Nicotiana attenuata (coyote tobacco): 109239421
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Entry
109239421 CDS
T05870
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
nau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109239421
03083 Polycomb repressive complex
109239421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109239421
Enzymes [BR:
nau01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109239421
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
109239421
HDAC complexes
Sin3A-HDAC complex
109239421
BRAF-HDAC complex
109239421
REST complex
109239421
SHIP complex
109239421
MiDAC complex
109239421
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109239421
Heterochromatin formation proteins
Other heterochromatin formation proteins
109239421
Chromatin remodeling factors
NuRD complex
109239421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
109239421
NCBI-ProteinID:
XP_019261532
UniProt:
A0A314L9H0
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MDTGGNSLPSGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMN
VLKPNPARDKDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGFGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPPHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSTLQHAPSVQFQERPPDTELPEADEDQEDADSRWDPDSDTND
EDRKPIPSRVRRENVEPEGKGAEDMKTEERLREVESTFAESTSLKGGNSGSVMIDGGQIK
MEQGSSNKPFDQPPDTNS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatactggaggaaactccttaccatctggtgcagatggtaagaagagaaaagtgagt
tatttctatgatcctgaagttggcaattactattatggacaaggccacccgatgaagccg
catagaatccgtatgacacatgctcttcttgcccactatggtctattacaacatatgaat
gttctgaagccaaatcccgctagagataaggatctttgccggtttcatgctgatgattat
gttgctttcttgagaagcataacccctgagacacaacaagatcagctgaggcagctgaag
aggttcaatgtcggggaagactgtccagtttttgatggtctttattccttctgtcaaacc
tatgctggaggttctgttggtggggcagttaagttaaaccatggacactgtgatattgcc
gtaaattgggctggtggattacatcatgccaagaaatgtgaagcttctggtttctgctat
gtgaacgacattgtgcttgccattttggagctactcaaagtccatgagagagttttgtat
gtggatattgatatccatcacggtgatggtgtggaggaggctttttataccacagatagg
gtcatgacagtttcctttcataaatttggagattactttcccggtacaggggatgtacgt
gatattggatttggaaagggaaaatactactctcttaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccgataatgggcaaagtgatggaagttttc
aagcctggtgctgtggtcttacaatgcggtgcagattccttatctggggataggctaggc
tgctttaatctctctattaaaggacatgcagaatgtgtcaaatacatgaggtctttcaat
gtgcctctgctgttgcttggtggaggaggctacacaatacgtaatgttgctcgttgctgg
tgttacgaaacaggagttgcattaggtatagagcttgaagataagatgccgccacatgaa
tattatgaatattttggtccagactataccctgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgataatctttcaaca
cttcagcatgccccaagtgtacagttccaggagcgaccaccagataccgaattacctgag
gctgatgaagatcaggaggatgcagattcaagatgggatcctgattctgacacaaatgac
gaagaccgtaagcccattcctagcagagtgaggagggaaaatgttgaacctgaaggaaaa
ggcgcggaagatatgaaaacagaggagcgcctaagagaagtagagtcgacatttgctgaa
tcaacaagcttgaagggtggcaattcaggttctgtaatgatagatggaggacagattaaa
atggaacaaggaagctctaacaagccttttgatcaaccacctgatactaattcttga
DBGET
integrated database retrieval system