Maylandia zebra (zebra mbuna): 101485006
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Entry
101485006 CDS
T02814
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mze01001
]
101485006 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mze04054
]
101485006 (ciita)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101485006 (ciita)
Protein kinases [BR:
mze01001
]
Serine/threonine kinases: Other
TAF1 family
101485006 (ciita)
Pattern recognition receptors [BR:
mze04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101485006 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
nSTAND3
LRR_8
AAA_22
AAA
TsaE
NB-ARC
Arf
Motif
Other DBs
NCBI-GeneID:
101485006
NCBI-ProteinID:
XP_004560849
LinkDB
All DBs
Position
LG4:complement(9657090..9677481)
Genome browser
AA seq
1643 aa
AA seq
DB search
MAHFEEVLDEVRSALTWASPAEIRALLEGLVEEQIISDAYSKSLGLHRFIDGLAQELLCG
ESGFIPGSDETDGEFASRASSTHQHLSHGPLIKVGKGGSQSPSVDYHLAGSEFVPSVDDH
YSTRLEPETCSLYEDQVISRDKLIQELREGTAMDEHYPTQRLYSVPTVFDGRLSLNDEIT
ELLTSAPSMQKLVSDSERVNQGNLEIEGEWLEQIEEAARRIAVPLWQHWDKGRRMLQPLV
YYNTTGCTTSDNTVTYSEAQCAILDLEEEMELAAACRTLDACTGNFNESFTLDAEDTPEE
FYYPLYDELATPGICIDRFKTFEEGGNASPVEACEATDSNNNVTDNMGGLLDAWWPGETA
DDLCCLPEDTQCGAGSALAQFTFQHLSPSFAPQDASVTAEDDMMAGVTGNVYGTAIWDID
GITGIKDTMESHCDVKMLEVDPNPIAVPLDLADLLIDNLDDDINEKLLDVDSLFDYLELN
DSPAEVPIANSIEQIQEPKAKGQSRRRKRPRDSQPQPCSDERPKAKQPKPSGQPKTKESQ
AEPAVEPGSHPASGPSPAKTLPMSTATPPRIFRVYPSQTSSAIPIQFITISDSAGNPVQL
SPPPPLIRFPLPRSATTPTYILVPTVSPPSKCQLPPLSPVDGTVAPVQMSSSPLGSLSET
ASKAMSPPCTSPVSPGNEMSPCKESPLPQSPKVLDIPQNVKDYIQEAKAHMSQTYQDMEA
GLSLSSHYVDVQVSQREVVRSGKNTNKCLDKELVIKGDTDRQKTMLALSQIFDGSNGEKS
RRYILLLGNAGMGKTTLIKKLCIDWSRNCIPQFDFVFLLDGKKLSVTEPVYSLQTLLLNL
SSSAPSCVDPEAVYAQILAAPKRVLIIFDGFDELRNYETLLQAQEKDLTASLQKDSKAKT
FTVRQLYSAILQRVLLPGCTLLLSTRPRGTASQLLRRTDSLLEMCGFTPANVETYLSQYF
SDPGLRESALESLKSMSYLNLLCWNPGLCRLVCLILEQSRSVDVLPRTLTGLCHQVLCLK
MDKDGRSTPTHTEAQAQSIRDTETQISNTSQAKKCSKNNQGKSRTQARTSSRTQRAKKAQ
EQEAQADKVDQDLRSSGGEAVTEDFDLLSQLSSLAWEGVKANSSILPTGRDISGKVKAFG
LRTGLFLSHQLRASPCLSNSTKEEGENETEAGETEQRTENSERTTNDLTDHQNDQILLWA
NPFLQSYIAGVHLALSRTLTDRSFLQTLPFQSGGKGRRRPQREELELTQRFAVGLLFHNR
TELQRFHTHTETAFRDMVANKQGLVTKHLEGLSYADLTPSQILEACHYVYEASFTHSDGG
REAGRTQLVTHLAANLPEFLTFHGVQLSPPDVFTVQKALEQGGTEGRRFCLDLEDSGIQI
CGLRALVSLNNINTYRSCIADAITLWELLEQSDEESLLQRAVSKFTIHPLKAKQVCHIEH
LEKLVNIHIHKRLSDSSSESHSILSEGVPAVKELHKLEFELGPDNGPLVLPKLWDLLPGL
HNLQHLDLENSKIGDKGAEKLASALVSLPSLEILNLSQNCIGDEGVKKLAATLKDLPNLH
CLSVYSNMISDEGAESLAAVLPHMASLTDLDVKFNKLTDVGAQSLGASLRNCTKVKTLRM
WNQCIPFGVLERLIQQDSRILLH
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctcattttgaggaggtcctggacgaagtccgctcggctctgacctgggcttcacct
gctgagatccgagctctgctggagggtctggtggaggagcagataatctcagatgcgtac
agcaagagcttgggtctgcatcgattcattgacgggcttgcgcaggagctgctttgcggg
gaatcagggtttataccgggatctgatgagaccgatggggaatttgcttctcgagcatct
agcacccaccagcatctcagccatggaccgctcattaaggtagggaaaggtgggtcacag
tctccctccgttgactaccacctggcaggatcagagtttgtcccatcagtggatgatcat
tacagcacaagactggagccagagacttgctcactatatgaggatcaagttatttccaga
gataaactcattcaggaattgagggaggggacagcaatggacgaacactaccccacacaa
aggctctactctgtccccacagtgtttgatggcagactttcattaaatgatgaaataact
gaactgctgacaagtgcaccttcaatgcagaagctggtaagtgatagtgaaagggtaaat
caggggaatttggagattgagggggagtggttagagcagattgaagaggctgctaggcgg
atagctgtacctctgtggcagcactgggacaaaggaaggaggatgttacagcctttagtt
tattataacacaactggatgtacaactagtgataacacagtgacatacagcgaagcacaa
tgtgctattttagatctggaagaggaaatggagcttgcagccgcttgcaggacactcgat
gcgtgcactggcaactttaacgaaagcttcacgctggatgctgaggacacacctgaggag
ttctattaccctttatatgatgagttggcgacacctggaatctgcattgatcgctttaaa
actttcgaagaaggaggaaatgcatcacctgtggaagcctgtgaagccacagactcaaac
aacaacgtcacagacaatatggggggcctcctggatgcgtggtggccaggtgaaactgca
gacgacctgtgttgtctgcctgaggacacacagtgtggcgcaggttcggcacttgcacaa
tttacctttcaacatttgagtccctcgtttgcaccacaagatgcttcagttacagcggaa
gatgacatgatggcaggggtcaccggaaatgtttatggaacagcaatctgggacatagat
ggaataacaggcataaaggacactatggagtcacactgtgatgtcaagatgctggaagtg
gatcccaatcccatcgcagtccctttggacttggcggatctgttgatagataatttggat
gatgatataaatgaaaaattgctggatgttgattccctctttgactacttagaactcaac
gacagcccagctgaggtacccatcgccaacagcattgagcagatacaggaacccaaagca
aaaggccaatcacgaaggagaaaaagaccaagagattctcagccacagccatgctcggat
gaaaggcccaaagcaaaacagccaaaaccatcaggtcaaccaaaaaccaaagagtcacag
gctgagccagctgttgagccaggcagtcatcccgcatcagggccaagtccagcaaagact
ttaccgatgtccaccgccactccaccaagaatttttcgcgtttacccttcccaaacaagc
tctgcgattcccattcagtttatcactatctcagattccgcaggaaatccagtccagctt
tctcctcctcctccgctcattaggtttccactcccccgcagcgccactacacctacatat
atattagttcctactgtgtcaccaccctctaaatgccaattaccaccactctccccagtc
gatggcacagtcgctccggtccaaatgagttcgtccccactgggttctctgtcagaaaca
gctagcaaagccatgtctcccccttgtacctcacctgtatccccaggcaatgaaatgtct
ccatgtaaggaatcacctcttcctcagtctcccaaggtccttgatattccacagaatgtc
aaggactacattcaagaagccaaagctcacatgagtcaaacctaccaggatatggaggcg
ggcctcagcctgtcttctcattatgtagatgttcaagtgagccaaagagaggtagttcgc
tctgggaaaaatacaaacaaatgcctggacaaggagctagtcatcaagggagacacagat
cggcaaaaaaccatgctggcactcagtcagatctttgatggttcaaatggagaaaaatcc
agacgttacattttgctgcttggcaatgccggcatgggaaaaaccactctgatcaagaag
ctgtgtattgattggtccagaaactgcatccctcagtttgactttgtattcctattggat
ggcaaaaagctcagtgtgacagagccggtctacagtcttcagacactcctgctcaacctc
tcctcctccgccccatcctgtgtggacccagaagcagtgtatgctcaaatcctggcagcc
cctaaacgtgtgctcatcatttttgatggttttgatgaattgcgcaactatgaaactcta
cttcaagctcaggaaaaagacctaacagcttcactgcaaaaagacagcaaggcaaagact
ttcacagtaaggcagttgtattctgccattcttcaaagggtcctgcttccaggctgcact
cttctactctccacccggccacggggaactgccagccagctgctcaggcgtacagacagc
cttctggagatgtgtgggtttaccccagcaaatgtggaaacatatttgtcccagtacttc
tctgatcctggcctcagagaatcagctttggagagtctaaaaagcatgagctacctaaat
ctcctttgctggaaccccggactatgccggctggtgtgcttgattttagagcagtctaga
agtgtggatgtcctgccaagaactttaactgggctctgtcatcaggtgctgtgtttaaaa
atggataaagacggcaggagtactcccacacacaccgaagctcaagcacaatccataaga
gacactgagacacaaatttcaaatacctctcaggcgaagaaatgttcgaaaaataatcag
gggaagtccagaacgcaggcacgcacttcctctcgcacccaaagggcaaaaaaggcacaa
gaacaggaggcgcaagcagacaaagtggatcaggatctcaggagcagtggcggagaagct
gtaacggaggactttgacttgttgtcccagctgagctctttagcctgggaaggggtcaaa
gccaactcttccatccttcccacaggacgggacatatctggcaaagtcaaggcatttggt
ctgagaacaggcctctttctctctcatcagctgagagcgagtccatgcctctcaaatagt
accaaggaggaaggagaaaatgagacagaagctggagagacagaacagaggactgaaaac
agtgaaaggaccaccaatgatttaactgatcaccaaaatgaccagatcctcttatgggcc
aaccctttccttcagagttacattgcaggagtacatctggctttgtcaaggactttaaca
gaccggtcctttctccagaccctccctttccagtctggagggaaaggtcgtcggcgacct
caaagggaggaacttgagctcactcagcgatttgcagttggcctcttgttccacaatagg
acagaactgcagcgattccacacgcatacagagacagcctttagagatatggtggctaac
aagcaggggttggtaacaaaacacctggaagggctttcttacgctgaccttactccctcc
caaatcttggaggcatgccactacgtctacgaggcgagttttactcacagtgatggtggc
cgagaagctggcaggactcagctggtgacacacctagcagcaaatcttccagagttcctg
acgtttcatggagttcaactaagcccgccagatgtgttcactgttcagaaagcacttgaa
caggggggaactgaaggcagacgtttctgtttggacctggaggactctggcatccagatc
tgtggacttcgagctctggttagcctcaacaacatcaacacatacaggtcatgcattgct
gacgccatcaccctctgggagctgctggagcagagtgacgaagaaagtctcctccagagg
gcagtgtccaagttcacaatccatcctttgaaagctaaacaggtgtgtcatatagagcac
ctggaaaagctggtgaacatacacattcacaagaggctatcagacagctccagcgagtct
cactccatcctgtctgagggagtgccagcagttaaagagctacacaagctggagtttgaa
cttggtccagataatggtcctctggttcttccgaagctgtgggatctcctgccagggctg
cataacctacagcacttggacttagagaacagcaagatcggggacaaaggagcagagaag
ctggccagtgctttagtctcactcccttctttggagatacttaatctatcacagaactgc
ataggagacgagggtgtgaagaagttagcagccacactgaaggacctgcctaatctgcac
tgtttaagtgtctacagcaacatgatttctgatgaaggggcagagagtttagcagctgtt
ctcccacacatggcttccctcactgaccttgacgtaaagtttaacaaactaacagatgtc
ggcgcacagagcttaggagccagcctaagaaactgtacaaaagttaagactttaaggatg
tggaaccagtgcatccccttcggtgtgcttgagagactcattcagcaggacagccgcatc
ctattgcactaa
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integrated database retrieval system
