Maylandia zebra (zebra mbuna): 101480146
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Entry
101480146 CDS
T02814
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101480146 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101480146 (cnot3)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101480146 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101480146 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
101480146
NCBI-ProteinID:
XP_012780440
UniProt:
A0A3P9CID8
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All DBs
Position
LG11:17913948..17924849
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AA seq
911 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEVYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPAVPTSSSLIGSFSSAVQQHQHQP
AQQQQQNSQPPNQSQQQQPPQTKPSVPSNNTPSPPSNPLLPTSTAPSLPTPNTSTSSAPN
PQSQSTSGPTSASSLGLGLGLGLSKVGMTGTSSANQMPGLGMGGHPTPLNTMAGLISGST
PAPYAQAAASGGLGLSSTTQSSISAESSTSIPTSGSSGVTTNGAGTGLGLLGSSPAHNSL
SANILGLVPGQSVAPGTSQVPPSSVSSTPGVVGMMGGNGGNVGVVGGVGVNSAPARPPSG
LKQNGSTSYSAVVAESSTESALSTPNQSQSSQPSSLSSSTSQPMDNGPSLISSITLPPSS
PSPSFSDSTPGGGSLLNGPHSFSQASEGLKAPEPLSSLKAMAERAALGSGLDGEISNLHI
TDRGRNDIFSGSSAAPGTPAAPQPSVTEVNIPPSLGVCPLGPTPLPKDQLYQQAMQESAW
THMPHPSDSERIRQYLMRNPCPTLPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTK
AQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTF
EYRYLEDRDLQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgaaatcgatagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagatatctggcagaagctccacaatgcagccaatgcaaatcag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaacttcagcgattgagagat
caaataaaaacatgggtggcctcaaacgagatcaaggacaaaaggcagctagttgagaac
cgcaaacttatagaaacgcaaatggagcggttcaaggtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttggggcttgctcagaaagtggatccagctcagagggaa
aaggaggaaacaggacagtggctaacaaatacaatagacactctaaatatgcaggtggat
cagtttgaaagtgaagtggaatctctttcagttcaaacaagaaagaagaagggtgataaa
gagaagcaagatcgtattgatgagctcaagcggttgattgagagacatcgattccacatt
cgaatgttggagaccattttacgaatgctggacaatgactccgtgccagtggatgcaatc
caaaagatcaaggatgatgttgaatattacattgactcctctcaagatccagactttgag
gaaaatgagttcctgtacgatgacttagatctggaagacatccctgcagcattagttgca
acttcaccatcgggccagggcaacgtggaagatgaggtgtatctccactctagtagcact
cccacttccaccacctcttcttcacccatccctccatccccagccacttgcactgctgag
aattcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaacggcaccccatccttgttatcctctttctcttcttccaccacctctgggtcc
tcctcatcctcctcccttgtgtccatggcgagtgttgtcggagggattcctgcagtgccc
actagcagcagtcttataggaagcttcagcagtgcggtgcagcaacatcagcatcaacct
gcacaacagcagcagcagaattctcagccgccaaaccagtcgcagcagcagcagccacct
cagacgaaaccctcagtcccttcaaacaacacccccagcccacccagcaacccacttctc
ccaacgtctactgccccctctcttcctacacccaacacatccacttcatcagctcccaat
cctcagtcacagtccacatctggacccacatcggcatccagtttgggacttgggctgggc
ctgggattgagcaaagttggcatgactgggacaagcagtgccaatcaaatgccagggcta
gggatgggtggccaccccactcctttaaacacaatggcagggctcatttcgggttcaaca
cctgccccctatgctcaggcagcagcatccggaggcttgggtttgagcagcaccactcag
tcaagcatttcagcagagagcagcacttccatacccacctctggctccagtggagtcacc
accaacggggcaggaacagggcttggtttgctgggttccagtccagcccacaactctctg
agtgcgaatattttgggtctggttcctgggcaaagtgtggcccctggtacctctcaggtt
cccccaagttctgtcagctctactccaggagtagttggcatgatgggaggcaacggagga
aacgttggtgtggttggaggagtaggagtgaattctgctcctgctagaccaccaagtgga
ctgaagcaaaatggaagcacaagttacagtgctgtggtggcggagagttccacagaatcg
gctctaagcacaccgaaccagtcacaaagcagccaaccctcatctctcagttcctcaacc
agtcagccgatggacaatggtcccagtttaatcagctccatcaccctgcctcccagttct
ccgtccccctcgttctcagacagcacaccgggtggagggagtcttctcaacgggccccac
tccttttcacaggcctctgaggggctaaaggcacctgagcctctcagctctctgaaggcg
atggcggagagagcagcgctgggatcaggcctggatggcgagatttccaacctgcatata
acggatagaggtcgaaacgatatcttctctggttcatctgcagcacctggcacacctgcc
gcgcctcagccgtccgtgacagaggtcaacatccccccatcgctcggtgtttgtccgctg
ggtccaacccctctccccaaagaccagctctaccagcaggcgatgcaggagtcggcatgg
acgcacatgccccacccctctgactctgagaggatcaggcaatacctgatgaggaatcca
tgtcccaccttgcccttccatcatcaggtcccacctcatcactctgactccatagagttc
taccagagactgtccacagaaactctcttcttcatcttctattacctggagggtaccaag
gctcagtatctgtctgcaaaggctctgaagaaacagtcctggaggtttcacaccaagtac
atgatgtggttccagaggcacgaggagcccaagaccatcaccgatgagtttgaacagggc
acttacatttactttgactacgagaaatggggccagagaaagaaggaggggttcaccttc
gagtacaggtacctggaagacagagacctgcagtga
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