Maylandia zebra (zebra mbuna): 101477334
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Entry
101477334 CDS
T02814
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101477334 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mze04990
]
101477334 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
mze04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
101477334 (fgd1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
FYVE_2
PH_11
PH_13
zf-RING_5
PH_16
Motif
Other DBs
NCBI-GeneID:
101477334
NCBI-ProteinID:
XP_004568217
UniProt:
A0A3P9DNQ1
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Position
LG20:25984006..26024746
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AA seq
1076 aa
AA seq
DB search
MCVRVRGSDPVSSAAVDRESRSLPAPTFSLMTGFVFCCAMYMDRSSLTRGPSSSSSPSLL
TKSLSLEPSCSPCGHLGALDADSSQQPSSDPGPSSDPGPSSSTSGPASLEGGAELAERRG
SANGLLLVNDTGPPELPATTITPPSKSRPPLPGPKPQVPPKPPHLQQQTGVSRPRPRAPE
KPLPPTPPCKPLPADPRAGRPPPIRADGTASPTCVLSLIEKFEREQIIVVPDITGGALCP
RLSDPPSSLSSSRPSSPASSLAPPLPEEEPSCELTSHDDITQGDEGGPEGEDEGGVGDLP
DEEDDNNGDDVDDDEDDDDDEELAAACRDDHHHKRLSMESGYSPSEKHVEDDVVAVEMRE
QQLQPALLDQSELPSERLSLPSSQTDGKLANRDSGIDSISSPSHSEELCFAGVDDAGVAY
QCSPALLPRLSSSSSYAGEGGEGEGEEGDPRAGARRRREFSEEGDSDLEEEEAELTLVLA
PPKTDRQDSAEMSVQQRVFNIANELLHTEIAYVSKLHLLDQVFCARLLEEARSRSSFPCD
VVLGIFSNICSIYCFHQQFLLPALQKRMEEWDLNPRIGDILQKLAPFLKMYGEYVKNFDR
AMELVNIWMERSTQFKTIVQEIQREERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPE
DAPDYRDAQKSLELIATAAEHSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGH
ILKLSNKNGTTQDRYLILFNDRLLYCVPKLRLIGQKYSVRARIDVDGMELKETSSVAVAR
TFLVSGKQRSLELQARTEEEKKDWIQAIQATIQRHEQTMESFRHLNCSLRDDDSTPPHSP
SCAELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLSYDN
NRANRVCIDCYATLVGVSPSPAGLTSSSHRRRSILEKQASLAAENSVICSFLHHMEKGGG
RGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSVPLIGFEVSLPESCDRLERRHAFKISQS
HLTLYFSADGEELQRRWMDILSRAGRGEELQFHRPIVESLEEEGEEFAAVAEEENT
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgcgtgtgcgtggctctgacccggtttcttcggctgctgtggaccgggagagc
cgctctctccccgcaccaacattttctttaatgaccggatttgtgttttgctgcgcgatg
tacatggacagaagcagcctgaccaggggtccctcctcctcctccagtcccagcttgctg
actaagagcctctctctggagccgtcctgctcaccgtgcggccacctgggggcgctggat
gccgactcttcgcagcagccgagctctgacccggggccgagctctgacccggggccaagc
tcttccacatcaggtcccgcctccttggagggaggggcagagctagcagaacgccgtggc
tctgcgaatgggctcctgctggtgaatgacacggggccgccggagctgccagctaccaca
attacaccaccgagcaagagcaggccgccgctgccgggacctaaacctcaggtgccaccg
aaacccccccacctccagcagcagacaggggtttccaggccgcgcccccgagcaccagaa
aagcccctcccacctacacccccctgcaaacccctcccagcggaccctcgggcaggccga
cctccacctattcgtgcagacggcaccgcctcccccacctgtgtcttgtcactcatcgag
aagtttgagcgggaacagatcattgtggttcctgacatcaccggtggggcgctgtgtccc
cgcctctccgaccccccctcctctctgtcatcctcccgaccttcatcaccagcatcatca
ctagccccgcccctccctgaagaggagccgtcctgtgagctcacgagccacgacgacatc
acacagggggatgagggtgggcctgagggtgaggatgaggggggagtgggtgatctacct
gatgaggaagatgacaataatggcgatgacgttgatgacgatgaagacgacgatgatgat
gaagagctggcggctgcttgccgggacgatcaccatcacaagcgtctgtccatggagtca
ggttacagcccctcagagaaacatgtagaggatgatgtggttgccgtggaaatgagggag
cagcagctgcagccagcactgcttgaccaatcagagttgccctccgagcgtctgtccctc
ccctcctcgcagacggacggcaagctggccaatcgagacagcggcatcgacagcatcagc
tctccctcgcacagcgaggagctctgcttcgcgggtgtggatgatgcgggcgtggcctat
cagtgcagccccgcccttttgcccagactctccagctcatcctcgtatgctggggaggga
ggtgagggggagggggaagagggggacccgagggcaggtgcgaggcggaggagggagttt
tcagaggagggagacagcgacctggaggaggaggaggcggagctaactctggtgctggcc
cctcccaagacagaccgacaggactctgctgagatgtctgtccagcagagggtcttcaac
atcgccaatgagctgctgcacacagagattgcctacgtctcaaagctccacctgctggac
caggttttctgtgccagactcctggaggaggctcggtctcgctcctccttcccctgtgat
gtcgttctgggtatcttctccaacatctgctcaatctactgtttccaccagcagttcctg
ctgccggcgctgcagaaacgcatggaggagtgggacttaaacccgcggatcggtgacatc
ttacagaagctggcccccttcctgaagatgtacggcgagtacgtgaagaactttgaccga
gccatggagctggtgaacatctggatggagagatcgactcagttcaagaccatcgttcag
gagatacagagggaggagcgctgtgggaacctgactctgcagcaccacatgttggagccg
gttcagaggattcctcgctatgagctgctgctcaaagattacctccacaggctgccagag
gacgccccggactacagggacgcccagaagtctctggagctgatcgccacagcagccgaa
cactccaacgctgccatcaggaagatggagcgaatgaggaagctgttgaaggtgtacgag
ttgttgggaggagaagaagacattgttaacccaactaacgagctcattaaagagggacac
atcctcaagctgtccaataagaacgggaccacgcaggacagatacctgatactgttcaat
gacaggttactgtattgcgtcccgaagctgcgtctgattggtcagaagtacagcgtccga
gcccgaatcgacgtggacggcatggagctgaaggagacgagcagcgtcgctgtcgccagg
acgttcctggtgtcggggaaacagagatccctggagctgcaggccaggacggaggaggag
aagaaagactggatccaggccatccaggcgaccatccagaggcacgagcagacgatggag
agtttccgacacttgaactgttcactccgagatgatgactccacgccgcctcactctccg
agctgtgctgagctggggaaacgagctccgactcccatcagagagaaggaagtgactctg
tgtatgaagtgtcaggagccattcaactccattaccaagaggcgccaccactgcaaagcc
tgtggacacgtggtttgtgggaaatgctcggagttccgcgctcgcctgtcgtacgacaac
aaccgagccaaccgcgtttgcatcgactgctacgccacgctcgtgggcgtgtcgccgtct
cccgccgggctgaccagcagcagccacagaaggcgctccatcctggagaaacaggcctcg
ttggcagcagagaacagtgtgatttgtagttttctgcatcacatggagaaaggaggaggg
cggggctggcagaaagcctggttcgtcatccccgagaacgagccgctggtgctctacatc
tatggagctccacaggatgtgaaggcgcagcgcagcgtgcctctgattggcttcgaggtc
tctctgcccgagtcatgtgaccgcctggagcgacgccacgccttcaagatctcccagagc
cacctgaccctctacttcagcgccgacggggaagagctgcagcggcgatggatggacatc
ctgtccagggctgggaggggggaggagcttcagttccaccgaccaattgtggagagtctt
gaggaggagggggaggagtttgcagctgtggcagaggaagaaaacacgtga
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