Maylandia zebra (zebra mbuna): 101478079
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Entry
101478079 CDS
T02814
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101478079 (prpf39)
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101478079 (prpf39)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_MalT
TPR_16
TPR_10
TPR_12
Suf
PRIMA1
Motif
Other DBs
NCBI-GeneID:
101478079
NCBI-ProteinID:
XP_012772093
UniProt:
A0A3P9C1C9
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All DBs
Position
LG15:4390553..4397733
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AA seq
778 aa
AA seq
DB search
MLDTESPAMESNGDAFLPDLPVVGQATDWSVDQVAPEPLSNVLPEDSDVSQDAMGQEQQP
GQQMNSTDLGSVEKAVEQFQLANAQLFQEHPPPPPPPPPPPQPTEDAQQATEPVGSEPCS
QDMNIESESIGQTDSQDGTEATQVAEDGMELEDPSKETTEEAAVPTDPELPSEFEKLFKG
VEENPEDFNAWVYLLQYVEQENVLTAVRKAFDVFFLRYPYCYGYWKKYADIEKKHGNVQV
AEEVYRRGLQVIPLSVDLWIHYLTFIKENSDPNDPETEGRIRASYEHAVLAAGTDFRSDR
LWESFINWETEQQKLGNVTAIYDRILGIPTQLYSQHFQRFKDHVQTNHPRHFLSEEEFVQ
LRLELSKASLSGMVGDSGESQVAQEELPPGTEDLADPAKRVTEIENMRHKVIEVRQEVFN
HNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWKEYLEFEIENGTPERVVVLFERCLIA
CALYEEFWIKYAKYLEGYSTEGVRHVYKKACTVHLPKKPAIHLLWAAFEEQQGSIEEAQS
ILKSLEASIPGLAMVRLRRVSLERRHGNLEEAEALLREAMESAKNATETSFYAVKLARQL
MKVQRSLGKARKVLLDAIEKDQTSPKLYLNLLELEYNRDVTQNEAEILACFDRALNSPMP
LESRLLFAQRKVEFLEDFGSDINALVAAYEEQQKLQKENESTKRKAENGYDSSQEPDAKR
QRVDDGSGAVANMTDMQANASAYNYNWYQQQYGGWGQNSWGQYNQYAQYNQYYPPPST
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgctggatactgagtcccctgccatggagagcaatggggatgcctttcttccagacctt
cctgtcgtaggccaagcgactgactggtcagtagaccaggttgctccagagcctctctcc
aatgtcttgcctgaggattcagatgtgtctcaggatgccatgggacaagagcaacaaccg
ggtcagcaaatgaattccacagatctgggatctgtggagaaggctgtggaacaatttcaa
cttgccaatgctcagctcttccaagaacacccacctccaccaccgccacctcctccccct
ccacagcccacagaagatgcacagcaagcaacagaacctgtagggtctgagccttgcagc
caggacatgaatattgagtctgaatccattggacagactgacagtcaagatgggacagag
gctacacaggtggcagaggatggcatggagctagaagacccatccaaagaaacaacagaa
gaagcagctgttcctacagatcctgaactgccctcagagtttgaaaagctttttaaggga
gttgaggaaaacccagaagatttcaatgcgtgggtctatctgctgcagtatgtagaacaa
gagaatgtccttacagcagtgaggaaggcatttgatgtgtttttcctacgttacccctac
tgctatggctactggaagaagtatgcagatattgagaaaaagcatggcaatgtacaagtt
gcagaagaagtgtacagaagaggtttgcaggtcatccctctcagtgtcgacctgtggatc
cactatttgaccttcatcaaagagaattctgatcctaatgacccagagactgaggggcgc
attcgagcctcctatgagcatgcagtgcttgcagcaggcactgactttcgctcagaccgt
ttgtgggaatccttcataaactgggagacagagcagcagaagttgggtaacgtcaccgcc
atctatgaccgcatcttgggcattccaacccagctgtattcccagcacttccagaggttc
aaagaccatgtgcagactaatcaccccaggcacttcttgtcagaagaggagtttgtccag
ctaaggctcgagctctctaaagccagcctgtcgggaatggttggtgacagtggagagtca
caagttgctcaggaggagcttccacctggtacagaggatcttgcggatcctgctaagaga
gtgacggagattgagaacatgcgccacaaggtgattgaggtgcggcaggaagttttcaac
cacaatgaacacgaagtcagcaagcgctgggcctttgaagaagggattaagagaccgtac
ttccacgtcaaagccttggagaagactcaactgaacaactggaaggagtacttggagttc
gaaattgagaatgggactccggagcgtgtggtggttctcttcgaaagatgcctcatcgcc
tgcgctctctatgaggagttttggatcaagtatgcaaaatatctagagggatacagcact
gagggtgtgagacatgtctacaagaaggcgtgtaccgtccatctgcccaagaaaccagcc
atccacctgctgtgggcagcctttgaggagcagcagggcagcatagaggaggctcagagc
atcctgaagtccctggaggcatcgatcccaggtctcgccatggtgcgccttcggagggtc
agcctggagcgtcgccacggaaacttggaggaagctgaggcgctgttgagggaggcgatg
gagtctgcgaagaatgctactgagacatcgttctatgctgtgaagctggccaggcagctg
atgaaggtgcagaggagtctgggcaaggcgaggaaggtgcttctggatgctattgaaaaa
gaccagactagtccaaaactgtatctaaacctgcttgagctggaatacaatcgagatgtg
acccagaatgaggcagagatcttggcttgttttgaccgagccctgaatagcccaatgcct
cttgaatcacgactcctctttgcccagcgcaaagtcgagtttcttgaagactttggcagc
gatattaatgcccttgttgctgcctatgaagaacaacagaaactacaaaaagaaaatgaa
tcgacaaagaggaaggccgagaacgggtatgacagctctcaggaacctgatgctaagagg
cagcgtgtggatgacggctctggtgctgtagcaaacatgactgacatgcaggcaaatgcc
tctgcctacaactataactggtaccagcaacagtacggtggttggggacaaaactcctgg
gggcaatacaaccagtatgcccagtataaccagtactacccccctccttctacatga
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