Nocardia arthritidis: F5544_23130
Help
Entry
F5544_23130 CDS
T06735
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
nah
Nocardia arthritidis
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nah03019
]
F5544_23130 (hrpB)
Enzymes [BR:
nah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F5544_23130 (hrpB)
Messenger RNA biogenesis [BR:
nah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F5544_23130 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
RoxA-like_Cyt-c
AAA_19
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIS12487
UniProt:
A0A6G9YHF6
LinkDB
All DBs
Position
complement(5175730..5178168)
Genome browser
AA seq
812 aa
AA seq
DB search
MKLPEFPDLPVRGVLDHIVETVAGRGTAVLVAPPGTGKTTLVPLALAAGTAGRVLVAEPR
RLAARAAAGRMAALLGESVGETVGYSVRGDRRVGPGTRVEVVTSGLLVRRLQGDPELAGV
DVVVLDECHERHLDADLLLALLLDARAGLRPDLRVLATSATVAAERLSELLGGDRAAPVV
RVDGRTYPVDTTYVPPLPRERVEAQVARATRAAVAATEGDVLVFLPGAAEIRRTAALLAD
IDVDLVVLHGRLPAAEQDTALSPGPRRRVVLSTAVAESSLTVPGVRAVVDSGLARVPRID
RGRGLSGLATVRVSAAVAAQRAGRAGREAAGRVWRCWPEYEHSTLPAYPEPEIRTADLTR
LALELACWGTADGHGLGWWDAPPPSGLASGRDVLRALGAVSADGAVTERGRRMAEIGLHP
RLARALLDGARTVGARAAAEVVTVLDDETLTAGVDLAAGLRVLRRERPARWRREVERLAR
MVEASEGVDDPAFVVALAHPERLARRRGPGSASYLMAGGTAVTLPPGSGLGDAQWLAVGV
ATRDPGRSEGWIRLAAVADEQLARRAASNLLRTVDEVAWTDGDVIARRVERLGAIVLSEK
PIRDPDPELLSAALRHGLSSTGLGLLHWDSDAIALRQRLEFLHRVLGAPWPAVDDESLLA
AADTWLGPELAAARGRADLERIDAGQALRRLLPWPEAARLDDLAPERLPVPSGSRIRLDY
STDPPVLAVKVQEAFGWADAPRLADGRVPVVLHLLSPAQRPVAITADLASFWRTGWSQVR
ADLRGRYPKHAWPEDPTTVPAHRGTARNAGRG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcccgaatttcccgatctaccggtccgcggcgtcctcgatcatattgtcgag
acggtggccgggcgggggaccgcggtgctggtcgcgccgcccgggaccgggaagacgaca
ttggtgccgttggctttggcggcggggaccgccgggcgcgtgctggtggccgagccgcgg
cggttggcggctcgggcggcggccgggcggatggccgctctgctgggggaatcggtgggc
gagaccgtcgggtactcggtgcgcggcgatcggcgcgtggggccggggaccagggtcgag
gtcgtcacctccggattgctggtgcgccggttgcagggcgatcccgagttggcgggggtc
gatgtggttgtgctcgacgaatgtcatgaacggcacctggacgccgacctgctgctggcg
ctgctcctcgacgcaagggccggattgcggccggatctgcgggtgctcgccacatcggcg
accgttgcggccgaacggctttcggagttgttgggtggagatcgcgcggcgccggtggtg
cgggtggacgggcggacctatccggtggacacgacctacgttccgccgttgccacgtgag
cgggtcgaggcgcaggtggcgcgcgccacccgggccgcggtcgcggccaccgagggggat
gtgctggtcttcctccccggtgcggccgaaatccgccggacggcagcgcttctggccgat
atcgacgtggatctcgttgtgctgcatgggcgattgcccgccgccgagcaggacacggcg
ttatcgcccgggccgcggcggcgcgtggtgttgtcgacggccgtggcggaatccagtctg
acggtgcccggtgtacgagcggtcgtggattcggggctggctcgagtgccgcgcatcgat
cgcgggcggggattgtccgggcttgcgacagttcgagtttcggccgccgtggcggcgcag
cgcgcaggccgggctggacgagaggcggcggggcgggtgtggcgatgctggccggagtac
gagcacagcacgctacccgcctacccggagccggagatccggacggcggacctcacccgg
ttggcgttggagctggcgtgttggggcacggccgacggacatggtctcggctggtgggat
gccccgccgccgagtgggttggcgtccggccgggatgtgttgcgcgcgttgggggcagtc
agtgcggacggtgcggtcaccgagcgcgggcgccggatggccgaaatcgggttgcatccg
cggttggctcgggcgttgctcgacggggcccgcacggtcggtgcgcgggccgccgccgag
gtcgtcaccgtcctcgacgacgaaaccctcaccgccggagtcgatctcgcggccggtctg
cgggtgctgcggcgcgagcgcccggcccgctggcggcgcgaggtcgagcggctggcccgc
atggtcgaggcgtcggagggcgtcgacgatccggctttcgttgtcgcactggctcatccg
gagcggctggcgcgacggcgcggcccggggtcggcgagctatctcatggcgggcggtacc
gcggtgacgctgccgcccggctccgggctgggtgatgcgcagtggctggcggtcggcgtc
gcgacgcgagatccgggccggtccgaggggtggatccggttggccgcggtcgccgatgag
cagctggcccggcgggccgcgtcgaacctgctgcggaccgtcgacgaggtggcgtggacc
gatggcgatgtaatagctcggcgggtcgaacgactgggggcgatcgtattgtcggagaag
ccgattcgtgaccctgatcccgaattgctcagtgctgccctgcgtcacggcctgagctcg
acggggcttggcctgctgcattgggattcggacgcgatcgcattgcgccagcgcctcgaa
ttcctgcaccgcgtcctcggcgcgccgtggcccgcggtcgacgatgaatcgctactcgcc
gccgctgacacctggctcggccccgaattggccgccgcccgcggccgcgccgacctcgaa
cgcatcgatgccggacaggcgctgcgccgcctgctgccctggccggaggcggcgcgcttg
gacgatctggcgcccgaacgtttgccggtgccctccggcagccgcatccggctcgactac
tcgaccgatccgccggtgctcgcggtcaaggtgcaggaggcattcggctgggcggacgca
ccgcggctggccgatggccgggtccccgtggtactgcacctgctctcgcccgcccaacgc
cccgtcgcgatcaccgccgatctggcatccttctggcgcaccggttggtcccaggtccgt
gcggacctgcgcggccgctaccccaaacacgcctggccggaggacccgaccaccgtgccc
gctcaccgcggcaccgcccgcaacgcggggcgcggctag
DBGET
integrated database retrieval system
