Nocardia arthritidis: F5544_13425 Help Entry F5544_13425       CDS       T06735                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism nah  Nocardia arthritidis Pathway nah03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:nah00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     F5544_13425  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nah03400]     F5544_13425 Enzymes [BR:nah01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      F5544_13425 DNA repair and recombination proteins [BR:nah03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      F5544_13425 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  QIS10574 UniProt:  A0A6G9YBP3 LinkDB All DBs Position complement(3079838..3080731) Genome browser AA seq 297 aa AA seqDB search MARIDVEVTHADRELFPDDGITKGELVDYYSDIAPVMLPHLRNRPLTLQRFPRGIGEQGF IQQDFADTMPDWMSRAEVGKQDGTVVHPVADRREALIWLANQDCITVHSWLSRQGRQPDR LVFDLDPSGDDFSAVRATARACADVLGDLGLAAFVQTTGSRGLHVVVPLRADADFDTVRE FARGVAQVVAADDPRHRTVEIRKNKRGDRVYIDVMRNAYAQTSVAPYAVRARPGAPVATP LHWAELDDRALRSDRYTIRDIAERLAEHRDPWADLSRHARSLTRPRQRLPRLRPDST NT seq 894 nt NT seq  +upstreamnt  +downstreamnt atggctcgcatcgatgtagaggtcacccatgccgaccgggagctcttccccgacgacggc atcactaagggcgaactcgtcgactactactccgacatcgcgccggtcatgctgccccac ctgcggaacaggccgctgaccctgcagcggtttccgcgaggcatcggcgaacagggcttc atccaacaggatttcgctgacacgatgccggactggatgagccgcgccgaagtcggcaag caggatggaaccgtcgtacatcccgtcgccgaccgccgcgaagcactcatctggctggcc aaccaggactgcatcaccgtgcacagctggctgtcccgacagggccgccaacccgatcgg ctggtgttcgacctcgacccctccggcgacgacttctccgcggtacgggcgaccgcccgc gcgtgcgccgacgttctcggcgatctcggcctggcggccttcgtccagaccaccggctca cggggactgcacgtcgtggtaccgctgcgggccgacgccgacttcgacaccgtgcgcgag ttcgcccgcggcgtcgcccaggtggtggccgccgacgatccgcggcatcggacagtggaa atccgcaagaacaagcgcggcgatcgcgtgtacatcgacgtcatgcgcaacgcctacgcg cagacctcggtcgccccgtacgcggtgcgagcccgccccggcgcaccggtggccacgcca ctgcactgggccgaactcgatgatcgcgcactgcgatccgatcgctacaccatccgcgac atcgccgagcgcctcgccgaacaccgcgacccctgggccgacctgtcccggcacgcgcgc tcactcacccgcccccgccagcgcctgcctcggctgcgccccgattcgacctga

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