMGKPGPRGPKGNGGEMGPQGPQGSPGPRGPPGAPGPTRVLYDDLAVYSPSASNDA LRTESFQNMEMSMPDQNTEVLKTLQYLSSVIESIKQPLGTKENPARVCKDLLDCQHKLKD GWFWVDPNLGCTSDAFQVFCNFTAGGQTCLHPVSTDKMVFDIGNVQMKFLHLLSSEASQS ITFHCLSYQPSSTADSFSSSGHKENTRLRFRGWNKQMFEKDTLLEPHVLQDECKIQDGSW HQSRFLFHTQDSGQLPIVDIEEFPTSQINSQRNVEIGPVCFL NT seq 5169 nt NT seq  +upstreamnt  +downstreamnt atgcatttaggagctcaacggacaaggagtggacacgtttccgcggcagcaacgtggaac tttctcctgctcctgtcagtatgctcagcagcactctctggagaagattacgcagctcaa ggagtggatatcctttatcgattggggcttacaactcaaagccacacagacgatacctac gaaaggacaagctcacagcctcccacttatgcaaatgttccctcacctttcgatggcccc ttttctggatatggggtgttgctcgactcaaactccctctatgaggcgccagtgcccaat ctattcccttcagaatttggcgaagagttctccgttatagttagcctaagctcctggcga gcaaacaatgcatttctttttagtatcaaggacgggagggaccggttgcgttttggcatt cagttgctgccacgcagagtggtggtttatactgcagagaaagcctccatctacttcaac tacaactggcaggatgggcggctgcacccttttgctgttggggttcgtgcacgttcagtg tccttctatgcgaattgtggaggggtgcaacagtgggagcaaaccctggggagatctcaa acactgggggaatctgggggtgtcttcactctgggaaggatgaactccaaggcggcacca tttagtggtcaagtctgccaactggatatctatccctcagcccaagctgccgcgcactac tgcaaatatcttaaaaaacagtgccggctggccgacacttaccgattacatttcccacat tctgattcggatattgtggtgaatgaccccccttctagccatttgacaaagtctcttctt ggagtagcagctactcaaaatacacccatcggatctacagcagccattaaactatcccca gatcgtttggtcacgcaacattcaactctgagcccaccaatacgacctcatctgggggac caagaaaacatttccacattgaaaccattatcccactctgccacatcatcactccagctt tatagccccaccgtaactacgccaagtagtcaagcagctctgggttttgcctatagcaca acaaccaccactaccaaaaatgtgttggctaaagacactacgccccaggaggacactgaa cactctgaaaacagcacagaagaagagagaaattccagaaaacagccaagtccggatgcc actacaggtgttgtttccctggtcagacagagccaactaaaggaagaactcaggaacaac tccatcacaagctctagggactctggctccacaagccaaaatttcccagagactcatctg agagccaatagcactactttgtacagggagaatcaggtggacacctcagagcagaatgat ttggatggcagctatgatgacgtagacatgggagagtatgattatggatacgaggagcca gagttcttctatgactaccaagatggtttacatggccccaaaggagagcctggtcctccg ggtcctcctggtccccctggtttacctggtcctccaggaaaaagaggctctcggggtccc cctggtccacatggaaaaccaggacagcctggatcacctggacccaagggttcaaaggga gaccctgggctgtctccaggtcaggctccaccaggagagaagggtgacagaggatctcca ggtcgtcctggacccaatggatttccaggcttactgggtcctaaaggttatctgggtcca cctggaccaccaggagaacaaggcataccaggacttcctggcgaagctggagctgcaggt taccctggcaggcagggctcggccgggccacaaggtagccctggccctaaaggtgttcgt ggtttcattgggcctccgggcgatgctggcccacccgggctggaaggggagaaaggcata cctggacctgctggaagacctggccccaaaggaagacatggtgtcatgggggatgctggg gagagggggcctcctggtccagatggaaatgagggccctgttggtggggctggcataagt ggctttcctggtctaaggggagacccagggcccgagggaccacgaggactgcctggtatg gtgggacctcagggcccaacaggacgagccggcctgcctggattgaaaggtgataagggt gaaaccggacaaaggggcgagccaggagagatggggtaccagggggataagggtgctgct ggtgcacctggtcttcctgggcccagagggaaaccagggccaccgggtaaaattggagaa atgggtgtgactggatcacctgggcctccaggaccagaggggtttcctggggacattgga gcgccgggcccaaacggaccacctggtccaaagggtttgcagggtgagagaggaccccag ggtccgccagggcctaaaggaatacagggcgacgaaggaccactcggcccacccggcggg ccaggccctactgggagacctggaaggaaaggccacatcggtgaacctggctccgagggt ttacagggagagaaaggggacatgggaaatattggaaaagttggaccacaaggtccagca ggcctgattgggatagctggggtgataggagttcctggtgaaaagggtgaccggggacca ccaggtccaacaggtccagccggagagaaggggcccaggggttatccagggttgccaggg agcccaggggacatcggcatgcaaggtgcacctggtccaccgggaccgaggggtagtcca ggcattgctgggccaaagggtagaaggggaccccgaggtccagatggcccaccgggagaa ctgggtcctgagggcatcaagggtgaaaagggggagatcggacctaaaggagagccaagc ttaataggcaaggctggaaatccaggagagagaggccctcctgggaagcctggaaaacca ggtattccaggcagcaccggggagaggggagcccaaggtgaaccaggacccagaggacct gctggagaggctggacctgatggagaacaaggacctgaaggtttaccaggcttagaggga gaaccaggtgccattggagagccaggggaaaagggtgatgttgggcctccaggagctgaa ggggagcaggggcaggagggaatgagaggtcctcccggtccccctggtgaagatggacct cagggaaaagatggagccaagggtgaacctggagagcgtgggccttttggggagccaggg gagaaagggacagaaggggatcctggacccctggggccacctggagagcctgggaaacag ggtttccgtggtccagaaggaaaagtgggtcccccaggaaacagaggacggcacggaaag aaaggagagaggggtcctcctggtcttgctggggagattggcgctcggggagacatcggc cagccgggcgagccaggactgaaaggtgccaggggaactcgaggcacatctggtcagcct ggagtcatggggatagacgggcaaccaggacttccaggatacccagggcaccttggaaag cctgggcccgttggcccgccaggacccaaaggtgaaaagggttacccaggcgaggacaac aggaccccaggactgccagggcccttaggtgaaccagggcctccaggggaacgaggagag cgtggagagtcgggggatgaaggctatcagggctatatcggtacccctggacctcgtggg gcttctggaccacaaggcccaccgggatctccaggctcccccggagaaccaggcccaaaa ggagaaaaaggagctccgggtttggctggaaagaaaggtgcaagaggtctggttggagct cccggcattgaagggccgactgggttacctgggctcacaggaatgaagggttatccaggc cctgatggccccccgggaccaactggcttagcaggactcccaggaaaacaaggtcgacag ggtcagaggggctcagtgggactggaagggcctgctggacggccaggtccaatgggagaa cttggacttcctggacattctggagaaaggggaccgccaggtcacaagggagaacctggc ctaccaggagacagggggggccctggaatcaaaggcatgaagggagctgcaggtgaccag ggaaagaaaggagacccaggacccaaagggctgtctggggaaactggagatttgggcatg attggtttacagggcttaccaggacctaaggggccaactggtgatttaggactgagaggt ttccctggtcctaaaggtcctatgggtactttgggcttcactggacctctaggccctgaa ggaaaaatgggtccaatgggaaaacctgggccaaggggtccaaaaggaaacggtggtgaa atggggcctcagggaccacagggaagccctggacccagaggaccccctggcgctcctggt ccaacaagggtgttatatgacgacttagcagtctacagtccatccgcttccaatgatgcc ctgaggactgagagtttccagaatatggagatgagcatgccagaccagaacacggaagta cttaagactctacagtatttgagcagtgtgatcgagagcatcaaacagcctctcgggaca aaggagaacccagctcgtgtctgtaaagacctgctggactgccagcacaagttaaaagac ggttggttctgggttgatccaaacctgggctgtacgtctgatgccttccaggtgttctgc aactttacagcagggggacagacttgtttacatccagtgtcaactgataagatggtattt gacataggaaatgtccagatgaagtttctccatttactgagcagtgaggctagccaaagc atcacgtttcactgcctgagttatcaaccctccagcaccgcagacagcttcagctccagt ggacacaaagagaacaccaggcttcggtttcgtggctggaacaaacagatgtttgagaaa gacacactacttgaaccacatgtgctacaagatgagtgcaagatccaagatggcagctgg caccagtcacgattcctcttccatactcaggacagtggtcagctaccaattgtagacata gaggaatttcccacttcacaaatcaacagtcagcgaaacgtagaaatcggtccagtctgc ttcctctga

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