Nicotiana attenuata (coyote tobacco): 109243790
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Entry
109243790 CDS
T05870
Name
(RefSeq) DNA ligase 6-like isoform X1
Organism
nau
Nicotiana attenuata (coyote tobacco)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Motif
Other DBs
NCBI-GeneID:
109243790
NCBI-ProteinID:
XP_019266326
UniProt:
A0A1J6J6Q3
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Position
2:6859067..6876594
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AA seq
1422 aa
AA seq
DB search
MSSEAGTLTLDSTTLYPTALNSLPGQSSSHSNPPPLPLPPIPPSVPQPKLIPKTRFIIDG
FKYAGDFSVSYFLSHFHSDHYTGLSPNWSKGIIFCSSITANLLIQVLNVPAQFVVSLPLS
EAVLIDGSEVFLSDANHCPGAVQFLFKIPVNYGKFERYIHTGDFRYCDKMKLEPVLNAFI
GADAVFLDTTYCNPKFIFPSQDESIDYIVGVIEKYGAENEGSLKNILFLIATYVIGKEKI
LVEVARRCKRKIHVDGRKIAVLKVLGHGEDGVFTTFESETDVHVVGWNVLGETWPYFRPN
FVKMNEIMNEKGYSKVVGFVPTGWTYEVKRSKFSVRKKDSFEIHLVPYSEHSNYDELRQY
VKFLKPKRVIPTVGIDVEKLDSKHANAMQKHFAGLVDEMAIKQEFLMGFHPCVQGEEDMD
AKESPHASVSITNQENTGESAHALVSITKQENEDTSLDSKICNNGDREDIIHSFPQGEPE
LQGLEKISEGDVEEDLKELKDCLPIWVTKDQMLDLLSISGKNIVDAVTNFYEHETEYRER
VTVSNSPTSSFEPNSLNGSALPFKPKGDEYMLSPKPWVGKSPQQGETTASNKTFKLPNMN
RSSCKTITPGKRKRSAENKSLKKARGNVSMEPGGSKQCTITKFFSKMAPPSATTSRNSHD
DNSMLLSASVESYIEEADRFIQIVNRDESLRSYAATVLAKTKGDISMALDIYFSEHKDVG
ETNGCGISESSKVVQPAKEVFPSSKDEKLPKKLGDDPDLSLSGIPLANTAVNYVSLPPEK
YSPLEHASWSKGQAAPYLHISRTFELVEEEKGKIRATSMLCNMFRSLLALSPEDVLPAVY
LCTNKIAPDHENMELNIGGSTVIAALEEACGTKRSKVRELYNSLGDLGDVAQLCRQTQSL
LAPPVALSIRGVYSILRRISLQAGSGSGVRKKSLIVNLMCSCREKEMKFLVRTLVRNLRI
GAMMRTVLPALAQAIVFNSVLYDGPVENMKENLQRLSAEVVEAYNILPSLDVLVPSLMEK
GIAFSSNTLSMDPGIPIKPMLAKITNGAPQVLKLFQNKAFTCEYKYDGQRAQIHKLADGS
VRVFSRNGDETTSRFPDLVNIITESCGPRGATFIVDAEVVAIDRKNGSKLMSFQELSSRE
RGTKDSIITLDKIKVEICIFVFDMMFANGKQLLHLPLRQRRKYLKDLFGDGKVGYFEYAT
EMTVESDDACADNEATLARMNSFLDDALRSSCEGIMVKSLDIDAGYTPSKRTDAWLKVKR
DYVEGLSDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPDTEEFQSVCRVMSGFSDSFYIE
MEEFFSGDKIFNKKPHYYRTAEVADMWFSPEVVWEIRGADFTVSPVHHAAIGSVHPSRGI
SVRFPRFIRCLSDRKPEECSTSADIADMFRSQTRKMDVNVEH
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaagccggaaccctaacccttgactctaccactctctacccaaccgctctc
aactccctccccggccaatcttcctcacattcaaatccaccacccctccctcttccccct
atccctccctcagtccctcaaccgaaactgattccaaaaactcgctttatcatcgacggt
ttcaaatatgccggcgatttctcagtttcatacttcctctctcatttccactccgatcac
tatactggcctttcccctaattggtccaaaggtatcatcttttgctcctccataaccgct
aaccttctcatccaagtcctcaatgttcccgcgcaatttgtagtgtctttaccgctttcc
gaagccgttttaatagacggctccgaggtatttctcagcgatgccaatcattgtcctggt
gctgtgcaatttttatttaaaattccagttaattatggcaaatttgagcggtatattcac
acaggtgattttcgttattgtgacaaaatgaaattagagcccgttttaaatgcatttatt
ggtgctgatgctgtatttttagatacaacttactgtaatccgaaatttatattccctagt
caagatgagtcaattgattatatagttggtgttatagagaaatatggagctgagaatgag
ggctcattgaaaaatatattgtttcttattgctacttatgttattgggaaggagaagatt
ttagtggaggttgcacggagatgtaagagaaagatccacgttgatggcaggaagatagca
gttttgaaggtattaggtcatggggaggatggggtgtttactacctttgaatctgaaact
gatgttcatgttgttgggtggaatgtgttgggtgagacttggccatatttcagacccaat
tttgtgaaaatgaacgagatcatgaatgagaaagggtattctaaggtggttggttttgtc
ccaaccggctggacttatgaagtgaagcgaagtaaattttcagtgaggaagaaagattcc
tttgagatacatcttgttccatatagtgaacattctaattacgatgagcttagacaatat
gtaaagtttctgaaaccaaagcgcgtcataccaacagtaggcatagatgttgagaagctg
gatagcaaacatgctaatgccatgcagaagcattttgctggcttggttgatgagatggcc
attaagcaagaatttctgatgggttttcatccttgtgtccaaggggaggaagatatggat
gcaaaagaatctcctcatgcttcagttagtatcaccaatcaagaaaacacaggcgaatct
gctcatgctttagtcagtatcaccaagcaagaaaatgaggatacttcattggattctaag
atctgcaataatggtgatagggaggatattatccattcatttcctcaaggagaacctgag
ttgcaaggtttagaaaaaataagtgaaggtgatgtggaagaagatctgaaagaacttaaa
gactgtttacccatttgggtcactaaagaccagatgttggatttacttagtatttcgggg
aaaaatattgttgatgcagtcactaacttctatgaacatgaaaccgaataccgcgaacgg
gtcactgtcagtaattctcctacctcttcctttgagccaaactcactaaatgggtctgca
ttgccttttaaaccaaaaggagatgaatatatgctgtctcccaaaccatgggttggtaaa
agcccgcagcagggtgaaacaactgcatcaaataaaacctttaaactgcccaacatgaac
cgttccagttgcaaaactattactccgggtaaaaggaagagaagtgctgaaaacaagtcg
cttaaaaaagcaagaggaaatgtaagtatggaacctggtggatcgaagcagtgtactata
acaaagttcttcagtaaaatggctcctccatctgcaactactagtagaaattcccacgat
gataacagtatgctactaagtgcctccgttgagtcttatatagaggaagctgatcggttt
attcagatcgtgaatagggatgagtcattaagaagttatgctgccacagtactagcaaag
actaaaggagacataagtatggcacttgatatttatttttcagaacacaaagatgttgga
gaaactaatggatgcgggatttctgaaagcagcaaagtggtgcaacctgctaaagaggtt
ttcccttcttccaaagatgagaagttgcccaaaaaattaggagatgacccggatttgtcc
ttgtctggaattcccttagcaaatactgctgtaaattatgtatcacttccacctgagaaa
tattctcctttggaacatgctagctggagcaaggggcaggctgctccatacctacatatt
tcacggacttttgaattggtagaggaagaaaaaggcaagataagagcaacatcaatgtta
tgcaatatgtttcggagcttgctggcattgtctcctgaggatgtgcttcctgcagtgtac
ttgtgcacaaacaagatagctcctgaccatgaaaatatggaattgaatattgggggcagt
actgttatagcagcactagaggaggcatgcgggacaaagagatcgaaagtacgagaacta
tataacagcctaggtgatcttggtgatgttgctcaactttgccgacaaacacaatcgtta
cttgctcctccagtggcactttcaattaggggtgtatactctattcttagaaggataagt
ttacaggcaggtagtgggagtggcgtccgaaagaaaagcctcattgtcaatctcatgtgt
tcatgtagggagaaggagatgaagtttcttgtcagaactttggttaggaatttgcggatt
ggagccatgatgagaactgttcttcctgcattagctcaagctattgtcttcaattctgtt
ctttatgatggaccagtcgaaaacatgaaagagaatctgcagcgactttcagcagaagta
gttgaagcatataacatccttcccagcttggatgtacttgttccttctttgatggaaaag
gggattgcgttttcctcaaatacgttgtcaatggatcccggcatacccatcaaaccaatg
cttgcaaaaattactaatggcgcccctcaagtgctgaagctcttccagaacaaagccttt
acatgcgagtacaaatatgatggtcagcgagctcaaattcataaattagctgatggttcg
gtccgtgtattttcacggaatggggatgaaacaacatctaggttccctgatttggtaaac
ataattacagaatcatgtggtcccagaggagcgacattcatagtggatgcagaggttgtt
gcaattgatagaaaaaatggttcaaagctcatgtcgttccaagaactatcttcgcgagag
agagggaccaaagattccatcatcacattagataaaattaaggttgagatatgcattttt
gtcttcgatatgatgtttgcaaatggaaaacaattgttgcatctgccactccgtcaaagg
cgaaaatacctgaaggatttatttggtgacggcaaagtgggttatttcgagtatgcgaca
gaaatgactgtagagtctgatgatgcttgtgcggataacgaagccacattggctaggatg
aacagctttcttgatgatgcgctacgttcttcttgtgaaggaatcatggtgaaatccctt
gatatagatgctgggtacacaccatcaaagcgcactgatgcatggttaaaggtcaagaga
gactacgtggaaggactaagtgattccttggacttggttccgattggtgcttggtatggg
aatggaaggaaagcgggatggtatagtcctttccttatggcctgctacaaccctgacact
gaggaattccagagtgtctgccgggtcatgtctgggttttctgattcattctacatagag
atggaggagttcttctctggggacaaaatcttcaacaaaaagccacattactatcgaact
gcagaagtggctgatatgtggttttctccagaagttgtgtgggagataaggggtgcggac
ttcacggtgtcaccagtgcatcatgcagccattggttcagtccatccatctcgtggtatc
tctgtcagattccctaggttcattcggtgtttgtcagatagaaaacctgaggaatgtagc
acatctgcagatatagccgacatgttccgctctcagactagaaaaatggatgtgaatgtt
gaacattga
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