Maylandia zebra (zebra mbuna): 101480828
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Entry
101480828 CDS
T02814
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101480828
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101480828
09142 Cell motility
04820 Cytoskeleton in muscle cells
101480828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
101480828
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101480828
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101480828
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101480828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101480828
NCBI-ProteinID:
XP_014264470
LinkDB
All DBs
Position
LG14:complement(36636141..36690299)
Genome browser
AA seq
1657 aa
AA seq
DB search
MLLTSCSDACGLNLLWCLLIVLKALPAALGGDLSEPCGGRDCSTCQCFPAKGARGAPGSL
GLRGPNGPMGFPGPQGPPGEKGQRGDEGPTGAAGLKGHMGSLGVPGFPGLDGVPGHPGPA
GGPGHPGLDGCNGTRGEKGKAGLLGEQGRDGELGFPGPKGYPGDQAVYFIRNPGVTGDAG
PSGHPGLWGEQGLSGSKGALGSPGPKGQDGVPGSPGSRGPPGERGRSLPGQKGDEGDQGL
QGPPGPFEYVDPPEDLYIKGDKGSRGVKGVCGIDGQLGLNGSPGMEGEKGILGLPGPRGL
PGQPGLRGNKGVKGIQGSSGLPGLIGRNGPKGERGDPGPPGNPREEDITYTGQVGDPGSP
GPHGLNGDRGRMGIPGPPGPPGRSIVGLPGVVGQKGVPGCKGVRGDPGQISTEKPTPGEP
GKPGRRGFRGHKGQQGVPGTYCLPGASGPRGDPGVLGPTGFQGSLGIKGSCGSCSCGLPL
VLRGAPGPKGDLGFPGFQGSSGPTGPRGEYGVPGDTGETGEQGRAGLPGVKGFKGQKGDL
TVEDIEGEKGNKGQRGPAGRQGFPGRRGQTGPSGVPGNPGFQGESFFSFPGERGLRGTTG
LKGYLGPPGPRGPDADGAVGERGLLGDPGPTGSCGPPGLKGVKGDPPPFRPIRPGAPGEK
GDPGSAGYTGSQGSPGFPGGIGSDGPKGDNGKDGLPGIPGKQGPQGVTGDYGDEGPEGFS
YDGDPGSPGLRGSAGLSGPTGDSAFGLPGSIGFPGTRGPQGPKGVPGDPGQHGLPGIGGL
HGCRGAKGQKGDDGAPGITGCSGPTSNRCDPGKPGTMGQSGFPGSIGAQGIFGDKGEIGS
VGSEGIGRKGSVGASGFPGVRGKPGCQGPPGLNGSSGLQGTGGPKGLTGPRGWEGVPGNP
GEPGVPGDPGMTGERGFNGRDGGQGIEGPKGQKGFQGPTGPPGPTNYIRIKGKTGDPGHP
STVGFTGPRGSKGMQGAAGKPGHPGCDGPPGIVGPPGPPGPCGKQGPAGLPGLKGFEGYC
GFPGSVGDPGDKGCSGKPGEPGPPGCKGPKGNKGESVGCPGPNGERGPRGDKGHLGPPGS
PGDPGGLGFTGAPGEKGSKGEKGHHGNIGPGGVIGPPGPRGQPGTPGIEGKSGGDGPPGH
EGYRGLKGPPGPLGLHGLDGLKGEKGATGTRGRGFPGVEGSLGPPGDKGPPGHQGLCGTS
QPGPPGYKGPVGTKGPPGKCGPPGKLGPDCKTPIKGPCGDPGCPGQDGEPGSLGEIGDPG
QNPPIRGDIGDNGNVGCQGPKGPRGCPGHIGTQGCTGYPGQKGMRGDSGLLGIPGPRGCK
GVPGHCGSPGLPGSPGDHGPKGEKGDTLDPELISPPKGPPGETGSTGQFGHPGLNGEQGP
CGPKGDKGDYGPQGCKGCDGAPGLKGDKGEPGLPGESGVVGQKGNRGPEGEKGSHGPTKE
LNLGLLVMHSQSANTPRCPGNMNTLWEGFSLLYLEGQERAHTQDLGQPGSCMRVFSTLPF
APCNKRTCSYASRNDKSYWLTTMEPVPREHVSGPSIQNYISRCVVCEAPSLPIAVHSQSR
QSVECPENWTELWDGYSFVMHTGAGDEGGGQPLTSSGSCLKAYKAQPFVECQGPRGTCHF
FANMYSFWLTTLTDPAMLTNDQEQRRSIAKCKVCMRL
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgacttcctgctctgatgcctgtggtctcaatctgctctggtgcctcctgatc
gtactcaaagccctgccagcagctctcgggggtgacctgtctgagccatgtggtgggcgg
gactgctccacctgtcagtgtttcccagccaagggagcaaggggtgctcctggttctctg
ggtctgcggggccctaatggacccatgggcttcccgggtcctcaggggcctccaggagag
aaaggccagagaggagatgaggggccaacaggagctgcaggcctgaaaggacatatggga
tctcttggtgttcctggttttccaggtttggatggagttccgggacacccgggacctgct
ggaggtccaggacatccaggtctggatggatgtaatggaactagaggagagaaagggaaa
gctggacttctgggagaacaaggacgtgacggagaactgggttttccaggaccgaaagga
tatccaggagatcaggcggtgtatttcatccgtaaccctggagtgactggagatgctggg
cccagtggacatcccggtctgtggggtgagcagggcctctcgggatcgaagggagcactg
ggttctccaggaccaaaaggccaagacggcgtacctggaagcccgggttctcgaggtcca
cccggggaaagaggtcgatctctgcctggacagaaaggagatgagggggatcagggtttg
cagggacctccggggccctttgagtatgttgaccctcccgaagacctctacatcaaagga
gacaaaggctcccggggggttaaaggagtctgtggaattgacggacagctgggtctgaat
gggtcacctgggatggaaggggagaaggggattttggggcttcctggaccaaggggactc
cctggacaacctggtctgcgtgggaacaaaggagttaagggaatccaaggaagctcagga
ctcccaggtctgattggacgaaatggtcctaagggcgaaaggggagatcccgggcctcca
ggcaacccccgggaggaagacatcacgtacaccggtcaagttggggatcccgggtcaccc
ggcccgcacggccttaatggagacagggggcggatgggaatacccggccccccaggaccg
cctggcagatcaatagttggactgccgggagttgtaggtcagaagggagttccaggatgc
aagggggtcagaggagatccaggtcagatctctacagagaaacccacacctggagaacct
ggaaaaccagggcgccgtggattcagaggacataaaggacagcaaggtgttccaggtacc
tactgtctccctggagcctcaggaccacgtggggacccaggtgtgctcggacccacgggg
tttcagggctcactgggaattaaaggtagttgtggcagctgttcttgtggccttcctctt
gtactaagaggtgcacctggccctaagggtgacttgggatttccaggcttccaaggatcc
tctggacccacaggtcctcggggagagtacggtgttcccggagacacaggagagactggt
gagcagggtcgggccggattgccgggtgtcaaaggctttaaaggacagaaaggagattta
acagtggaggatatcgaaggtgagaagggaaacaagggacagcggggccctgcaggcaga
caagggttcccaggaagaagaggacagactgggccctcaggggtccctggaaatcccggt
ttccagggggagagttttttcagcttccctggagaaaggggcctcagaggaactacaggg
ttaaagggatatttaggacctccaggtccccgaggaccagatgcagatggagctgtggga
gaacgtggactccttggggatccaggacctactggatcctgtggccccccggggttaaag
ggggttaaaggtgaccctccaccctttagacccataagaccaggtgcccctggagagaag
ggagaccctggaagtgcaggctacacaggttcccagggttctccaggttttcctggtggc
attgggtcagatggacctaaaggagacaatgggaaggatggacttcctggaatacctggg
aaacaaggacctcagggtgtcactggagattatggagatgaaggacctgaaggcttcagt
tatgatggagatccaggctctccgggacttcgaggctctgcaggtctcagcggaccaaca
ggagactctgcttttgggctcccaggctctattggctttccagggacacggggccctcaa
ggacccaaaggagtgcctggcgaccccggccaacatggtctaccaggcatcggtggtctc
catggatgtcgtggagcaaagggtcagaaaggagatgatggagcccccggtataactggc
tgctcaggacccacatcgaaccgatgtgatccaggaaaacctggtaccatgggccagtcg
ggctttccgggatctattggagcccaaggtatttttggggataaaggggagatcggcagc
gttggttctgaaggaattggccgcaaaggctctgtgggtgcatcaggatttccaggtgtc
cgtggaaagcctggttgtcagggcccccctggactcaatggaagctcgggacttcagggc
actggtggtccaaaaggtctgactggaccccggggctgggagggggtgcctgggaaccct
ggagagcctggtgtccccggagatccaggcatgactggagagagagggttcaacggacga
gatggtggtcaaggaatcgaagggccaaaaggacagaagggctttcaaggtccaacaggc
cctccaggaccaaccaactacatccgcattaaaggaaagacaggagacccaggacatccc
tccactgttggatttactggacctcgaggaagcaaaggtatgcagggagcagcaggcaag
ccagggcatccagggtgcgacggacccccgggcattgtaggaccccccgggccccctgga
ccctgtggcaaacaggggcctgcgggactcccgggactgaaggggtttgaaggatactgt
ggctttcccggaagcgttggagatccaggtgacaaaggatgctcagggaaacctggtgag
cctggtcccccaggatgtaaaggtcccaaaggtaataaaggggagtctgttggttgccct
ggtccaaatggagaaagggggcctcgtggagacaaggggcacctaggacctcctggatct
cctggagatccgggagggttgggttttactggggctccaggagagaaaggatccaaagga
gagaaaggacaccatggaaacatcggtcctggaggtgtgattgggcccccaggtcccagg
ggtcaaccaggtactccaggtattgaaggtaaaagtgggggtgatggtcctccaggacac
gaaggctaccgaggactcaaaggtcctcctggaccgctgggacttcatggactggacgga
ctgaaaggagagaagggggccactgggaccagaggtcggggctttccaggtgttgaaggt
tccttgggtccaccaggagataaaggtcctccagggcatcaaggtctttgcggcacatct
caacctggaccaccaggatacaaaggccccgtcggaaccaaagggcctccaggtaaatgt
ggacctccaggtaaacttggaccagactgcaaaactcctatcaaagggccctgtggagat
cctggctgtccaggccaagatggagagccagggagtcttggtgagatcggggatcctggt
caaaaccctccaattcgtggggatattggggacaatggtaacgtgggatgccaagggcca
aagggaccaagaggatgcccaggacatataggaacacaaggttgcactggatacccagga
cagaaaggtatgagaggcgatagtggtttgttgggaatacctggccctcgaggttgtaag
ggtgttcctggtcactgtggatctccaggacttcctggatctcctggagatcatggacca
aaaggggaaaagggtgacaccttagatcctgaactcatatcacctccaaagggtcctcct
ggagaaactggctcaactggtcaatttggacatcctggcctgaatggagaacaaggccca
tgtggtcctaaaggtgataagggagattatggacctcagggatgtaaaggctgcgatgga
gcccctggtctaaaaggagacaaaggagagccaggcctgccaggagagagtggagtagtg
ggacagaaaggtaaccgtggtccagaaggtgaaaagggttctcacggaccaaccaaagaa
ctgaacttgggcttgttggtgatgcacagtcaaagtgcaaacactcccaggtgtccaggc
aacatgaacaccctgtgggaaggattcagtctgctgtatctggaaggccaggagcgggca
cacactcaggacttgggtcagccggggtcatgcatgcgtgtcttttccaccttgcccttc
gctccatgtaacaagcgtacctgctcttacgccagtcgtaatgataaatcctattggcta
acgacgatggagcctgtcccacgtgaacacgtgagtggacccagcatccaaaactacatc
agccgctgtgtggtgtgtgaagccccatccctacccatcgcagtgcacagccagtccaga
cagtctgtggagtgtcccgaaaactggacagaactgtgggacggatactcctttgtcatg
catacaggcgcaggtgatgaaggtggcggccagcctctgacatcatcaggtagctgtctg
aaagcatacaaggcccagccgttcgtggagtgtcaggggcctcgtggaacctgccacttc
ttcgccaacatgtacagtttctggctgaccaccctgaccgacccggcgatgctgaccaat
gaccaagagcagaggaggagcattgcaaagtgcaaagtctgcatgaggctgtga
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integrated database retrieval system
