Maylandia zebra (zebra mbuna): 101476286
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Entry
101476286 CDS
T02814
Symbol
synpo
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101476286 (synpo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
101476286
NCBI-ProteinID:
XP_004541130
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All DBs
Position
LG2:complement(19910710..19926548)
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AA seq
1169 aa
AA seq
DB search
MEMEKGHTSIRRGVSWSPGGLRKPLQLTQDVQTRGTDYNASWEKTGFNKEHMSRKTNLTR
SASLSEKELKEARVKSQIIAAQLTVPSNSKSRGVQLFNRRKQRVNAFTLESCGERSEEDR
AENVKTNPPSNKLTWAERSSEEKDRDLNLKNTTADKSVFSTPARVRSVGDIMDEPAKDFH
KEEDTDDRVVQERHFLPVKEEQEEEARHQFHEDLEDEAERETPPGSKTTDVIVSVHAEGE
AEINGRQTGPDPAGKLPNGCHGASGPEKVSVPTSKQASSFINRTARPFFSPPTVQSPETV
RPVMDIPPPPSYSTPPLPAFTVPQPVVASPPPPPPSYPTPPLPAFKNQPPQTYYSSPPPM
SPVISPSSPPPSHFSASQYSQLPHYGPPTAPKPSTFVPKPSGEREMTTPIKTGILEEGAA
RRANKKSMFTFKEKPVVAPNPELLSLVQGADERKKHGHKSVPEPGSEEELLALGAEASNF
LAKEEDRTEGARAPEWASCLKSSRTRPRAEHQPEQSLTNVSGKGAQLFAKRQSRMEKYVV
ENQNAGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSDMCAQLSQNLKAQQAVKQKPMK
KPPPPEPVPEPPPLENGCSKIEMDLSRHRPYQLNSSLFIINPVKDPISTLPKGAPQARNQ
LATPTFSRQTSLPNNPPFNFSAQCMSHQIPLSPTGGPDYPSNPTSGHPRISSPMSAFSPD
RVSSPRSSVQAPRPTFSAKKAGIAPQTPKESTPAEVPSETSTPTRTRNLTGNPGGPATGS
WTSSLQTSPPPLTSSIRSVTSPVSFRNNSRCQSPMSTQNILFSTVTSTSTSRPSQTSTAT
FPRSPPWGSRCQSPVVSQSAIISPIPASQTSTSPSPLSPPWGVRCQSPATQNNKPSTGFS
FSSSKLPQSSTATSPHTPPWGSRCQSPVVNTQPYTSSSVPTSRPSKTNVSTPPWGSRCQS
PLVSQKVQSSSFLVSTSRPSQPSTVTSPVSPPWGSRSQSPSHFQTSFSLSTTKPLYTSSV
TSPVSLTKDSRCMSPTVNNLDSKANHRLLAKNIINAAKRKNSPSPGALSGHSLPISSLSY
DGQKPPVNLFQSRSLGAQSPTFTSPPPTPTQRICSPVRLYNTRSLTDSDASVESEDSGLR
SPGLHSYNTCPRGWGGSLRVKRSTISTDL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagaagggacatacgtctatcaggagaggggtgagctggagcccggggggc
ttgagaaaacctctccagttaactcaagacgtgcagacccgtgggacagactacaatgcg
tcatgggagaagacaggattcaacaaagaacacatgagccggaaaacaaatctgaccagg
agtgccagtttgtcagagaaggagctaaaggaggctcgcgtcaagagtcagatcattgct
gctcagctcaccgtcccttccaactccaagtccaggggtgttcagctctttaatcggcgt
aagcagagagtcaacgccttcacacttgagagctgtggagaaaggtcagaggaggacaga
gctgagaatgtgaaaacaaaccccccatccaacaaactgacatgggcagagaggagcagt
gaggaaaaggacagagacctaaacttaaagaacacgaccgctgacaagtcggtcttctcg
acacctgcaagagtacgctcagtgggcgatatcatggatgagccggctaaggatttccac
aaagaagaagacactgatgaccgtgttgtacaagagagacacttcctccctgtcaaggag
gagcaagaggaagaggcacgacatcaatttcacgaggatctagaggatgaggccgagcgt
gagactccgccagggagtaaaaccactgatgtgatagtgtcagtacatgctgaaggagaa
gcagagataaatgggaggcaaacagggccagatcctgctggaaagcttcctaatggctgt
catggcgcctctggtcctgagaaggtgtctgtgcccacatctaagcaggcaagctccttc
atcaatagaactgccagacctttcttttctccgcccacggtgcagtctccggagaccgtc
aggcctgtcatggacatcccccctcctccttcctactcgacacctcctctccctgctttt
actgtcccccagcctgtggtggcctcacctccccctccgcctccgtcatatcccacacca
cctctacctgcttttaaaaaccagcccccacagacttactactccagtccacctccaatg
tctcctgtcatatctccttcttctcctccaccatcccatttctctgcttcccagtattca
caattgccccattatggcccccccacagccccgaaaccctccacttttgttcctaagcca
tcaggggagagggagatgacaaccccaatcaaaacaggaatacttgaggagggtgctgcc
aggagggcaaataaaaagtcaatgttcacattcaaagagaaaccggtggtcgctccaaac
cccgagctactttctctagtgcaaggggcagatgaaagaaagaagcatggacacaaatct
gtccctgagccaggatctgaagaagagttactggctctgggtgcagaagcctccaacttc
ctcgccaaggaagaggacaggacagagggagcaagagctccagaatgggcctcttgtctc
aagagctcaaggacccgaccgagggcagagcaccaaccggagcagtcgcttacaaatgtg
tccggaaaaggtgctcagctgtttgctaagcgtcagtccaggatggaaaaatatgtggtt
gagaatcagaacgcaggccaaattagatctccttctcctacaatgtctctgccaccatct
tgggtttacccatcaaacatgcctggtagggtcaaagctattgctaaaaactctgacatg
tgtgctcaactttcacaaaatctcaaggcgcaacaagcagtcaagcagaaaccaatgaaa
aaacctccaccaccagaaccagttccagagccgccgcctttggaaaatggttgctccaag
atagagatggatctgtcgaggcaccggccataccagcttaactcttctctcttcatcatt
aacccagtcaaggaccccatcagtaccctacccaaaggagcaccacaggccaggaaccag
ctcgccactccaactttctccagacagacttcactccctaacaatcctccctttaacttc
agtgcccagtgcatgtctcatcaaatacctctcagccctacaggaggaccagattatcct
tcaaatccgacatctggtcatccgaggatcagctctccgatgtctgctttttctccagac
agggtgtcctctccccggtcatcagtacaggcaccaaggcccacattttctgccaaaaag
gcagggattgcaccgcagacaccaaaggagtccactcctgctgaagttcccagtgagaca
tctacaccgaccaggacacgtaacctcacaggcaacccgggcggcccagctactggaagc
tggacttctagcctccaaacaagcccaccacccctcacaagctccatccgttcagtcacg
tcccctgtatcgtttcgtaataattcaagatgccaatcgcctatgagcactcagaatatc
ctgttttctacagttacctccacttccacatccagaccctcacaaacatctacagccacc
tttccacgctctcctccttggggttcaagatgtcagtccccagtggtcagccagtccgct
atcatttccccaattcctgcttcccaaacttctacatctccttctcccctttctcctcct
tggggtgtaaggtgccaatccccagcgacccagaacaacaagccctccactggtttctca
ttttcttcatctaaacttccccaatcatctacagcaacttcaccacacacacctccctgg
ggatctagatgccaatccccagtggtgaatacccagccttacactagctcctcagttcct
acgtccagaccttccaaaacaaatgtatccacccctccttggggatcaagatgccaatca
ccattagtaagccaaaaggtccagtcctctagcttcttagtttccacatccagaccatcc
cagccatctacagtcacatctcctgtgtctcctccatggggctcacgttctcagtctcct
tcacactttcaaaccagtttctctctctctaccactaaacctctttacacatcctccgtc
acctctcctgtttccttgaccaaagacagtcgctgcatgtctcccacagttaacaacttg
gactctaaagccaaccatcgcctgctggccaaaaatatcatcaatgcagccaaacgtaaa
aacagcccttctcctggtgcactaagtggtcacagtcttcccatctcatcactgagctac
gacggtcagaaaccacccgtcaacctcttccagtcacggtcactgggggcacagtcccct
actttcaccagccctcccccaactccaactcagagaatctgttctcctgtgcgtctctac
aacactcgctccctgaccgactccgacgcatctgttgaatccgaagactcaggcctccgc
tcgcccggcctccactcctacaacacttgtccccgcggctggggcggcagcctgagggtg
aaacgaagtaccatctccactgacctgtga
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integrated database retrieval system
