Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112410579
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Entry
112410579 CDS
T08872
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112410579 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112410579 (CHD8)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112410579 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112410579
NCBI-ProteinID:
XP_024617022
UniProt:
A0A341CQE0
LinkDB
All DBs
Position
Unknown
AA seq
2591 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPEETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAPPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVPSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQPPQQKIQIVPQPPSS
QPQPQQPSSAQPVALSSVQQAQIMGPGQGPGQRLSVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHMGGKTGIEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSVFDVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWI
RKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWF
PVVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEH
RVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQ
QPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARR
EKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVA
MCRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLAL
CQPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGA
PAPSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVA
RSRPTPQDYEMRVAPSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSS
SSTDESEDEKEEKLTADRSRSKLYDEESLLSLPMSQDGFANEDGEQMTPELLLLQERQRA
SEWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGSGNHLLDSPSLTPGEYGDS
PVPTPRSSSAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLM
ANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDA
PRRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRN
GKRGHHAETVFNRVMPGPIAPDSSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSS
SGLQSVSSLGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGL
RATGYPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMP
ANSDSSEDGDD
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctt
actgatgacagcttcaatcaggttacacaagaccctattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacttggtccccccaccagaggaaacagcccccacagaacttcccaaa
gaatcgacagctccagctccagaatctttaaccttgcatgattataccactcagcccgtc
agccaagagcagccagccccacctgtcttacagacaccgacgccaacgtcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgttccctccagtagtgctggagggcagccacctcagtcagcccctaagattgtt
atccttaaggccccacccagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctcgtggctggcacagccaatggtggaaaagtc
acttttaccaaagtgctaaccggcactccccttcgacctggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcacgctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcacgtcgtgctggggagtctgccaggcaagatagtgttacagggcaaccag
ctggcagccctgacgcaagccaagaatgcccaggggcagccggccaaagtagtgactatc
cagctgcaggtgcagccgccacagcagaagatccagattgtaccgcagcctccgtcgtcg
cagccacagccccagcagccatcctcagcccagccagtggctctttcctctgtgcagcag
gctcagataatgggaccagggcagggcccgggacagagactttcagtaccgctcaaggtg
gtgctgcagccccaggccggctcttcccaaggggcctcttctgggctctccgtagttaaa
gttctaagtgccagtgaagtggcagcgctgtcctcaccagcaagctctgctcctcatatg
gggggcaagacgggaatcgaggaaaaccgtaggctggagcaccagaagaagcaagagaaa
gcaaatcggattgtagcggaggccattgctagggcccgtgcccggggcgaacagaacata
cctcgagtcctgaatgaagatgagttgcctagcgttcggcctgaggaggaaggtgaaaag
aaacgcaggaagaagagcagtggggagaggctcaaggaagaaaagccaaagaagagcaaa
acatctggtacctccaaaaccaagggcaagagtaagctaaacaccatcactcctgtggtg
ggtaagaagagaaagcgaaatacctcatctgataattcagatgtggaagtcatgcctgca
caatcaccccgggaagatgaagaaagcagcattcagaagagacgctcaaaccgccaagtt
aaacggaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaa
gaagtagatgtaactggtccaatcaaaactgagcctatcctgcctgagccagtgcaggaa
ccagatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagccattgtagacaaagtgctttctatgcgtattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtgaagtacaagaactactcctatctacactgt
gagtgggctaccatctcccaactagagaaggataagaggatccatcaaaaactaaagcgc
ttcaaaaccaaaatggctcagatgagacacttcttccatgaggacgaagagcccttcaac
ccagactatgtagaggtggataggatattggatgagtctcacagcattgacaaggacaat
ggggagcctgtaatttactacttggtaaaatggtgctctctgccctatgaggatagtaca
tgggagctaaaagaggatgttgatgagggcaagattcgagaatttaaacggatccagtca
aggcacccagaactcaaaagggtgaatcgtccacaagcaagtgcctggaagaagttggag
ctgtcacatgagtataaaaacagaaaccaattaagggaatatcagttggaaggggtcaat
tggctgctctttaattggtataacaggcagaactgcatcctggctgatgagatgggattg
ggcaaaaccattcagtccattgccttcttacaggaggtatataatgtgggcatccatggc
cccttcctggtcattgccccactgtccacaattactaactgggagagagaattcaacacg
tggacagagatgaacactattgtgtaccatggcagtctggccagccggcagatgattcaa
cagtatgaaatgtactgtaaagattcacgggggcgcctcatcccgggtgcatacaagttt
gatgccctgatcaccacttttgagatgattttgtcagactgtcccgagcttcgtgagatt
gaatggcgttgtgtcatcattgacgaagcccatcgactaaagaaccgtaattgcaagctg
cttgatagtctcaagcacatggacctggagcacaaagtgctactcacaggaacaccattg
caaaatacagtggaggaactgttcagcctgcttcatttcttggaaccttcacagtttccg
tcagaatcagagttcctcaaggactttggggatctcaagacagaggaacaggttcaaaag
ctacaggccattctcaagccaatgatgctgagaagactcaaagaggatgttgaaaagaac
ctggcacctaagcaggaaaccattattgaagtagagctgaccaacattcagaagaaatac
tatcgggctattttggagaagaatttctcctttctttccaaaggggcaggccatactaac
atgcctaatctactcaatacaatgatggagttgcgcaaatgctgcaaccacccatatctc
atcaatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatatcatacct
catgacttccacttgcaggcaatggttcgttcagctggcaaattggttcttattgacaag
ttacttccgaaacttaaagctggtggccataaggttctgatcttctcccagatggtacgc
tgcctagatatcctagaggattatctaatccagaggaggtacttgtatgagcgtatcgat
gggcgagttagaggcaaccttcggcaggctgctattgaccgcttcagcaagcctgactca
gaccgatttgtctttttgctatgcacccgggctggtggacttggaattaatctcacagct
gctgatacttgcatcatctttgattcagattggaatccgcaaaatgacctgcaggcccaa
gcacggtgtcatcgaattgggcagagtaaagctgtgaaggtgtaccgtctcatcactcgt
aattcttatgagagagagatgtttgataaggctagcctcaagttaggattggataaagct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccagcagttctccaag
aaggagattgaagatctcttacggaagggagcatatgcagccataatggaggaagatgat
gagggctccaagttttgtgaagaggacattgaccagatcttgttaagacgaaccactacc
atcaccattgaatccgaaggaaagggttctacgtttgctaaggcaagctttgtggcttct
gaaaataggactgatatttctctggatgaccccaacttttggcaaaagtgggccaaaaag
gctgacctggacatggatctactcaatagcaagaataacttggtgattgacacacctaga
gtacgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctct
gatttggaaagtgaagatgatgagcggccacgctctcgccgacatgaccgtcatcatacc
tatgggcgcactgactgctttcgggtggaaaagcatctcctggtatatggttggggacgg
tggcgagatattctgtctcatggacgcttcaagcgacggatgactgaaagagatgtggaa
acgatttgccgggccatccttgtgtactgtcttttacactatcgtggggatgaaaatatc
aaaggcttcatctgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcagtcttcgatgtatcccctttcccaggtctgtctatccccgtgccccgtgga
cgcaaggggaaaaaagtaaagtcacaaagcacttttgatatccataaggcagattggatc
cggaaatataaccctgatactctgttccaagatgagagttataagaagcacttgaaacat
cagtgtaacaaggtcctgttgcgggtacgaatgctgtactatctgagacaggaggttatt
ggagaccaggcagagaaggtgttagggggtgctattgccagtgagattgacatatggttc
ccagtagtggatcagctggaggttccaacaacatggtgggacagtgaggctgataagtcc
ctgctcattggagtctttaagcatggctatgaaaaatataatactatgagggcagaccca
gccttgtgcttcctggaaaaggctggccgaccagatgacaaagccattgcagcagaacat
cgagtgttggataatttttctgacatagtggaaggggttgactttgataaagattgtgaa
gatcctgaatataaaccactccagggtcccccaaaggatcaagatgatgagggtgatccc
ttgatgatgatggatgaggagatctcagttatagatggagatgaagcccaggtgacccaa
cagccaggccatctattctggcctccaggctctgctttgacagctaggcttcggcgccta
gtaacagcctatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacgt
ggggatcggagaaggcggcgttgtgaggcagccttcaagctaaaagaaattgcacggcgg
gagaaacagcaacgatggacaaggcgtgaacaaactgatttctatcgagtagtttctacc
tttggtgtggagtatgaccccgataccatgcagttccattgggatcgattccgcactttt
gcccgactggacaaaaaaacagatgaaagccttaccaagtatttccatggctttgtggcc
atgtgccgccaagtgtgccgccttcccccagcagctggagatgaacccccagaccctaat
ctgttcattgagcccatcactgaggaaagggcctcacggactctctaccgtattgaattg
cttcggcgcttacgggaacaagttttatgccaccctcttttggaagatcggctggcatta
tgtcagcctccaggtcctgaattgcctaaatggtgggagcccgttcggcatgatggggag
cttctacgaggggcagcccgccatggggtgagccaaacagactgcaacatcatgcaggac
ccagacttctcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagca
ccagctccatccctatcacgctgctctactccactgctacaccagcagtatacctcgcgc
actgcctcaccactgcccctgcgcccagatgctcctgttgaaaagccacctgaggagaca
gctgcccaggtccccagtctggagagtctgactttaaagctagagcatgaggtggtggcc
aggagccgaccaaccccacaagactatgagatgcgagtagccccctctgatactacccct
ctggtttcccggagtgttccaccagtcaaactggaggatgaggatgattcagactctgag
ctggacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagc
tccagcactgatgagagtgaggacgagaaggaagagaagctaactgctgaccggtcccgc
tcaaagctctatgatgaagaaagtctcctgtccctccctatgtcccaagatggattcgca
aatgaagatggagaacaaatgacccctgagctgctgctgctacaagaaagacaaagagct
tctgagtggcccaaggatcgtgtcctgataaaccgtattgacctcgtctgccaggccgta
ctctcagggaagtggccttctagccgccggagccaagaaatggtaacaggaggaattttg
gggtcaggcaaccacttgctagacagtccctcattgactccaggagaatatggtgactct
ccggtccccacaccacgaagtagcagcgcagcttccatggcagaggaggaagtgtccgcc
gtcaccacagcggcagctcagttcaccaaacttcgccgaggcatggatgagaaggagttt
acagttcagatcaaagatgaggaaggattgaagttaacattccagaagcacaagttgatg
gctaatggagtaatgggagatggacatcctctttttcataagaagaaagggaacagaaag
aagctagttgagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctg
gagacccggatccctgtcatcaataaggtggatgggactttgctggtgggtgaggatgcc
cctcgccgggctgaactggagatgtggttacagggtcatccagagttcgctgtcgatccc
cgatttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaat
aataaggcagaattgaactgtttgggaatggaaccagtacagacagctaactctaggaat
ggaaaaaggggtcatcatgctgaaacagtgttcaaccgggttatgccagggcctattgca
ccggacagcagcaagaagcgggcccgtaggatgcgaccagacctttctaagatgatggcc
ctgatgcagggtggaggcactgggtccctgtctctgcataataccttccaacacagcagt
agtggcctgcagtctgtgtcatctctgggtcacagcagtgccacttctgcgtctttgcct
tttatgccgtttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatg
cttcatcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctg
agagccactggctacccttcttcaccagccactaccacctctggtactgccttgaggttg
ccaccactgcaacctgaggaggatgaggacgatgaggatgaagatgatgatgatgattta
tctcagggctatgatagctcagaaagggacttctcactaattgatgatcctatgatgcca
gccaactcagactccagcgaagatggtgatgactga
DBGET
integrated database retrieval system
