Nocardioides sp. JS614: Noca_0024
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Entry
Noca_0024 CDS
T00443
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05364
penicillin-binding protein A
Organism
nca
Nocardioides sp. JS614
Pathway
nca00550
Peptidoglycan biosynthesis
nca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Noca_0024
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nca01011
]
Noca_0024
Peptidoglycan biosynthesis and degradation proteins [BR:
nca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Noca_0024
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABL79574
UniProt:
A1SCN9
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All DBs
Position
complement(26896..28368)
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AA seq
490 aa
AA seq
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MNKPIRTISMFCLLLFLALMLNATYLQYWKAGRLNDDPQNRRVLVESYSRERGAILVGNK
PVAESVESDDQYEFQRTYPKPLEYAPLTGWFSYYSATGIEQTRNAILSGDDSRLFVTKLV
DLLSNDSTKGGNVALTIDSKAQDAAYNGLKALGPNVQGSVVALQPSTGKVLAMVSLPTYD
PNKLASHDLGSVQDTFDRLDADPTQPLLNRAIQTRLPPGSTFKILTAAAAIDNGLYKADD
PVPGGATFQLPQTSGPTGEIDNEGRSCGANNARIPFTQALAQSCNTSFAQIAIEVGAEDM
AKTAEGFGFNSHYFDDLAPQAESVFPTDASEPEIGQSGIGQFEVAATPLQMAMVTAGIAN
GGTVMRPYLVDEEQSADLDVIQKTEPQKLSQAVSSSTASEVTKLMVATVNEGTASPAAMD
GFQVAGKTGTAQSGQPDKPPYAWFVSFAPAENPQVAVAVMIQAADIPRGEIAGGTYGGPI
AKAVMEAVIK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagccgatccggacgatctcgatgttctgcctgctgctgttcctggcgctgatg
ctgaacgcgacctacctgcagtactggaaggccggccggctcaacgacgacccgcagaac
cgacgggtgctggtggagtcgtactcccgcgagcgcggcgcgatcctggtcggcaacaag
ccggtggccgagagcgtcgagtccgacgaccagtacgagttccagcgcacctaccccaag
ccgctggagtacgcaccgctcaccggctggttcagctactacagcgcgaccgggatcgag
cagacccgcaacgcgatcctctccggcgacgactcgcggctgttcgtgaccaagctggtc
gacctgctgagcaacgactcgaccaagggcggcaacgtcgcgctgaccatcgactcgaag
gcccaggacgcggcgtacaacgggctcaaggcgctcggccccaacgtgcagggctccgtg
gtcgcgctccagcccagcaccggcaaggtcctggcgatggtctcgctgccgacctacgac
ccgaacaagctcgcctcccacgacctcggctcggtgcaggacaccttcgaccgcctcgac
gccgacccgacccagccgctgctcaaccgggccatccagacccggctgccgcccggctcg
acgttcaagatcctcaccgcggccgcggccatcgacaacggtctctacaaggcggacgac
ccggtgcccggcggcgccaccttccagctgccgcagaccagcgggcccaccggcgagatc
gacaacgagggccgctcgtgcggcgccaacaacgcccggatcccgttcacccaggcgctc
gcccagtcctgcaacacctccttcgcccagatcgcgatcgaggtcggcgccgaggacatg
gccaagaccgcggagggcttcggcttcaacagccactacttcgacgacctggcgccgcag
gcggagtcggtgttcccgaccgacgcgagcgagccggagatcggtcagtccggcatcgga
cagttcgaggtcgccgccacgccgctgcagatggcgatggtcaccgccggcatcgccaac
ggcggcaccgtgatgcggccctacctggtcgacgaggagcagtccgccgacctcgacgtg
atccagaagaccgagccgcagaagctctcccaggcggtctcgtcctcgacggcgagcgag
gtgaccaagctgatggtcgcgacggtgaacgagggcaccgcgagcccggcggcgatggac
ggcttccaggtggccggcaagaccggtaccgcgcagagcggccagccggacaagccgccg
tacgcctggttcgtctcgttcgcgcccgccgagaacccgcaggtagcggtcgcggtgatg
atccaggccgccgacatcccccgcggcgagatcgcgggcggcacctacggcggcccgatc
gccaaggccgtgatggaggcggtgatcaagtga
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