Maylandia zebra (zebra mbuna): 101486056
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Entry
101486056 CDS
T02814
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101486056 (rnf40)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101486056 (rnf40)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
101486056 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
Motif
Other DBs
NCBI-GeneID:
101486056
NCBI-ProteinID:
XP_012777633
UniProt:
A0A3P9BYM4
LinkDB
All DBs
Position
LG8:complement(8476787..8495182)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSGAGGGKRPPGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVRILRKRIEPDPPV
VSTPAPPSATIPDQTPMEEDGVNLALPSGVPPPPVPEAQNEGERPEQQQEECQEEEQQQP
PPPTGDDLLTPTEPQSDTKTDTSPPPPPLSENAKGFLSTLEQSSEEELTLHLQDRMQFSK
EAIACLVCVFDRLHSHISDMCKVVQAAGFEDDSQSDIINLNCTLLDENTRLRDLATLLQG
RHHKMSMEYNELVDKVTSSETKVTEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQLKS
GYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVRESEK
LKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIEH
MESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISS
LQNHNLQLKGDVQRYKRKLRETQLEINKLRCQSGDTGVLILEETTSDSIDVKKEEDEDQE
EEEERRRELERQRAREREREREREAERERERERERERQRSDELKRKDSDTLKMLRVELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKL
ADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLRE
KDDANFKLMSERIKSNQIYKLLKEEKEELADQVLAFKTQVDAQLLVVQKLEEKEGVLQST
LAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERE
SSNLKRAQEDLSRLRRKLEKQKKVEMYSDADEILQEEINQYKAKLRCPCCNTRDKETVLT
KCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtcccccaggcggggacagcccccctggcccacct
gaaaagaaaagcaagaaagaagagaagaccaccaccacgctaattgagccaatacgcata
gctggagtctcctctacggaggaaatggacatgaaggttctccagttcaagaataagaag
ctatgtgaacgcttggagcagagacaggcaatggaggatgagctgagagagaaaattgag
aagctggagaagagacaagccactgatgacactaccttgctgattgttaatcgctactgg
tcacaattggaagaaaacgtgcgcattctgcgcaaacgtattgagccagatcctccagtt
gtttctacccccgccccaccctcagcaaccatccccgatcaaacaccaatggaggaagat
ggtgtcaacctggctttgccttctggcgtgcctccccctcctgtgccagaggcccagaac
gagggtgagcggccagagcagcaacaagaggagtgtcaggaagaggagcagcagcagccc
cctcctcccactggagacgatttactgacaccaacagagccgcaatcggatacaaaaaca
gatacatcaccaccacctcctcccctgagtgaaaatgccaagggtttcttgtcgactctg
gagcagagcagtgaggaggaactaactctgcacctccaggaccgcatgcaattcagcaaa
gaagccatcgcctgcttggtctgcgtctttgataggctgcacagtcacatcagtgacatg
tgcaaggtggtccaagctgcaggatttgaagatgacagccagtctgacatcatcaatctg
aactgcactctgctggacgagaacactcgactgcgagacttagccactctcctgcaggga
agacaccataagatgtccatggagtataatgagctcgtggacaaggtgaccagctcagag
accaaggtgactgagatggagacaacggtggaggacctgcagtgggacattgagaaactg
cgcaatagggaacaaaagcttaacaaacacctagcagaggccatggagcagctcaagtca
ggatacagcagcactggcagctcaggtgggctggctggaggccagattacactgaacatt
caaaagtttgagagtctcaatgcagagctggagcacaaccaggagctggcaaatagtcgc
atggcagaattagaaaaactacaggtggagctccaggaggctgtgagggagagtgagaag
ctcaagatggacctgcgtaatattccagaggaggttgtgaaggaaacgttagagtacaaa
tgtctgcagtctcagttctccctcctgtacaacgagtctctaggagtgaaaacccagctg
gatgaggcacgggctctcctgctcacggcgaagaacgcccatctccgacagattgagcac
atggagagtgatgagctgtctcttcagaagaagctgcggactgaggtcatccagctggaa
gatactctggcccaggtgcgcaaagaatatgagatgctgcgtattgaatttgagcagaac
ctggcagccaacgagcaagcaggaccgatcaacagggagatgcgacatttgatcagcagc
ctccagaaccacaacctgcagttgaaaggcgacgtgcaacgctacaagaggaaattgcgg
gaaacgcagctggagatcaacaagttacgctgtcagagtggcgacactggagttctgatt
ttggaggagacgacgagcgacagcattgacgtgaaaaaggaggaggatgaagaccaggag
gaagaagaggagaggaggagggagctggagagacagcgagcccgagagagggagcgggag
agggagagggaggccgagcgagaacgagagagggagcgggagagggagaggcagcgcagc
gacgagctgaagaggaaagactcagacacactgaagatgctcagagtagaactcaagaaa
gcccaagagtcccagaaagagatgaaacttctgctggacatgtataagtcagcgccaaag
gagcaaagagataaagtgcagctgatggcggccgaacgcaaatctaaagctgaggtggat
gagctgaggatgcgagtgcgagagctcgaggagagggagaggaaggagagcaaaaaactg
gctgatgaagacgccctcaggaaaatacgagtggcagaagagaccattgagcacctgcag
aagaaactcgctgccactaaacaggaggaggaagccctgttgagtgagatggatgtaaca
ggccaggcctttgaagacatgcaggagcagaacagccggctgttgcagcagttgcgcgag
aaggacgatgccaattttaagctaatgagcgagcgaattaaatctaaccagatctacaag
ctgctgaaagaggagaaggaggagctggctgaccaagttcttgctttcaaaacccaggtg
gatgcccagctgctggttgtgcagaaattggaagaaaaagagggagtcctacagagcacc
ctggcagctctggaaaaggaactggctgtcagaacacaagcactagagctgaacaagagg
aaggcagtggaggccgcacagctggcagaggacctgaaggtgcagctggagcacacgcag
gccaagctgaaggagatccaagtctctgtggctgagaaccgcactgcccgggagagggag
agcagcaacctgaagcgagcacaggaggatctgtccaggctcagaaggaagctggagaaa
cagaagaaggtggagatgtactcggatgcagacgagattctgcaggaggagatcaatcag
tacaaggccaagctgcgttgcccctgttgtaacacccgagacaaggagacggtgctcacc
aagtgtttccacgttttctgctacgaatgtctgaagatgcgttatgacacccgacagagg
aagtgccccaagtgcaactgtgcgttcggagccaacgacttccaccgcatctacatcact
taa
DBGET
integrated database retrieval system
