Maylandia zebra (zebra mbuna): 101484308
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Entry
101484308 CDS
T02814
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101484308 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101484308 (prpf38a)
Spliceosome [BR:
mze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101484308 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
101484308 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
101484308
NCBI-ProteinID:
XP_004569396
UniProt:
A0A3P9CNC1
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All DBs
Position
LG17:complement(11798133..11806468)
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AA seq
309 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRNGEFEVMHVDEFIDGLLHAERMCDVILPRLQKRQVLEEAEMLDPR
ISALEEDLDEVESSEEEDEEEDKMERIQTPEPHRRGYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagacgctaacagtatacacgggactaacccgcagtatctg
gtggagaaaatcatccgcacacgaatctacgagtctaagtactggaaggaggaatgcttc
ggtctcaccgctgagctggttgtcgacaaagccatggaacttaagtatgttggtggagtt
tttggtggaaatatcaaacccactcctttcctttgtctcacgctgaagatgttgcagatt
caacctgaaaaagacatcattgtcgaattcataaaaaacgaggatttcaaatatgtgcgt
ttacttggagcgatgtacatgaggttaactggaactgcagtggattgctacaaatacttg
gagcctttgtacaatgactacagaaagattaagagccagaacagaaatggagagtttgag
gtgatgcatgtggacgagttcatcgacgggcttcttcacgcagagagaatgtgtgacgtc
atccttcctcggcttcagaagaggcaagtgctggaggaggctgagatgctggacccaagg
attagcgctttggaggaggacttggatgaagtagaaagcagtgaagaagaagatgaggaa
gaagataagatggagagaattcagactcctgagccacatagacgtggttaccgtgacaat
gacagacctcgccgctccccatcaccacgttacagacgcagccgttctcccagacggagg
agcaggtctccaaagaggagaagcccctcaccacggagagatcgccatcgcagcaagagc
ccccggcgccaccgcagcaggtccagagagagacgccaccgctccaaatcaccaggtcac
cacagaagccacagacatcgcagccattccaagtccccagagaggagttcaaaaaagagt
cacaagaagagtcgaagaggaaacgagtga
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integrated database retrieval system
