Maylandia zebra (zebra mbuna): 101481263
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Entry
101481263 CDS
T02814
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101481263 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101481263 (lig3)
Enzymes [BR:
mze01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101481263 (lig3)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101481263 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
101481263
NCBI-ProteinID:
XP_004551220
UniProt:
A0A3P9BZI9
LinkDB
All DBs
Position
LG10:26979654..26998861
Genome browser
AA seq
1012 aa
AA seq
DB search
MQKTLILLLQKTICVVLNPSGKLVRCQKHFRLCRAFSVYSCAERLPLSFHELHFTRKISA
LSSVSQKHSLLPNYPPWLFLHQSFSNQPDMADQRFLVEYAKRGTAGCKKCKDKIQKGIVR
IGKVVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDADKEIIN
KHVSDLMAKVNASPKKKVQAKLNTTGQLMAPPADPSVNAPRKFSGFTATKAGSSSSSPGA
SSSPAKASQGSALSTQLCDPQHKDCLFREFRKLCAMVAENNSYNTKTQIIEKFLRKGTSG
DKFHGDLYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFRSNQDDMVRDLEQGDVSETVRM
FFDESKSFPPAAKSLLTIQEVDASLTRLSQLTKEDEQQNELEDIAKKCTSNDLKCIVRLI
KHDLKMNAGAKHVLDAVDPNAYDAFKASRNLGDVIERVLKNQQEVSNGSGPKKLLTIEAS
LMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDNFSYFSRSLKPVLPH
KVAHFKEYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAKVCLFVFD
CIYFNGVSLMERPLCERRKFLHDNMVEVPNRILFSEMKHVTRAGDLADMITRVIREGLEG
LVLKDVKSTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCY
DPDAKKWCTVTKCSGGYDDAMLARLQKELDVIKISKEPSKIPSWLKIIKNYYPDFIIRDP
EKAPVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLKELYRISKENC
DFKVTAGPSTSNDDKGSSGGDSGGSSPSSSSNKGAPPKKTSSSTPPKAKAVKSQPRTPSS
DAPSAKKVKKSESVHSNGQTKAKATSQKLEPRNDKTLLDIFSGVKLFLPDSVQDFNKLRR
YFVAYDGDLVPDYDAASATHTLAEPEEQSQAQKVTPSWIWECIRKRRVVAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaactctcattttattgcttcaaaagactatctgcgtagtcctaaatcccagt
ggaaaacttgttagatgtcagaaacacttcaggttgtgtagggccttttctgtctattca
tgtgctgagcgtctacctttgtcttttcatgagttacattttacaaggaaaatctctgca
ttatcctcggtatcccaaaagcacagtcttctcccaaactatcctccctggcttttcctg
catcaaagtttctccaatcagccggatatggcagatcagaggtttctcgttgaatatgcc
aaacgtggcacagcaggatgtaagaaatgcaaggacaaaatccagaagggaatagtgcgc
ataggcaaagttgtgccaaaccctttcagtgagtctgcaggggagatgaaagagtggtac
catgtgaagtgtatattcgaaaagctggaaagagccagagccaccacgaagaagatcgag
gatatcaccgacctggagggctgggaggaattacaggatgctgacaaggagatcataaat
aaacacgtttcagacttgatggccaaagttaatgcaagtccaaaaaagaaggtgcaggcc
aagttgaacaccaccggtcagctgatggctccccccgctgacccatctgtcaatgcgcca
aggaagttttcaggcttcactgcaacaaaggctggcagttctagcagcagccctggggcg
tcctcttcccctgccaaagccagccaaggcagcgcgctgtccacccagctctgtgacccc
cagcacaaagactgcctcttcagagagtttcgcaagctctgtgccatggtggccgaaaac
aacagctacaatacaaagacgcagattattgaaaagttcctcaggaagggcacaagtgga
gataagttccacggcgatctttacctgactgtgaaattgctcctgccgggtgttgtgaaa
agcgtctacaacctcaatgacaagcagattgtaaaactcttcagccgcatattcaggagc
aaccaggatgacatggtgcgcgatctggagcagggtgacgtgtctgagacggtgaggatg
ttctttgatgagagtaaatcatttcccccagctgccaaaagtctccttaccatccaggaa
gtggacgcatccctgacccgactttcccagctgacgaaggaggatgagcagcagaacgag
ctggaggatattgccaaaaaatgcaccagtaatgacctgaaatgcatcgttcgcctaatt
aagcacgatttgaagatgaacgctggtgctaaacacgtcttggatgcagtggatccaaac
gcttacgatgccttcaaggcctcgcgtaatctgggagacgtgattgaaagggtgttaaag
aatcagcaggaggtgtccaatggttcaggacctaagaaactcctcactatcgaggcctca
cttatgacccccgtccagcccatgttggcggaggcgtgtaaatccatcgagtacgccatg
aagaaatgccccaacgggatgtactctgagatcaagtacgatggcgagcgcgtgcaggtc
cacaagaacggagacaacttcagctacttcagtcgcagcctcaaaccagtgctgcctcac
aaagtggcccatttcaaagaatacatccctcaggcttttcctggtggccacagcatgata
ctggatgctgaagtcctcctaattgacacaaagaccagtaaacccctgcccttcgggacc
ttgggtgtacacaagaaagcagcctttcaagacgccaaggtgtgcctttttgtttttgac
tgtatctacttcaatggtgtgagtctcatggagaggcctctgtgtgaacgcaggaagttc
ctgcatgacaacatggttgaagtccccaacaggatcctgttctcagagatgaagcacgtc
actagagcaggggatctggcggatatgataactcgtgtcatcagggagggacttgaaggt
ctggtgctaaaagacgtaaagagcacctatgagccggggaagcgccactggctgaaagta
aagaaggactatttgaatgaaggggcaatggcagacacagctgacctggtggtgctggga
gccttctacgggaaaggctcaaatgggggcatcatgtccagttttctaatgggctgttac
gacccagacgccaagaaatggtgcacagtcaccaagtgctccggaggctacgacgacgcc
atgttggccaggctccagaaagagctggatgtgatcaaaatcagcaaggagccaagcaaa
atccctagctggttgaaaatcatcaagaactattatcctgatttcattatccgcgatcct
gagaaagcacctgtgtgggagatcacaggcgcagagttttccaaatcggaaatgcacacc
gctgatggcatctccatccgcttcccccgcatgacgagaatccgcgatgacaaggactgg
aagagcgccaccaacttgcaccagcttaaagagctgtaccgcatatcgaaggagaactgc
gacttcaaagtgacagcaggtccgtctacatccaacgatgacaagggctcatcggggggg
gacagcggaggaagctcgccatcgtcctcctccaacaaaggcgctccgcccaagaagacg
agcagcagcactccacccaaagccaaggcagtgaaatcccagcctcgcactcccagctca
gacgcacccagtgctaagaaggtgaagaagagtgagagtgtccacagcaacggacaaact
aaagcaaaagctacctcacagaaactggagccaaggaatgacaagacactgctggacatc
ttcagcggcgtgaagcttttcctgcccgactcggtgcaggactttaacaagctgaggcga
tacttcgtggcgtacgacggggacctcgtgccagattacgacgcagcctccgccacgcac
actctggccgaacccgaagaacagagccaggctcagaaagtgacccccagctggatctgg
gaatgtatccgcaagaggcgtgtcgtagctccctgttaa
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