Maylandia zebra (zebra mbuna): 101487704
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Entry
101487704 CDS
T02814
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X2
KO
K15172
transcription elongation factor SPT5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101487704 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101487704 (supt5h)
03019 Messenger RNA biogenesis [BR:
mze03019
]
101487704 (supt5h)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101487704 (supt5h)
RNA polymerase I system
101487704 (supt5h)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
101487704 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF150_C
DUF3912
Ribonuc_P_40
DUF6406
Motif
Other DBs
NCBI-GeneID:
101487704
NCBI-ProteinID:
XP_004565052
UniProt:
A0A3P9DF53
LinkDB
All DBs
Position
LG14:36545033..36562609
Genome browser
AA seq
1084 aa
AA seq
DB search
MSDSEDSDFSDNQSERSSDGEAEEVEENEEETGSPVGSDKVADEEGEDLEDEEEYDEEEE
EDDDDDRPRKKPRHGGFILDEADVDDEYEDEDQWEDGAEDMDILEKEEAEVSNIDHVVLD
EDHSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHYSGGSEELSDDITQQQLLPGVKD
PNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVK
AAIEGIGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYV
EPSQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSHDG
DFMIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGKERE
HNLQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHEVRKYFRMGDH
VKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWG
ELVQLDPQTVGVIVRLERETFQVLNMHGKVMTVRHQAVNRRKDNRFAVALDSEQNSIHVK
DIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNF
TVGGFAPMSPRISSPVHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGGAKRPSGFTSTHVRTPIYGSQTPMYGV
GSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEDYDFGY
DDEPSPSPQAYGTTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQG
SYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSNIEQGGSDWVTTDILVRVKDSFMDLMGQTGVIRSVTGGMCSVFMQESEKV
VSVSSDHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLG
RLEH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcgaggacagcgacttctccgacaaccagagcgagcgcagcagcgatgga
gaggccgaggaagtggaggagaatgaggaggagacgggcagcccagtgggcagtgacaag
gtagcggatgaggagggggaggacctggaggatgaggaggagtacgacgaggaagaggag
gaggatgacgacgacgaccgtccgaggaagaagccgagacacggagggttcatcctggat
gaagctgatgtggacgatgagtacgaggacgaggatcagtgggaggacggagccgaggat
atggatattttggagaaagaggaggctgaagtgtcaaacatcgaccacgtggttctggat
gaggatcactctggatcccggcggctgcagaacctctggagagactccagggaggaggcg
ctgggcgagtactacatgaggaagtacgccaagtcgtccggaggggagcattactctgga
gggtccgaggagctttccgatgacatcacccagcagcagcttcttcctggagtcaaggac
cccaacctgtggacagtcaagtgcaagatcggagaggagagggcgaccgccatcgcactg
atgaggaagttcatcgcctaccagttcactgacacgcctctgcagatcaagtccgtggtg
gccccggatcacgtgaagggctacatctacgtggagtcgtacaagcagacgcacgtcaag
gccgccatcgagggcatcggcaacctgaggatgggcttctggaaccagcagatggtcccc
atcaaggagatgacggacgtgctgaaggtcgtcaaggaggtcaccaacctgaagcccaag
tcgtgggtcaggctgaagcggggcctgtacaaggacgacatcgctcaggtggactacgtg
gagccgagccagaacaccatctccctgaagatgatccctcggatagacctggaccgcata
aaggccaagatgagcctgaaagactggtttgccaagaggaagaagttcaagaggcctcca
cagaggctgtttgatgctgagaagatcaggtctctgggaggagaggtcagccatgacgga
gacttcatgatctttgagggaaaccgttacagccgcaaaggattcctcttcaagagcttc
gccatgtccgctgtgatcacagacggagtgaagcccacgctgtcagagctggagaagttt
gaagaccagccggaaggaatcgacctggaggtggtcacagagtcgggtaaggagcgtgag
cacaacctgcaggccggcgacaacgtggaggtgtgtgagggcgagctgatcaacctgcag
ggaaagatcctcagcgtggacggcaacaagatcaccatcatgcccaagcacgaggacctg
aaggaccctctggagttcccggctcacgaggtgagaaaatatttccggatgggcgaccac
gtgaaggtgatcgccgggcgatacgagggcgacaccggcctcatcgtcagagtggaggag
aactttgtcatcctgttctccgacctcaccatgcacgagctgaaagtgctgcccagagac
ctgcagctctgctctgagaccgcgtccggcgtcgatgtaggcgggcagcacgaatggggc
gagctggtgcagctggacccgcagacggtcggcgttattgttcggctggagagggagaca
ttccaggtgctgaacatgcacgggaaggtgatgaccgtgcgccaccaggcggtgaaccgc
aggaaggacaaccgcttcgccgtggcgctggactcggagcagaacagcatccacgtgaag
gacatcgtcaaagtcatcgacgggccgcattctggccgggaaggcgagatccgtcacctg
ttccgaggcttcgctttcctccactgtaagaagctggttgagaacggaggaatgttcgtc
tgcaagaccagacacctggtgctggcgggcgggtccaagcccagagacgtgaccaacttc
acagtgggaggattcgcaccgatgagccctcgcatcagcagccccgtgcaccacggcgga
ggaggtgctcagcagagaggaggcggcggaggaggaatggggcggggccgaggacgcaga
gacaacgagctgattggtcagacggtccgtatctcccagggtccttacaaaggatacatt
ggtgtcgtgaaggatgcaaccgagtccacggccagggtggagctgcactccacctgtcag
accatctctgtggaccgacagcgattaaccaccgtcggtggagctaagaggcccagtggg
ttcacctccacccatgtacgtactcccatttacggctcccagactcccatgtatggcgtc
ggctccaggacaccgatgtatggatctcagactccgctgcacgacggaagccgtacgccc
cactatggatctcagaccccactgcatgatgggagcaggactccaggtcagagcggagcg
tgggatcccagcaaccccaacacaccgtccagaaatgaggaagactacgacttcggctac
gatgacgaaccctctccgtcccctcaggcctacgggacgacccccaaccctcagaccccg
ggttaccccgaggtcccctcgccacaagtcaaccctcagtacaaccctcagacacctggc
acgcccgcgatgtataacacagagcagtattctccatatgcggccccgtcccctcagggc
tcctaccagcccagccccagccctcagagctaccaccaggtggcgccctcacctgtcggc
taccagaatacgcactcaccagccagctaccaccccacgccgtcccccatggcttaccag
gcgagtcccagtccgagtcccgtgggctacagtcccatgacgcccggagcgccctctcct
ggaggctacaaccctcacaccccaggctccaacatcgagcagggcggcagcgactgggtg
accacagacatcctggtccgagtgaaggactcgttcatggacctgatggggcagaccggg
gtcatccgcagcgtcacgggagggatgtgctcggtgttcatgcaggagtctgagaaggtg
gtgagcgtcagcagcgatcacctggagccggtcacgcccaccaaaaacaacaaggtgaag
gtgattctcggagaggaccgcgaggccacggggatccttctgagcatcgacggagacgac
ggcatcgtgcgcatggagctggacgaccagctcaagattctcaacctgcggttcctgggc
cgcctcgagcactga
DBGET
integrated database retrieval system
