Nocardioides sp. JS614: Noca_1508
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Entry
Noca_1508 CDS
T00443
Name
(GenBank) UvrD/REP helicase
Organism
nca
Nocardioides sp. JS614
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABL81022
UniProt:
A1SGT7
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Position
1598940..1602122
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AA seq
1060 aa
AA seq
DB search
MRVPELDEHQRRVVDHPGGPLLVLAGPGTGKTTTLVEAIVDRIESRGAKPDEVLALTFSR
KAAEQLRDRVTARLGRTMSTTMSSTFHSFAYALIRRYSPAELYEAPLRLLSAPEQDVVLR
ELLTDHPESVVWPDSLARALGTRGFAREVHSVLSRAREKGLDGVALQALGEAEGLPEYVA
AGLFLDQYLTNLDSQGATDYADLIRRATIEAETHRDELRARIGAVFVDEYQDTDPGQVAL
LRALAGDGRDLVVVGDPHQSIYGFRGAEVRGILEFPTAFPRTDGAPADVVALRTTRRFGP
RLLIASQRVAGRLALPGSIPEEARSAFLAPEAQPNPLGDGRVLVRTFDTERAEAEHLADL
LRRAHLEDDVPWDQMAVLVRSGRTSIPPLRRALGAAGVPVEVASDEVPLVRDPAVLPLLD
ALRAVVDLDTRPDEGEVEHVAPENGWSLDPARAEGLLLGPLGGLDAGDLRRLARRLRTRE
KEQGKAEARTPRTSRDLVRRVVVEPGFLDGLDGPEVVRARALAQLLLDAREALRVGASAE
ELLWTLWSRTGWPARLRRSVDLGGGAARRAHRDLDSVCALFDVAARADEQRDHVGVRAFL
ATLVQQQIPADTLAERGARGAAVRLLTAHRAKGLEWRLVVVAHVQQDGWPDLRRRSTLLQ
ADRIGEHGVVPPVSTRELLMEERRLFYVACTRARQRLVVTAVASPDDEGEQPSRFLDELG
VGVERVVGRPPRPLSLPGLVAELRRTLADPETSEPLREAAARRLARLAPEVRIADPSSWW
GTRAATRSVEPIRDPGQPVPVSASVLEAVAVCPTQWFLEREAGGSARAHQSANLGELLHA
LAQRVAAGELEPAVEVLMEHVDAVWDRLDFRTPWSRAREHDRVRAAIGRFLQWHLANPRE
LIATEAPFTTVVALEGGEQVKISGYADRVELDADGHVVVVDLKSGRTKPSNRAVEGHVQL
GLYQYAVDHGALADLAPGAHAGGAELVQLGLTDGGEAAVVQAQDAQPEDGPARDDLRRRL
DHAAALLRAETFPAVAGQHCRDCSFVAICPIKSAGSVTAQ
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgttcccgagctcgacgagcaccagcgccgggtggtcgaccatcccggcgggccg
ctgctggtgctggccggccccggcaccggcaagaccacgaccctggtcgaggcgatcgtc
gaccgcatcgagtcccgcggtgccaagcccgacgaggtcctggcgctgacgttctcccgc
aaggccgccgagcagctgcgcgaccgggtcaccgcccggctgggacgcaccatgtcgacc
acgatgagctcgaccttccactccttcgcctacgcgctgatccggcgctactccccggcc
gagctctacgaggcgccgttgcggctgctgtcggcccccgagcaggacgtcgtgctccgc
gagctcctcaccgaccatcccgagtcggtcgtctggccggactcgctggcccgcgccctc
ggcacccgcggcttcgcccgcgaggtccactccgtgctgtcccgcgcgcgcgagaagggc
ctcgacggggtcgccctgcaggcgctcggcgaggccgagggcctgccggagtacgtcgcc
gcggggctcttcctcgaccagtacctcaccaacctcgactcccagggcgccaccgactac
gccgacctgatccgccgcgcgaccatcgaggccgagacccaccgcgacgagctccgagca
cggatcggtgcggtgttcgtcgacgagtaccaggacaccgaccccggccaggtcgcgctg
ctccgcgcgctggcgggcgacggtcgcgacctcgtcgtcgtgggtgacccgcaccagtcg
atctacgggttccggggcgcggaggtgcgcggcatcctcgagttccccactgcgttcccc
cgcaccgacggcgcgccggccgacgtggtcgcgctgcgcaccacccgccggttcgggccc
cggctgctgatcgcctcgcagcgggtcgcggggcggttggcgctgccgggcagcatcccc
gaggaggcgcgctcggcgttcctcgcgcccgaggcgcagcccaacccgctcggcgacggg
cgggtgctggtccgcaccttcgacaccgagcgtgccgaggccgagcacctcgccgacctg
ctccgccgggcccacctggaggacgacgtcccgtgggaccagatggcggtgctggtccgc
tcgggccgtacgtcgatcccgccgctgcgccgagcgctcggcgccgccggggtgccggtc
gaggtggccagcgacgaggtgccgctggtccgcgacccggcggtgctgccgctgctcgac
gccctgcgtgccgtggtcgacctcgacactcggccggacgagggcgaggtggagcacgtc
gccccggagaacgggtggagtctcgaccccgcgcgcgccgagggcttgctgctcggcccg
ctcggcgggctcgacgcgggtgacctgcgccgcctcgcgcgccggctgcggacccgcgag
aaggagcagggcaaggccgaggcccgcaccccgcgcacctcccgcgacctggtccgccgg
gtggtcgtcgagccgggcttcctcgacgggctggacggccccgaggtggtccgcgcccgg
gcgctcgcccagctcctgctcgacgcccgcgaggcgctgcgcgtcggcgcctcggccgag
gagctgctctggacgctgtggtcccgcaccggctggccggcccggctgcgccggtcggtc
gacctcggcggtggggcggcccgccgggcccaccgtgacctcgactcggtgtgcgcgctg
ttcgacgtcgccgcccgcgcggacgagcagcgcgaccacgtcggggtccgagccttcctc
gcgacgctcgtgcagcagcagatcccggccgacacgctcgccgaacggggcgcccgcggc
gccgccgtacgcctcctgaccgcccaccgcgccaagggcctggagtggcgactggtcgtc
gtcgcccacgtccagcaggacggctggccggacctgcggcgccgctcgacgctgctgcag
gccgaccggatcggtgagcacggcgtggtgccgccggtgtcgacccgcgagctgctgatg
gaggagcggcggctcttctacgtcgcctgcacccgcgcccggcagcggctggtcgtcacc
gcggtcgcgtcgcccgacgacgagggcgagcagccgtcccggttcctcgacgagctcggg
gtgggcgtcgagcgcgtcgtcggccggccgccgcggccgctctcgctccccgggctggtc
gccgagctgcgccgtacgctcgccgaccccgagacctccgagccgctccgcgaggccgcc
gcccgccggctcgcgcggttggcgcccgaggtccggatcgccgatccgtcgagctggtgg
ggcacccgcgccgccacccgctcggtcgagccgatccgcgaccccggccagccggtgccg
gtctcggcgagcgtgctcgaggcggtcgcggtctgcccgacccagtggttcctcgagcgc
gaggccggcggcagcgcgcgcgcccaccagtccgcgaacctcggcgagctgctccacgca
ctcgcccagcgggtcgcggccggtgagctcgagcccgcggtcgaggtcctcatggagcac
gtcgacgcggtgtgggaccggctcgacttccgcacgccctggtcgagggcgcgcgagcac
gaccgggtccgcgcggcgatcggccggttcctccagtggcacctcgccaacccgcgcgag
ctgatcgccaccgaggcgccgttcaccaccgtcgtggcgctcgagggcggcgagcaggtc
aagatcagcggctacgccgaccgggtcgagctcgacgcggacggccacgtcgtcgtggtc
gacctcaagtccgggcgcaccaagcccagcaacagggcggtcgagggccacgtccagctc
ggcctctaccagtacgccgtcgaccacggcgccctcgccgacctcgcacccggcgcccat
gccggcggcgcggagctcgtccagctcggcctgaccgacggcggcgaggccgctgtcgtc
caggcgcaggacgcccagcccgaggacggcccggcgcgcgacgacctccgccggcggctc
gaccatgccgccgccctgctgcgcgccgagacgttcccggcggtcgccggccagcactgc
cgcgactgcagcttcgtcgcgatctgcccgatcaagagtgccgggtcggtgaccgcccaa
tga
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