Nocardiopsis alba: B005_3035
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Entry
B005_3035 CDS
T02218
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nal
Nocardiopsis alba
Pathway
nal00470
D-Amino acid metabolism
nal00550
Peptidoglycan biosynthesis
nal01100
Metabolic pathways
nal01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B005_3035 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B005_3035 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
B005_3035 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nal01011
]
B005_3035 (ddl)
Enzymes [BR:
nal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
B005_3035 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
nal01011
]
Precursor biosynthesis
Amino acid ligase
B005_3035 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
GARS_A
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AFR08262
UniProt:
J7LCN6
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All DBs
Position
3163003..3164127
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AA seq
374 aa
AA seq
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MSSEQRKIRIAVVFGGRSSEHEISCVTAGSVLSVIDPDRYEVVPVGITRTGNWVLASGDP
ENLRIDPATKALPSVSEDGLELALPFDTAGQLMTVSPSRGTERLAEVDVVLPLLHGPFGE
DGTIQGLFEMMGVRYAGAGVFSSAAAMDKVFMKAMLVGNGIPTSPYVAITARAWETERKK
VLDDIAELGTTVFVKPARAGSSVGISKVRDSGDADAVVAAVEAAREHDPKVLVEAQVVGR
EIECGVLESEDGGTPDVSFPAEVHVAEGFDFYDFEAKYLSTSGLTIPAEIPEEATARLRA
MAADVFEAMGCEGLARVDFFYTEDGEVLVNELNTMPGFTPSSAFPQMWEATGVDYATLVE
RMITTALRRSPGLR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgagcagcgcaagattcggatcgccgtcgtcttcggcggacgtagttccgaa
cacgagatctcctgcgtcaccgcgggcagcgtcctgtccgtcatcgaccccgaccgctat
gaggtcgtcccggtcgggatcacccgtaccggcaactgggtgctcgcgtcgggcgacccc
gagaacctgcgcatcgacccggccaccaaggcgctgccgagcgtctccgaggacggcctc
gagttggcgctgcccttcgacaccgccggacagctcatgaccgtgagcccgagccggggc
accgagcgcctggccgaggtggacgtggtcctgccgctgctgcacgggcccttcggtgag
gacggcaccatccaggggctgttcgagatgatgggcgtgcgctacgcgggagccggggtg
ttctccagcgccgccgccatggacaaggtgttcatgaaggccatgctggtcggcaacggc
atccccaccagcccctacgtcgccatcaccgcccgcgcctgggagaccgagcgcaagaag
gtgctggacgacatcgcggagctgggcacgacggtgttcgtcaagcccgcccgggcgggc
agcagcgtgggcatcagcaaggtgcgcgactccggtgacgccgacgcggtcgtcgccgcc
gtcgaggccgcccgcgagcacgacccgaaggtcctggtcgaggcgcaggtcgtcggccgt
gagatcgaatgcggagtcctggagtccgaggacggagggacccccgacgtctccttcccg
gccgaggtgcacgtggccgagggcttcgacttctacgacttcgaggccaagtacctgtcc
acgagcggtctgaccatccccgccgagattcctgaggaggccaccgcccgcctgcgcgcg
atggccgccgacgtcttcgaggcgatgggctgcgagggtctggcacgggtcgacttcttc
tacaccgaggacggcgaggtcctcgtcaacgagctcaacacgatgcccggcttcacgccg
tcgtcggccttcccgcagatgtgggaggccaccggcgtggactacgcgaccctggtcgag
cggatgatcaccaccgcgctgcgtcgctctcccgggctgcgctga
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