Maylandia zebra (zebra mbuna): 101475048
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Entry
101475048 CDS
T02814
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mze00535
]
101475048
Proteoglycans [BR:
mze00535
]
Extracellular matrix (ECM) proteoglycans
Others
101475048
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
DUF4992
DUF3000
Motif
Other DBs
NCBI-GeneID:
101475048
NCBI-ProteinID:
XP_004574279
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All DBs
Position
LG22:complement(1691321..1858273)
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AA seq
1866 aa
AA seq
DB search
MWFTVRLSLCLLGFFLISVFPHTAQGQVSSPRRLRTKVLSPTKLHVSWKEPKGQFESYKV
IYTTRPGGEQKVVQASKQEAKLVIEDFDPSKTYNFKIIAVHEGQESKPLQGKHEAQQSAV
EMAPSQGRKNGSVTQENNEISEAEAGFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLE
NLVKAFSVEIDKTRIGLAQYSGDPRIEWHLNAHTTKESVIDAVKNLPYKGGNTLTGLALT
FVLENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLTKTVCDRVEQLDKKIKGGAEPAPPPAVVAAPR
DLVTSEITARSFRVTWTHASGQVEKYRVVYYPASGGQPEEKVVQGTQNSVELSYLNSLTE
YQVAVFAVYRSAASEALRGSATTLALPTVNNLELFDITHSTMRVRWKAVAGASGYMILYA
PLTEEDASDEKEVKVDDSVTEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLIP
ARNLRFSEVDHSSARITWDSASRKVKGYRIMYVKTNGVQTNEVDVGRVTAWLLKNLTSLT
EYTVGVFAVYDEGQAEVVTDSFTTKTVPDPVDLRSSDISTNSFRVSWAHPASDVVLYRLT
WTPTDGEESSEVLVNGNINTYLIKELTPSTEYEVLLAAIYGNELESDEVILVESTAEKTT
TIATTTTTVAAPRYGVRSMKIDEETTFSMRVSWQPVDPRNARHYRLSYISARGDRAAETR
TVPTGQNSLVLQPLLSDTEYKVSITPVYPEGDGPAAAATGRTLPLLAPRNLRVSEEWYNR
FKISWDVPPSPTMGYRVIYQPLTAPGQALETFVGEDVNTMLIVNLLSGTEYSVKVIASYS
TGSSEALTGRAKTLYLGVTNLSTYQVRMNGLCAQWQPHRHASAYRVALESAVGSQKQETR
LSGGASRHCFNNLKPNMQYKISIYAQLQDGTEGPAVTTAEKTLPVPTPPPTKPPTTTPPP
TIPAAKEVCKAAKADLVFLVDGSWSIGDENFLKIIRFLYSTSGALDRIGPEGTQVAIAQF
SDDARTEFKLNSYSDKEGLLDAINKISYKGGNTKTGRAIQHVKKNIFTEEAGARRGIPKV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FKKIEEKLVTFVCEAATATCPAVPMSGSTMPGFRMMELFGLVENRYSSMSGVSMVPGTFN
TFPCFHLHSDALLAQPTRYIHPEGLPSDYTITLLFRLLADTPEEPFALWEILNKNNEPLV
GVILDNGGKTLTFFNNDFKGEFQTVTFEGPEIKKLFFGNFHKLHLAISKTSAKVFVDCKM
VSEKTVNAAGNISTDGLEVLGRMVRSRGNKDNSAPFQLQNFDIVCSTSWANRDKCCELPS
LRKEVDCPALPKACTCTQDSKGPPGPAGPPGGPGIRGARGERGEPGPVGPTGPVGDTGLP
GPQGPPGRQGPSGRSIIGPPGSPGERGQKGDVGQQGTQGVPGTPGGPGREGPPGPRGLPG
KDGPPGTQGPPGTIGTPGAPGSPGSTGPPGKQGELGPPGPAGTKGEKGERGDLQSTASVQ
AIARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGREGPPGPQGEQGPPGRP
GFPGQNGQNGQPGERGQPGEKGDKGSPGVGVQGPRGPPGPPGPQGQGRPGSSGPSGRPGN
PGVPGRPGAPGPIGPQGPPGYCDQNSCVGYNVGEGEDVTDGDAVPAVQLPPSVFQNYGEV
EEDDPYRYYQPNYPAPRPVAPDDPALALGDIELRSPGVYRTSRSVKEEEEKVGTKRRLKR
GAAWTN
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcacagtcagactgagtctctgcctgctgggcttctttctcatctctgtgttc
cctcacacagcacaaggccaagtttcatcaccaagaaggcttcgtaccaaagtcctgagc
cccaccaagctgcacgtgtcttggaaagaacccaaaggacagtttgaaagctacaaagtc
atttacaccacacgaccaggcggagagcagaaggtggttcaggcatcaaagcaggaagca
aaactggtcatcgaggactttgatccttctaaaacgtacaactttaagatcattgcagtc
catgaggggcaggagagcaaacctcttcagggcaaacatgaagctcagcaatcagctgtt
gaaatggctccatcccaagggagaaaaaacggcagcgtcacacaggagaacaatgagatc
tcagaagctgaagcgggatttatgtgtaagactccagccatagccgacatcgtgatcctg
gtagacggttcctggagtatcgggcggatcaacttcaggctggtcaggaccttcctggag
aacctggtcaaggcgttttcagtggagattgacaagactaggattggtctggctcagtac
agtggagaccccaggatcgagtggcatctgaacgctcacaccactaaagagtctgtaatc
gatgctgtgaagaatctgccatataaaggaggaaacacactgacaggtctggctctgacc
ttcgtcctggagaacagcttcaaacccgagtcaggctccagacccggtgttcccaagata
ggaatcctcatcacggatgggaagtcccaggatgatgtcatacccccagcgcagagcctg
aaggatgctgggatagaactgtttgccattggtgtgaaaaatgctgatgagaatgagctg
aaggcgattgcctcacctccagaggaaactcacgtttacaacgtggcagacttcagcgtg
atgagcgacatcgtggaaggtctcaccaagaccgtttgcgaccgcgtggagcagctcgac
aagaagatcaaagggggggcggagcctgccccgccaccagccgtcgtggctgcacctcgt
gacctcgtgacctcggagataactgctcgtagtttccgggtgacatggacacacgcatcg
ggtcaggtggagaaataccgagtggtgtactaccctgccagtggggggcagccagaagaa
aaggtggtccaggggacacagaacagcgtggagctgagctatctgaactctctgacagag
taccaggtggctgtttttgccgtctatcgcagcgccgcaagtgaagccctgagaggaagt
gctactacattggccctgcccacggtgaacaacctggagttgtttgatattacccacagc
actatgcgggtccgctggaaggccgtcgctggggcttctgggtacatgatcttgtacgcc
ccgctgactgaagaggatgcttcagatgagaaggaggtgaaggtggatgactcggtgact
gaggtggagctggaaggattgactccagctactgagtacacagtgacagtttacgccatg
tacggagaggaagccagtgaccccatgaccagccagcagaccacattaccgctgatccca
gcgaggaaccttcgtttctctgaggtggatcacagctctgcccgaatcacatgggactcc
gcctccaggaaggttaaagggtaccgcatcatgtacgtcaaaaccaatggagtccagacc
aatgaggtggatgttggccgtgtgacagcctggctgctgaaaaacctgacatcactgacg
gagtacactgtcggtgtgtttgccgtctatgatgaaggacaagctgaggttgtgacagac
agcttcaccacaaaaactgtcccggacccagtggacctgaggagcagtgacatctccacg
aacagcttcagggtgtcctgggctcacccggcgtctgatgtggtgctttatcgactcacc
tggacacccaccgacggagaagagagcagtgaggttttggtgaatgggaatatcaacacg
tacctgataaaggaactcaccccctcgacagagtacgaagtcctcctggccgccatttac
gggaatgagctggagagtgatgaggtgatcctcgtggagtccaccgctgaaaaaacaacc
accattgccacgacaaccaccaccgtagcagctcctcggtacggggtgagaagcatgaag
atcgatgaagaaactacgttcagcatgcgggtgtcctggcagcccgtcgaccccagaaat
gctcgacattatcgactgagctacatcagtgcgaggggagaccgagcagcagagacgaga
acagtgcccactggtcagaacagcctggttctgcagcctctgctgtcagacacagagtac
aaagtctccatcactcctgtttaccccgagggagacggaccggcagccgccgcgacggga
cggacgcttcctctcttagctcccaggaacctgcgtgtctcagaggaatggtacaatcgc
ttcaagatcagctgggatgttccaccgtcgcccacaatgggctacagggtcatctaccag
cctctaactgcccctggacaagccctggaaacctttgtgggggaggatgtgaacaccatg
ctgatcgttaacctgctgagcggtaccgagtacagcgtcaaggtcatcgcctcctactcg
accggatccagcgaagccctgacaggaagggccaagaccttgtacctgggcgtgactaac
ctgagtacctatcaggtgaggatgaacgggctgtgtgcccagtggcagcctcaccgacat
gccagcgcctacagagtggccctggagtcggcggttggcagccagaagcaggagacgaga
ctgagcgggggagcgagcaggcactgtttcaacaacctgaagcccaacatgcagtataag
atcagcatctacgctcagctgcaggacgggaccgaagggcctgcagtcaccaccgctgag
aagacactacccgtcccgaccccaccacccaccaagcccccgaccaccacgcctccaccc
acaatccctgctgccaaggaagtctgtaaagctgccaaagcagacttggtcttcctggtt
gacggttcctggagtatcggagatgaaaacttcctgaagatcatccgtttcctgtatagc
accagtggagctctggaccggatcggcccggaaggcacacaggtggctattgcccagttc
agcgacgatgcccggacagagtttaagctgaactcctacagtgacaaggagggtctgctg
gacgccatcaacaagatctcctacaaaggaggaaacactaagacaggtcgagccatccag
cacgtgaagaaaaacatcttcacagaggaggcaggagcgagaagaggaatccccaaagtc
ctcgtggtgctcactgacggtcgatctcaggatgacgtcaacaaagtctccaaagagatg
cagatggaaggttacatcgtgtttgccattggcttcgctgatgctgactacggggagctg
gtgagcatcgccagtaaacccagtgacaggcacgtcttctttgtggatgacctggacgcc
ttcaagaagattgaagagaagctggtgacctttgtgtgtgaagctgcaactgccacgtgt
ccggctgtgccgatgagtggcagcacgatgccaggctttcgcatgatggagctattcggg
ctcgtggagaatcggtacagcagcatgtctggcgtttccatggtacccggcacctttaac
acgttcccctgtttccacctgcacagcgacgcgctgctggcacagccaaccaggtacatc
catcctgaggggctgccttctgactacaccatcaccctgctgttcaggctgctggccgac
actcccgaggagccttttgcgctctgggagatcctcaacaagaacaacgaacctctagtg
ggcgtcatcctggacaatggaggaaaaactctgacgttttttaacaatgactttaaagga
gagtttcagacagtcaccttcgaggggccagaaataaagaagctcttctttggaaacttc
cacaagcttcacctcgccatcagtaagacgagcgccaaagtgttcgttgactgcaagatg
gtgtctgagaagaccgtcaacgcagcaggaaacatcagcactgatgggctggaggttctc
ggtaggatggtccgctcccgagggaacaaggacaactctgcaccgtttcagctccagaac
tttgatatcgtctgcagcacctcgtgggccaacagagacaagtgctgtgaacttcccagt
ctgaggaaggaggtagactgcccggccttgcctaaagcctgcacctgcacccaggacagc
aaaggccccccaggccctgctggaccaccaggaggcccaggaatcagaggagccagagga
gaacgtggagagccaggccctgtgggaccaactggtcctgttggagatacgggtcttcca
ggacctcagggacccccaggacggcaaggacccagtggacgctccattattggacccccg
ggcagtcctggagagagaggtcagaaaggtgatgtgggacagcaaggaactcagggggtt
cctggaacacccggaggtccagggagggaaggacctccaggacccagaggactgccaggc
aaagatggccccccaggcacacagggccccccaggaaccatcggaactccgggagctcca
ggatccccaggaagtacaggccctccaggaaagcagggagagctgggcccaccgggacct
gctggaactaagggagagaaaggtgaacggggagatctccagtcgacagcatcagttcag
gccattgcccgacaggtctgtgagcagctgatccaaagccacatggcgcgctacaacagc
atcctgaaccacgtgccgagtcctccggtgtcaatccgcacagttcccggaccaccggga
gagcctggtcgagaaggacccccaggaccacagggagaacagggacccccaggcagacca
ggcttcccaggacaaaatggacagaatgggcaaccaggagaaagaggacaaccaggagag
aagggtgataagggatctccaggtgtgggtgtacaaggacccagaggacctccaggacca
cctggtccccagggacagggcagaccaggtagctctggaccctcaggacgacctggaaat
cccggagtacccggtcggcccggagcccccggacccatcggcccccaggggcctccgggt
tactgtgatcagaactcctgtgtgggctacaatgttggagaaggcgaggatgtcactgac
ggcgacgctgtccccgcagtccaactaccacccagcgtcttccagaactatggcgaggtc
gaggaagacgatccgtaccgctactaccagcccaactacccggcccctcgaccagtggcg
cctgatgatcccgcactggccctgggtgacattgagctgaggtctcctggcgtctaccgc
acctctcggagtgtgaaggaggaggaagagaaagtcgggacgaagaggcgactaaagaga
ggcgctgcgtggactaactga
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integrated database retrieval system
