Maylandia zebra (zebra mbuna): 112429912
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Entry
112429912 CDS
T02814
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112429912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
112429912
NCBI-ProteinID:
XP_024656964
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
ARCVRVTDGARWMFVLFVSQHSCERVQKVKKTSMELLQLQPKDEELRTIVASPELLKPVT
PPTAWCRPRVPAAACGDGRLPSDLVVVNSAVEVSRGLGFHHEGELQISVDPSADCKVEVV
MNEPVTQRVGRLSPQVRVEQVVFDCSFLEDEVKYVHDGSPLLDEDVVMLRVYRFTSSDTQ
VETVILRVRVVDSGAGVVALGSAPLVVPQFYGLSNAINGSVLNIRAAPDLVCTVRLLTAD
TSVPAAGRLVREEDSTQRKGRQATLCPGNSPCLHDTTEVHFLKTSCHEFLSSALKYQHLS
PPXPEIDYXPVRVELREQASRALLESQAVWLPVLIHGAMQNQPPQATFMASFILEVDQFI
LTPLTTATLDAKDHETPQEKLVFNVTVPPAEGYITHLDDHTKPIRSFTWLDLHEMKVAYQ
PSNSSRGRRRNYEVEFQVIDGSYLTSPPIVVHVSIRTSETNAPRVSWNVGLDLLEGQSRP
ITWEQLQIVDSDNIDAVYLVAVDGPVHGRLSVRGGKAFMFRVRDLKEGTVVYHHSDSDST
RDHVVFRISDGRHSVRHKFPINILPKDDSPPFLINNVAVEVQEGGAVRLEEFMLLASDLD
SSDDYILYQIVSAPRAGHLVRRTSAHETGSPVASFLQRDLIQGQIFYQHSGDEQFEDAFD
FTLSDSHRPPNLSQTYTVVVHVFPVEDQVPVEVPGSVRSLTVKETEVVYITQAHLHFTDR
EHPDADLTYVITQPCFSPLHPGLMDAGRLFYTDSTNAMKKDHTAPVLKSFTQHAVNHMKV
AFMPPVEDIGPESLFVQFVFSVSDHHGDTVSGLIFNITVTPVDDQAPEAFTNLLRVEEGG
AAFVTEEHLLVRDRDSREEALRVEIRSTARHGRLELWGQALQQGGGFTLQELRGLGIRYI
HDDSETTEDVVGLKVSDGLNSVDVVLHVQVLPMNDEPPQLGARLQGGLSCEEGGRVQVMV
DYLSATDRDSDDSALTYMLARRPSRGELQRAGVTVDKFSQQDVLQGHIYYAHTGGEIGPE
PVFDTVTLIISDSEARGPDSCCHGEAPPPPVPLHGTLPVYDLNITVLPVNDKVPAVTLGE
SMLVVDEGSSICLCGGVLGASDPDSPPEQLVFHLETPPLHGFLENTQPMPGSEKSNAGVR
VESFTLKHLTSGFINYVQSEHKGVEPTVDQLSISVSDGLHRSAPVSFYIIIKPTNDETPS
LLLANFTVKEGGMRELIPSILDGFDLDAPPELLTFTVVQPPAHGSLINSIHGTEAGADLL
HRSLSVTSFTLQELRQGMRIVYMHDDTETLKDAVALRLTDGVHAVEGTVQVTVLLVNDEK
PRLLKNAGLQVDSGELRVISSVVLEAEDLDTPPEQVYYFLNVAPRFGKLQLKTTSGWNEL
TAGQNFTQGDVEMNRLWYQHTAATNAAGFKGHDSFRFTLSDLDNESPAQSFFISVHVMQK
GDIVVLSRPVHLREGQRVVLNTDILLASDSTGRPKELVYTVSDPPRHGLVHAVHRPGVPL
LSFTQLDVAAHRVCYTHDNSHDAEADSFSFVVTNGDSSRSSTLHFTIEHGDRIPPTLSRN
VGLRLQDGSTVTITSDQLQLTDPDTTTANLGYVITQLPQHGKLLLRGTPLPSPPRFSQTN
VDDLHLTYQHDPSSPAKIDGFYFMPSDGHNRGYLEFGQLREEPAVFDIQVDWVDRTPPTL
TTRGSPSTVVDLGGGRYGIFITSRELQASDPDSPTEELEFSISRPPLLGYLENAATGSYI
KGRFTQRDVDRRAVMFVLPADVEVTSDSFLFVLRDPAGNSALPQTLELSWSRVELSATCY
RTCETAGILQIRVQRNGRSADPAYVAIQVDEGSAKAGRDFTHSTASLIQFDPGVKVKTWN
IYLIDDGLEENHESFTVTLRNPQNAVLGPRSSATVEIIDPHRGSCDPDDLWVEDDQRPLP
PPPTPPPLPPQLPDPLQQEEEEEVPVINIEAELLWENQPHPPRGDVPNRHHLDYKEVEPR
DPEPHSNGYTPHSSHLNIQQHTGSSTGNTGSTVRLSAQRRPEDEQEKVWTFHSLTPLRLE
ELQPGDVEWSWSAHGRPLQELQVGDSPQMAHQAQKHQPELRQHKVGKSVSSSCPDGWTHH
RRRCYILSPSVASWASADRTCSLLFNSSLTDVHSRRDVSWLWRFAGKKPFWIGLSGGPGR
SSWADSRSLSSSRLRGRQ
NT seq
6539 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgtgtcagggtgactgacggcgcgcggtggatgtttgtgttgtttgtgtcac
agcattcctgtgagcgtgtgcagaaggtgaagaagacaagtatggagctcctgcagctgc
agcccaaagacgaggagttgaggacgatcgttgcttcacctgaactactgaaaccggtga
ccccgcccacagcatggtgccgtcctcgtgtccctgctgctgcttgcggtgacgggcgtt
tgccctcggacttggttgtggtgaactctgccgtggaggtcagcagagggctcggttttc
atcacgagggggagcttcagatcagcgtggacccgagcgccgactgtaaggtggaggtgg
tgatgaacgagcccgtgactcagagggtcgggaggctgagcccacaggtgagggtggaac
aggttgtgtttgactgcagcttcctggaggacgaggtgaagtatgtccacgacggcagcc
ctctgctggacgaggacgtggtgatgctcagagtctacaggttcacgtcctcggacacgc
aggtggagacggtgatcctgagggtccgggtggtggactctggtgcgggcgtggtggcac
tcggcagcgctccgctggtcgttccccagttctacggtttatccaacgccatcaacggct
ctgtgctgaatatcagggccgcgcctgaccttgtctgcaccgtcaggctgttgaccgcag
acaccagcgtccccgctgcgggtcggctggtgagggaggaagactccacgcagaggaagg
gtcgacaggcgacgctctgcccaggaaacagtccgtgtcttcacgacaccaccgaggtcc
acttcctcaaaaccagctgccatgaattcctgagctctgccctcaagtaccagcacctca
gcccgccgntcccggagatcgactacngtcccgtcagggtggagctgagagagcaggcga
gcagagcactgctggagtcacaggccgtgtggctgccggttttgatccacggggccatgc
agaaccagcccccgcaggctaccttcatggcctctttcatcctggaggtggaccagttca
tcctcaccccgctcaccactgccacgctggacgccaaggaccacgagactccgcaggaga
agctggtcttcaatgtgaccgtcccacccgccgagggctacatcacacacctggacgacc
acaccaagcccatccggtccttcacatggctggaccttcacgagatgaaagtggcctacc
agccatccaacagcagccgggggcgccgcaggaactatgaggtggagtttcaggtgatag
acggctcctatctgaccagcccacccatcgtggtccacgtctccatcaggacatcggaaa
cgaatgctccgagagtctcctggaacgtgggtctagacctgttggagggtcagtcccgac
caatcacctgggagcagctgcagatagtcgacagcgacaacattgacgccgtttacctgg
tggccgtggacggacccgtgcacgggcggctcagtgtcagaggcgggaaggcgtttatgt
tccgcgtgcgggacctgaaggagggcacagtcgtctaccaccactccgacagcgactcca
cccgcgaccacgtcgtcttccgcatcagcgacggtcgtcacagcgtccgccacaagttcc
ccatcaacatcctcccgaaggacgactctccgcccttcctcatcaacaacgtggcggtgg
aggtgcaggagggtggggccgtgcggctcgaggagttcatgctgctggcctccgacctcg
actccagcgacgactacatcctttatcagatagtctccgccccccgggccgggcacctgg
tcaggaggacatccgcccatgagacagggtcaccggtggccagcttcctgcagagggacc
tgatccagggtcagatcttctaccagcactcgggagatgagcagtttgaggatgccttcg
acttcacgctgtctgacagccaccggccgcccaacctgtcgcagacatacacggtggtgg
tgcacgtgttcccggtggaggaccaggtgccagtcgaagttcccggcagcgtccgctcgc
tgacagtgaaggagacggaggtggtttacatcacccaggctcaccttcacttcacagacc
gagagcacccagatgctgacctcacctatgtcattacacagccctgcttcagcccgctac
atcctggcctgatggatgcaggacgtctgttttacaccgacagcaccaacgccatgaaga
aggaccacacagcgcccgtgctgaagtccttcactcagcatgctgtgaaccacatgaagg
tggccttcatgccgccggtcgaggacattgggcccgagtcgctcttcgtccagttcgtct
tctcagtcagcgatcaccacggcgacaccgtctccggcctcatcttcaacatcacggtta
cccctgtcgatgaccaggcgccagaggctttcaccaacctgcttcgggtggaggagggcg
gcgcggccttcgtgacggaggagcacctcttggtccgggaccgggacagtcgagaggagg
cgctgagggtggagattcggagcacggctcgtcacggccggctggagctgtggggccaag
cgctgcagcagggaggcgggtttaccctgcaggaactgagagggctgggcatcaggtaca
tccacgatgactctgagaccactgaggatgtcgttggtctcaaggtgtcggacggtctga
actctgtggacgtcgtcctgcacgttcaggtgctgccgatgaacgacgagcctcctcagc
tgggcgcccgtctgcaaggggggctgagctgcgaggaaggggggcgtgtccaggtgatgg
tggactacctgtcggccaccgaccgggacagcgacgattccgcgctgacctacatgctcg
cccggagaccgagcaggggagagctgcagcgagccggcgtgactgtggacaagttctccc
agcaggacgtcctgcagggtcacatctactatgcccacacaggcggggagatcggacctg
agccggtgttcgacacggtcaccctcatcatctccgacagtgaggccagagggccggaca
gctgctgccacggggaggccccgccccctcctgttcctctccatggtacacttcctgttt
acgatctgaacatcacagttcttcctgtcaacgataaagtccctgctgtcactctgggcg
agtccatgctggtggtggatgaaggctcttctatctgtctgtgcgggggggtcctcggag
cgtcagacccagacagtccccctgagcagctcgtctttcacctggagactcctccccttc
acggcttcctggagaacacgcagccgatgcccggctccgaaaagagcaacgcgggagtgc
gagtcgaatccttcactctcaaacacctgacctctggcttcatcaactacgtgcaatcgg
agcacaaaggggtggagccaactgtcgaccagctgtccatcagtgtgagcgacgggctac
atcgctccgcccccgtctccttctacatcattatcaaaccaaccaatgacgaaacaccat
cgctgctgctcgccaacttcaccgtaaaagagggcgggatgagggagctaattccatcca
tactggatggttttgacttggacgccccacctgagctgctcaccttcactgtggtgcagc
cgccggctcacggcagcctgattaacagcatccacggcacggaggcgggagctgacctcc
tgcacaggagcctctctgtcacctctttcactctgcaggagctccgacaaggcatgagga
tcgtctacatgcacgatgacacagaaaccctgaaggacgccgtggctctgcggctgacag
atggtgtccatgcagtcgagggaacagttcaggtcaccgtgctgctggtcaacgacgaga
aaccacgactgctcaagaatgctggactgcaggtggactcaggtgagctcagggtgatct
ccagtgtggttctggaggctgaggacctggacacgcccccagaacaggtgtactacttcc
ttaatgttgctccgcggtttggaaaactgcagctgaagacgacgtcggggtggaacgagc
tgacggcgggtcagaacttcacacagggcgacgtggagatgaaccgactgtggtaccaac
acaccgccgccaccaacgcagccggctttaaaggtcacgacagcttccgcttcaccctca
gcgacctggacaacgagtctccggctcagagcttcttcatctctgtgcacgtgatgcaga
aaggggacatcgtggtgctgagcaggccagtgcacctgagggaggggcagcgtgtcgtcc
tgaacactgacatcctgctggcatcagactcgactggccggcccaaggagctggtctaca
cggtgtctgacccgccgcgtcacggcctcgtccacgccgtccaccggcctggagtcccgc
tactcagcttcacccagctggacgtggctgcgcaccgagtctgctacacccacgacaaca
gccatgatgccgaggctgactccttcagttttgttgttacaaacggtgactcgtctcgca
gctccaccctccacttcaccatcgagcatggtgaccgcatcccgcccaccctcagccgca
acgttggcctccggctgcaggatggctccacagtgaccatcacttcggaccagctgcagc
tcaccgaccccgacactaccaccgccaacctgggatacgtcatcacgcagctgccgcagc
acgggaagctgctgctgagaggcacgccgctaccctcgccgccccggttctcccagacga
acgtggacgacctccacctgacttaccaacacgacccgagcagccctgcgaagatcgacg
ggttctactttatgccgagcgacggacacaacaggggctacctggagtttgggcagctga
gggaggagcctgctgtgtttgacatacaggtggattgggtcgaccggacgcctcccactc
tgaccaccagggggagtcccagcaccgtggtggatctgggcggcggccgttacggaatct
tcatcaccagcagagagctgcaggcctcagaccctgacagccccacagaggagctcgagt
tctccatcagcagacctccactcttaggatacctggagaacgccgccacagggtcgtaca
tcaaaggtcgtttcacgcagcgtgacgtggatcggcgagccgtgatgttcgtcctccccg
ctgacgtggaagtgacgtctgacagcttcctgtttgtcctcagagatccggcaggaaaca
gcgcgttgcctcagacgctggagctgtcctggtctcgagtggagctgtcggcgacctgct
acagaacctgtgagacggccgggatacttcagatccgcgtgcagcgcaacgggaggagcg
ctgaccctgcctacgtcgccatccaggtggacgaaggatcagccaaagctggcagagatt
tcactcacagcactgcgagtctcatccagttcgatccaggtgtgaaggtgaaaacctgga
acatttacctgattgacgacggcctggaagaaaaccacgagagcttcacggtcacgctga
gaaacccccagaacgccgtcctgggaccaaggagctcggccaccgtggagatcatcgacc
cccaccgaggaagctgtgacccagacgacctgtgggtagaagatgatcagcgcccccttc
ctcctcctcctactcctccccctctccctcctcagctccctgatcctctgcagcaagagg
aggaagaggaggttccggtcatcaatatagaggcggagctgctgtgggagaaccagcctc
acccgccccgaggagacgtcccgaatcgacatcacctggactacaaagaggtggagccac
gagacccagagccccacagcaatggctacaccccccacagcagccacctaaacattcagc
agcacactggaagcagtactgggaacactgggagcacggtccgtctgtctgcacagagga
ggcctgaggacgagcaggagaaggtttggacgttccacagtctgactcctctccggctgg
aggagctgcaaccgggcgatgtcgagtggagctggtcagctcacggtcgtcccctgcagg
aactccaagttggagattctcctcagatggctcatcaagctcagaaacaccaacccgagc
tccgccagcacaaggtggggaagtctgtgagcagctcatgtcctgatggctggacgcacc
acaggagacgatgttacatcctcagcccgtccgtggcgagctgggccagcgccgacagaa
cctgctcgctgctgtttaacagcagcctgaccgacgtgcactccaggagagatgtgagct
ggttgtggaggtttgcagggaagaagccattttggatcggtctgtctggaggtccaggac
gctcatcgtgggctgacagtcgctcgctgtcttcctccagactgagggggcgccagtga
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