Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396748
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Entry
112396748 CDS
T08872
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04820
Cytoskeleton in muscle cells
nasi04926
Relaxin signaling pathway
nasi04933
AGE-RAGE signaling pathway in diabetic complications
nasi04974
Protein digestion and absorption
nasi05146
Amoebiasis
nasi05165
Human papillomavirus infection
nasi05200
Pathways in cancer
nasi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112396748 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112396748 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112396748 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112396748 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112396748 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
112396748 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112396748 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
112396748 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112396748 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
112396748 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112396748 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112396748 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112396748 (COL4A3)
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112396748 (COL4A3)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112396748 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112396748
NCBI-ProteinID:
XP_024596366
UniProt:
A0A341B470
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MRPGTAQRPPALLLLLQLVLLVAAPTAGKGCICKDKGQCFCDGTKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKVCQSGSPGLPGFTGPKGVRGTTGLPGFSGPPGLPGIPGHPGP
YGPVGLPGCNGSKGEQGFPGLRGTPGYPGIPGAVGLKGEKGAPAEGEGVALDGKGDPGLP
GAPGFQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDKVIGQKGERGMKGLTG
PPGPPGTVIVTLTGLVNRTDLKGEKGDQGAMGQSGRPGPSGPPGESYGSEKGAPGEPGPQ
GKPGKDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDAYQEKGDE
GIPGPPGPKGVPGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGAKGSKGERGPPGKSAVGL
PGSPGCPGSPGPTGLPGPPGPPGGIVLRRGPPGDGGPPGHTGSPGIPGVDGPKGEPGLLC
TQCPCVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGSPGSAGLPGFPGFPGDQGHPGL
KGEKGEASQPERQVGAPGDPGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPALSGEKGDQG
LPGDPGIPGSPGPAGPAGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGPKGEIGVLTPVPG
PPGPPGAPGRAGPQGPPGIPGSTGKCDLGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTK
GSPGCPGEMGKPGLPGKPGLPGVKGEPGLAMPGEPGAPGLPGERGNSGEKGESGLPGLPG
LPGIPGTGGLDGPRGDPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQGRRGETGP
KGDPGIPGLDRSGFPGEPGPPGMPGHRGEMGPPGTKGYPGNPGFLGPPGEKGMIGMMGVP
GNIGPPGPPGKPGTLGQRGSFGIPGVKGERGAPGAKGEQGDKGTPGPPGILRLVGDKGEP
GLKGLAGKPGEKGNRGIPGLPGFKGLQGPPGPPGSPDSRGDPGSIGNPGEPGPRGVPGSM
GNMGVPGTKGMKGTMGFPGLAGRPGLPGTHGPQGDKGEPGYSEGTRPGPPGPKGDPGLPG
DMGKKGGRGPPGTPGCSGPAAPEGVPGNPGSPGHPGKPGPDGDLGSKGIKGFPGSPGIKG
PPGPPGFPGNPGPAGERGNQGRDGIPGPAGEKGETGLLGALPGRRGKPGPQGAKGDRGAP
GLPGLPGRKGPVGDAGPRGPIGMTGPQGPPGFPGSIIPGQKGDRGPPGRRGNPGEPGPPG
PEGGPVEGIKGDKGFMGQPGPRGPPGTVGDMGPPGHPGVPGAPGLPGVRGDPGFYGFPGI
KGEKGNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPGMQGEPGP
PGLPGNPGPCGPRGKPGKDGLPGTPGPTGEKGNKGCKGEQGPPGSDGLPGLKGKPGDTGP
PARGTTMRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGTLGSCLQR
FTTMPFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCTVCEGPAI
AIAVHSQTTDIPSCPPGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIEC
HGRGTCNYYSNSYSFWLASLDPRRMFRKPIPSTVKAGELEKIISRCQVCMKRRH
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgggacggcgcagaggccgccggcgctgctgcttctgcttcagctggtgctc
ctggtggccgcgcccactgccggcaagggctgtatctgtaaagacaaaggccagtgcttc
tgtgatgggaccaaaggggagaagggggagaaaggctttcccggaccccctgggcctccc
ggccagaaaggatacccaggtccggaaggcctgcctggaccacagggacccaaggtatgc
cagtctggctctccaggacttccaggattcactggtcccaaaggcgtgaggggaacaact
ggattaccaggattttcaggtcctcctggacttccaggcatcccaggccatcctggaccg
tatggacctgtcggtttgccaggatgcaatggttctaagggtgagcaagggtttccagga
cttcgggggacaccaggctacccaggcatcccaggtgccgttggtttgaaaggagagaaa
ggggctcctgctgaaggagaaggtgtagcccttgatggaaaaggtgaccctgggttgcca
ggagctccaggattccagggtttgccaggccttccaggttttcctggacctattggtccc
cctggccctccaggattctttggctttccaggaaccatgggacctccaggacctaagggt
cacatgggcgataaagtgataggacaaaaaggagagcggggtatgaaaggattaacagga
ccgcccggaccaccaggaacagttatcgtgacactaaccggcctggttaacagaacggac
ctcaaaggggagaagggagaccagggagccatgggccagtctggacgccctggaccctca
gggccacctggagaatcttacggatcagaaaaaggtgctcctggagaaccaggcccgcag
ggaaagcctggaaaagatggtgcccccggtttccctggcactgagggagccaaaggcagc
aagggtttccctgggttaaggggcgaagatggcatcaaggggtggaaaggagacatgggc
cctccaggatttcgtggtccaacagaatattatgatgcataccaggaaaagggagatgaa
ggaattccaggcccaccagggcccaagggagttcctggcccacagggtcccagtggtccc
cctggagcccctggaagtcctgggtcatcaaggcctggcctccaaggagcccctggagta
ccaggagcaaaaggaagtaaaggcgagcgaggacccccaggaaagagcgcagtggggctt
cccgggtcccctggctgtcctggttcaccaggccctacagggttgccaggacctccagga
ccaccaggtggtattgttcttcgcagaggtccccctggagatggtggacctccaggccat
acagggtctccaggaatcccgggagtcgatgggcccaaaggggagccaggccttttgtgc
acacagtgtccttgtgtcccagggcctccaggccccccaggattgccggggttagatggc
gtaaaaggattcccaggaagacaaggggcagctggcattaaaggaatcccagggtcccca
ggaagcgctggtcttccaggatttccgggattcccgggtgatcagggtcatccgggactt
aaaggagaaaaaggtgaagcatctcagccagagagacaagtgggtgccccaggggatcca
ggcctccgaggacatcctggaagaaagggcttggatggaattcctggaactccgggagta
aaaggattaccaggacctaagggagaaccggccctgagtggggagaagggagaccagggt
cttccaggggatcctggcatccctgggtccccaggacctgcaggaccggctggaccatca
gactatggaccttggggagagcctggtccaaagggcacccaaggacttcctggagcccct
ggaccacctggagaagccggtcctaagggagaaatcggtgttttgacaccagttccaggg
cccccaggacctcctggagccccaggccgtgctggcccccaaggtccacctggtatccct
ggatccacaggaaaatgtgatctgggtcttcctgggcccgatggtgaaccaggaattcca
ggaatcggattccctgggcctcctggacctaagggagaccaaggttttccaggaacaaaa
ggatcaccaggctgtcctggagaaatgggaaagccagggttacctggaaagccaggcctc
ccaggagtcaagggagaaccagggctagccatgcctggagagccaggagcaccaggtttg
ccaggagaaagaggcaactctggggaaaagggagaaagtggactccctggacttccaggt
ctccctggaattccaggaactggagggcttgatggaccacgaggggatccagggcagcct
ggaccacctggagaaagaggccccccaggaaggtgcaaagaaagtctcagtggagctcaa
ggacttccaggcttaaatggattgaaagggcaacaaggcagaagaggcgaaacggggcca
aagggagacccaggtattccaggcttggataggtcaggatttcctggagaacctggacca
ccaggaatgccgggtcatcgaggggagatgggaccacctggtacaaaaggatatccagga
aatccgggatttttagggccaccaggtgaaaaaggaatgattgggatgatgggggttccc
ggaaacattggccctccggggcctcctgggaagccaggcaccctgggacagagggggagc
tttggaattccaggagtaaaaggcgagagaggagccccaggtgccaaaggggaacaagga
gataaaggaactccagggcctcctggaatattacgcttagtcggggacaaaggggaacca
ggactcaaaggacttgcagggaagcctggtgagaaaggaaacagaggcattccagggtta
ccaggtttcaaaggactccaagggccacctggaccaccaggatcaccagactccagagga
gatccaggcagcattgggaatcctggtgagccaggaccacgtggtgtgccaggaagcatg
ggaaacatgggggtgccaggtactaaaggaatgaagggaactatgggattcccaggtcta
gctggaagaccaggcctcccaggtactcatggtccccaaggagataagggagagccaggt
tattcagaaggtacaaggccaggaccaccaggaccaaagggagatccaggattgccaggt
gacatgggaaagaaaggaggtagagggccacctggcacacctggatgttcgggccctgct
gcaccagagggagttcctgggaatcccggaagccctggccacccaggaaagcccggtcct
gatggtgatttggggtctaaaggaatcaaaggtttccctggctctccaggaataaaaggc
cctccaggccctccaggattcccaggaaatcctggaccagcgggtgagagaggtaatcaa
ggacgtgatggaattcctggtccagctggagaaaaaggagaaacaggtttgctgggagca
cttccaggccgaagagggaaacctggtcctcaaggagccaaaggagacaggggagcccca
ggcttgccgggcctccctggcaggaaagggccagtgggagatgctgggcctcgagggccc
attggcatgacaggacctcaagggccaccaggctttcctggttcaatcatccctggccaa
aaaggagatcgaggtccacctggcagaagaggaaacccaggtgagcctggtccccctgga
cctgaagggggtcccgtagaaggcataaaaggagacaagggatttatgggccagcctggc
ccaagaggtccgcctggaactgtaggagacatggggccaccaggtcatccgggagtacca
ggtgccccaggtctgccaggggtcagaggtgatcctggattctatggatttccgggcata
aaaggggagaagggtaattcaggatttctgggaccaagtggacctccagggcgaattggg
ccaaaaggaccacctggtgtacgtggagaccctggcacagtgaagatcatctcccttcca
ggaagcccaggcccacctggcccagctggagaaccagggatgcaaggagaacctgggccc
ccggggctaccgggaaacccaggaccctgtgggccaagaggtaaaccaggcaaggatgga
ctaccaggaacccctggaccaactggagaaaaaggcaacaaaggttgtaaaggagagcaa
ggaccgcctggatccgatggcctgccaggcttgaaggggaaacctggagacactggacca
cctgcaagggggacaacgatgaggggctttgtcttcacccggcacagccagaccacagcg
attccctcctgtccagaagggacagaaccactctatagtgggttctctcttctctttgta
caaggaaatgaacaatcccatggacaggacctgggaactcttggcagctgcctgcagaga
tttactacaatgccattcttattctgcaatatcaatgatgtatgtaatttcgcatctcga
aacgattattcatactggctctcaacgccagctctgatgccagtggacatggctccaatt
actggccgggccctggagccttatattagcagatgcactgtctgtgaaggtcctgcaatt
gccatagctgttcacagccaaactactgatatcccctcatgtcctcctggctggatttct
ctctggaaaggattttctttcatcatgttcacaagtgcaggttcagagggcgctgggcag
gcactggcatcccccggctcctgcttagaagaattccgagccagtccatttatagaatgt
catggaagaggaacctgcaactactattcaaattcctacagtttctggttggcttcatta
gaccccagaaggatgttcagaaaacctattccgtcaactgtgaaagctggggagttagaa
aagatcataagtcgctgtcaggtgtgcatgaagaggagacattga
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integrated database retrieval system
