Maylandia zebra (zebra mbuna): 101482030
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Entry
101482030 CDS
T02814
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mze04990
]
101482030 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
mze04990
]
Other domain-containing proteins
Patched domain-containing proteins
101482030 (ptchd1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MCU
Motif
Other DBs
NCBI-GeneID:
101482030
NCBI-ProteinID:
XP_004551887
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All DBs
Position
LG9:13383545..13402884
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AA seq
982 aa
AA seq
DB search
MLGSAPGLSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVASHPVFFASAPVLLSIL
LGSSFSRYRVEEDVESLLAPKHSLAKIEGNLVDSLFPVNRSKHALYSDLQTPGRYGRVII
TTRKGSVMDPVHLDAILKLHRRIYQMQVTVPATGFNSFNYSFSNLCLLDDKNVCIIDDII
RAMEEIQSARNSNRSVPVLRYPITQLADGRQAYIGHQMGGVQGWGPGGAMRAQGMGVRGE
GVRSARALQLTYYLQAPGGLMDRVASQWEKAFCAELQHFAELHPKLGFYPSTSSSLRTDF
QFSSVLARRPLLASLGVCGVLVVLCCSMRDCVRSKPWLGLLALLSITLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTMI
HLMTLGLAASPLTNMEAVRLFCRTAALAVTISYVYMLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPDRLDSKPAWYRCLMYTRYQEETQVTNPPQGIGHTHTPNPDLTHTHTHPHPHTTN
NPAVRGHAHVANSTHPHPHPHPHSTASTDPHPQDSHLLLGCVRRCYGDWITNTYVKPFVV
LLYLVYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGFYIYESAP
YWNASVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTSQPRENFTRTLRHAFLREPQFAH
FADDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNP
SFVYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVVEPLVSVWLGLTLLSVQFGVLGFMTL
WGVELDCMSVLCLISALGHSADCSGPLLCGFAAGRGESRTRWVRVALERHGVPSLQTLIC
YGAALVPVGSIRSNLTRTLFRCLTLTAACSALHTLAFLPTLLTFLPPSKSRGHGPGGEGQ
RQEVECVEMNDSTRVVDQITTV
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagtgctccggggctttccggtcggtgggagaggctcgagccgcggccgcgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctcgttccacgcgctgggt
cggttcgtggcgagccacccggtcttcttcgcctccgcgcccgtgctcctctccatcttg
ctgggttccagctttagccggtaccgcgtggaagaggacgtggagagcctgctcgcgccc
aagcacagcctggccaagattgagggcaacctcgtggacagtctgttcccagtgaaccgc
tccaagcacgcgctctactctgacctgcagactccgggccgctatgggcgcgtgatcatc
accacccgaaaggggagcgtgatggatccggttcatctggacgccatactaaagctccac
agacggatctaccagatgcaggtaactgtgccagcaacaggcttcaacagtttcaactac
tccttctccaacctttgccttcttgatgacaagaatgtctgcatcatcgatgacatcatc
cgcgccatggaggagatccagtcagctcgcaactccaatcgctccgtgcccgtcctgagg
taccccatcacacagctggcagatgggcggcaagcatacattggccaccagatgggtggt
gtgcagggctggggtcctgggggggcgatgcgagctcagggaatgggagtgaggggagaa
ggtgtccgatctgccagggcgctgcagctcacctactacctccaagccccaggcggcctg
atggaccgggtggccagccagtgggaaaaggccttctgtgctgagttgcagcactttgca
gagttgcacccaaagttgggcttctacccttctacttcatcttctctgaggacagacttc
cagttctcctcagtgctggcacgtcgccccctgttggccagcctgggagtgtgtggggtg
cttgtcgtcctttgctgctccatgagggactgtgtgaggtccaaaccctggctgggactg
ctagctctgctgtccatcactctatcaggccttactgctgctgggatactcaacctgact
ggggccacctacaactccacgtacttggggatccctttcgtcatgcttggtcatgggctc
ttcggctccttcgagatgctgtcatcgtggagacgaacccgtgaggaccagcatgtgaaa
gagcgtgttgcaagcgtcttcgaggatgttatgttgcgtttctctggctccaccatgatc
cacctgatgaccttgggcctggccgcctccccgctcaccaacatggaagccgtccggctc
ttctgccgcactgctgctctggccgttaccatcagctatgtttacatgttgtccttctac
agttcctgtctggtgtttacaggctacctggagaccgggtacagacatggctgcttctgc
cggcgagtccccaaaccagaccgtctggactctaaaccggcttggtacaggtgtttaatg
tacactcgttaccaggaggagacccaagtgacgaatcctccacaagggattggtcacact
cacacaccaaaccctgaccttactcacacgcacacacaccctcacccgcatacaactaac
aaccccgctgttcgtggacatgctcatgttgctaactccactcacccacacccacaccct
cacccacattccacagcaagcacggaccctcatcctcaggactcccaccttttgttgggc
tgtgtgcgacgttgctatggagactggatcactaacacttatgttaaaccctttgtggtt
ctgctgtatctggtttacatctcttttggattgatgggattcctacaggtgacccagggt
tctgaccctagcgcactggttgcaatggacaccgcaacagtattgtacacccgagcccag
cagcgttacttcagctcatactctcctgtgattggattctacatttatgaaagtgcccct
tactggaatgcctcagtgcagcgggatctgctggaatatgccaaaggcttccagagaata
agctggctggaagcttacctgaactacctgtcagatcgcaaccagtccaccagccagccg
cgggaaaatttcacccgcacactgcgccacgcctttctccgtgagccgcagtttgctcac
tttgcagatgacattatatttgcagagcgcggccagggcgaagagcctgatgtggcagct
tctcgcatcttcttggttgccaaaacaacggagaacaagcgcgaagagatgtcagtgctg
ctggacacgctgcgacgcctgtcactgacctcacgagtccgcttcttaatcttcaaccct
tctttcgtctacctggaccgctatgctgcagcagtcagctccccacttagacactcactg
ctggcggtgcttttcctgttgggtctctcctctctggctgttgtggagcccctggtgtct
gtgtggctgggcctcacactgctctctgtccagtttggcgtcctgggcttcatgacctta
tggggtgtagagctggattgcatgtctgtgctatgtttgatttcagctttggggcactca
gcagactgcagcggccccctcctctgtggctttgctgcaggtcggggtgaaagcaggact
cgctgggtgagagtggcactggagagacacggtgttccctctttacagacgctcatctgt
tacggtgctgccctggtacccgttggctccatacgctccaacctcacacgcacactattt
cgctgcctcaccctgacggccgcttgctcggccctgcacacgttggctttcctgcccaca
ctcctcaccttcctgcccccctccaagagccggggccatggacctggaggggaaggacag
agacaggaggtggagtgtgttgaaatgaatgacagcaccagagttgtcgaccagatcacc
accgtctga
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