Nocardiopsis akebiae: KGD83_14875
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Entry
KGD83_14875 CDS
T08903
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03030
DNA replication
nake03430
Mismatch repair
nake03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGD83_14875
03430 Mismatch repair
KGD83_14875
03440 Homologous recombination
KGD83_14875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nake03032
]
KGD83_14875
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_14875
Enzymes [BR:
nake01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGD83_14875
DNA replication proteins [BR:
nake03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGD83_14875
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGD83_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
QUX26682
LinkDB
All DBs
Position
3465632..3466639
Genome browser
AA seq
335 aa
AA seq
DB search
MSRTWTAIDFETANHDRGSACAVGLVRVRDGAVVDRYTTLIRPPRQVDFFSRHNIAVHGI
TAADVADAPSWEQAHARIVEFADGSPLVAHNAAFDMGVLRQACGHTGLPHPAWEYACTLA
LARRTWGGLPDHKLPTVCAHIGHRVTHHHRADADAEAAARIVIAAMERYGTPSLADLARA
ARTDLRRVEASAGSAVPAPVPAAAAPAQPALFAASAAAAAPEDRFGRWQRDAQTPLPEPS
PDADPTGPLYGRTVCVSGDLASMDKPEVWRRVAEAGGRPAKNVTKKTDVLVLGGHGGPGK
TAKHLRAETYRERGQRIDLVTEAELLALLGMTTRP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccggacctggaccgcgatcgacttcgagaccgccaaccacgaccgcggcagcgcg
tgcgcggtcggcctggtgcgggtgcgcgacggcgcggtcgtggaccggtacaccacgctg
atccggccgccgaggcaggtggacttcttctcccgccacaacatcgccgtgcacggcatc
accgcggccgacgtcgccgacgccccctcctgggaacaggcgcacgcgcgcatcgtggag
ttcgccgacggcagccccctggtggcgcacaacgccgccttcgacatgggggtgctgcgc
caggcctgcgggcacaccgggctgccccacccggcgtgggagtacgcgtgcacgctggcg
ctggcccggcgcacctggggcgggctgcccgaccacaagctgccgaccgtgtgcgcccac
atcgggcaccgggtgacgcaccaccaccgcgccgacgccgacgccgaggccgccgcgcgc
atcgtgatcgccgccatggagcgctacggcaccccgtcgctggccgatctggcccgtgcc
gcgcgcacggacctgcgccgggtggaggcctcggccgggagcgcggtacccgctccggtc
ccggccgccgccgcgcccgcccagcccgcgctgttcgccgcgtccgccgcagctgccgcg
cccgaggaccggttcggacggtggcagcgcgacgcccagacgccgctgcccgagccctcc
ccggacgccgatcccaccgggccgctgtacgggcgcaccgtgtgcgtctccggggacctg
gcgtccatggacaagcccgaggtgtggcggcgcgtggccgaggcgggcgggcggcccgcc
aagaatgtcaccaagaaaaccgacgtactcgtcctcgggggccacggcggccccggcaag
accgccaagcacctgcgggccgagacctaccgcgagcggggccagcgcatcgacctggtc
accgaggccgagctgctggccctgctggggatgaccacccgcccctga
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